RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 PGLYRP2Q96PD5 576 aa18.01■□□□□ 0.47
SYNE4-207ENST00000505054 PKMYT1Q99640 499 aa18.01■□□□□ 0.47
SYNE4-207ENST00000505054 FUCA2Q9BTY2 467 aa18.01■□□□□ 0.47
SYNE4-207ENST00000505054 IMPG2Q9BZV3 1241 aa18.01■□□□□ 0.47
SYNE4-207ENST00000505054 CRISPLD1Q9H336 500 aa18.01■□□□□ 0.47
SYNE4-207ENST00000505054 RAB20Q9NX57 234 aa18.01■□□□□ 0.47
SYNE4-207ENST00000505054 DLGAP2Q9P1A6 1054 aa18.01■□□□□ 0.47
SYNE4-207ENST00000505054 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.01■□□□□ 0.47
SYNE4-207ENST00000505054 NUMBLQ9Y6R0 609 aa18.01■□□□□ 0.47
SYNE4-207ENST00000505054 MTMR11A4FU01 709 aa18■□□□□ 0.47
SYNE4-207ENST00000505054 PMM2O15305 246 aa18■□□□□ 0.47
SYNE4-207ENST00000505054 FAM163BP0C2L3 166 aa18■□□□□ 0.47
SYNE4-207ENST00000505054 LMO2P25791 158 aa18■□□□□ 0.47
SYNE4-207ENST00000505054 CDR1P51861 262 aa18■□□□□ 0.47
SYNE4-207ENST00000505054 CDH8P55286 799 aa18■□□□□ 0.47
SYNE4-207ENST00000505054 KCNH2Q12809 1159 aa18■□□□□ 0.47
SYNE4-207ENST00000505054 NFKBIBQ15653 356 aa18■□□□□ 0.47
SYNE4-207ENST00000505054 SKOR2Q2VWA4 1001 aaPredicted RBP18■□□□□ 0.47
SYNE4-207ENST00000505054 SLC39A12Q504Y0 691 aa18■□□□□ 0.47
SYNE4-207ENST00000505054 HSP90AA4PQ58FG1 418 aa18■□□□□ 0.47
SYNE4-207ENST00000505054 INTS6LQ5JSJ4 861 aaKnown RBP18■□□□□ 0.47
SYNE4-207ENST00000505054 TCEAL8Q8IYN2 117 aa18■□□□□ 0.47
SYNE4-207ENST00000505054 ATAD1Q8NBU5 361 aa18■□□□□ 0.47
SYNE4-207ENST00000505054 ACBD6Q9BR61 282 aa18■□□□□ 0.47
SYNE4-207ENST00000505054 BCO2Q9BYV7 579 aa18■□□□□ 0.47
SYNE4-207ENST00000505054 NIF3L1Q9GZT8 377 aa18■□□□□ 0.47
SYNE4-207ENST00000505054 SAMSN1Q9NSI8 373 aaKnown RBP18■□□□□ 0.47
SYNE4-207ENST00000505054 TMLHEQ9NVH6 421 aa18■□□□□ 0.47
SYNE4-207ENST00000505054 SIT1Q9Y3P8 196 aa18■□□□□ 0.47
SYNE4-207ENST00000505054 NFE2L3Q9Y4A8 694 aa18■□□□□ 0.47
SYNE4-207ENST00000505054 R4GN57 208 aa18■□□□□ 0.47
SYNE4-207ENST00000505054 SYCE3A1L190 88 aa17.99■□□□□ 0.47
SYNE4-207ENST00000505054 AFPP02771 609 aaKnown RBP17.99■□□□□ 0.47
SYNE4-207ENST00000505054 DCNP07585 359 aaKnown RBP17.99■□□□□ 0.47
SYNE4-207ENST00000505054 P4HA1P13674 534 aa17.99■□□□□ 0.47
SYNE4-207ENST00000505054 FSHRP23945 695 aa17.99■□□□□ 0.47
SYNE4-207ENST00000505054 PCSK1P29120 753 aa17.99■□□□□ 0.47
SYNE4-207ENST00000505054 TSPY1Q01534 308 aa17.99■□□□□ 0.47
SYNE4-207ENST00000505054 ANO6Q4KMQ2 910 aa17.99■□□□□ 0.47
SYNE4-207ENST00000505054 TTC9BQ8N6N2 239 aa17.99■□□□□ 0.47
SYNE4-207ENST00000505054 PJA1Q8NG27 643 aa17.99■□□□□ 0.47
SYNE4-207ENST00000505054 SYT15Q9BQS2 421 aa17.99■□□□□ 0.47
SYNE4-207ENST00000505054 CYP4F11Q9HBI6 524 aa17.99■□□□□ 0.47
SYNE4-207ENST00000505054 MAFFQ9ULX9 164 aa17.99■□□□□ 0.47
SYNE4-207ENST00000505054 INSL5Q9Y5Q6 135 aa17.99■□□□□ 0.47
SYNE4-207ENST00000505054 OTOGLQ3ZCN5 2332 aa17.99■□□□□ 0.47
SYNE4-207ENST00000505054 CACNA1IQ9P0X4 2223 aa17.98■□□□□ 0.47
SYNE4-207ENST00000505054 PRRG1O14668 218 aa17.98■□□□□ 0.47
SYNE4-207ENST00000505054 P4HA2O15460 535 aa17.98■□□□□ 0.47
SYNE4-207ENST00000505054 ATP2C2O75185 946 aa17.98■□□□□ 0.47
SYNE4-207ENST00000505054 PDGFRBP09619 1106 aa17.98■□□□□ 0.47
SYNE4-207ENST00000505054 HNRNPA1P09651 372 aaKnown RBP eCLIP17.98■□□□□ 0.47
SYNE4-207ENST00000505054 SP9P0CG40 484 aa17.98■□□□□ 0.47
SYNE4-207ENST00000505054 HOXA9P31269 272 aa17.98■□□□□ 0.47
SYNE4-207ENST00000505054 ELF1P32519 619 aa17.98■□□□□ 0.47
SYNE4-207ENST00000505054 GNL1P36915 607 aaPredicted RBP17.98■□□□□ 0.47
SYNE4-207ENST00000505054 PSMC1P62191 440 aaKnown RBP17.98■□□□□ 0.47
SYNE4-207ENST00000505054 UVSSAQ2YD98 709 aa17.98■□□□□ 0.47
SYNE4-207ENST00000505054 PPM1LQ5SGD2 360 aa17.98■□□□□ 0.47
SYNE4-207ENST00000505054 CDKAL1Q5VV42 579 aa17.98■□□□□ 0.47
SYNE4-207ENST00000505054 CREBRFQ8IUR6 639 aa17.98■□□□□ 0.47
SYNE4-207ENST00000505054 FAM114A1Q8IWE2 563 aa17.98■□□□□ 0.47
SYNE4-207ENST00000505054 DCP1BQ8IZD4 617 aaKnown RBP17.98■□□□□ 0.47
SYNE4-207ENST00000505054 CCDC150Q8NCX0 1101 aa17.98■□□□□ 0.47
SYNE4-207ENST00000505054 OR6B3Q8NGW1 331 aa17.98■□□□□ 0.47
SYNE4-207ENST00000505054 SHDQ96IW2 340 aa17.98■□□□□ 0.47
SYNE4-207ENST00000505054 SNX25Q9H3E2 840 aa17.98■□□□□ 0.47
SYNE4-207ENST00000505054 DPEP3Q9H4B8 488 aa17.98■□□□□ 0.47
SYNE4-207ENST00000505054 CRTAC1Q9NQ79 661 aa17.98■□□□□ 0.47
SYNE4-207ENST00000505054 HMGXB4Q9UGU5 601 aa17.98■□□□□ 0.47
SYNE4-207ENST00000505054 CDH9Q9ULB4 789 aa17.98■□□□□ 0.47
SYNE4-207ENST00000505054 YIPF1Q9Y548 306 aa17.98■□□□□ 0.47
SYNE4-207ENST00000505054 WDR87Q6ZQQ6 2873 aa17.98■□□□□ 0.47
SYNE4-207ENST00000505054 MYBPHLA2RUH7 354 aa17.97■□□□□ 0.47
SYNE4-207ENST00000505054 CCL16O15467 120 aa17.97■□□□□ 0.47
SYNE4-207ENST00000505054 LETM1O95202 739 aaPredicted RBP17.97■□□□□ 0.47
SYNE4-207ENST00000505054 POU2F2P09086 479 aa17.97■□□□□ 0.47
SYNE4-207ENST00000505054 MTIF2P46199 727 aaKnown RBP17.97■□□□□ 0.47
SYNE4-207ENST00000505054 STARD6P59095 220 aa17.97■□□□□ 0.47
SYNE4-207ENST00000505054 MYL5Q02045 173 aa17.97■□□□□ 0.47
SYNE4-207ENST00000505054 DUSP4Q13115 394 aa17.97■□□□□ 0.47
SYNE4-207ENST00000505054 NCAPHQ15003 741 aa17.97■□□□□ 0.47
SYNE4-207ENST00000505054 FAM171BQ6P995 826 aa17.97■□□□□ 0.47
SYNE4-207ENST00000505054 RTL10Q7L3V2 364 aa17.97■□□□□ 0.47
SYNE4-207ENST00000505054 GRASPQ7Z6J2 395 aaPredicted RBP17.97■□□□□ 0.47
SYNE4-207ENST00000505054 C1orf210Q8IVY1 113 aa17.97■□□□□ 0.47
SYNE4-207ENST00000505054 LMO3Q8TAP4 145 aa17.97■□□□□ 0.47
SYNE4-207ENST00000505054 FGF14Q92915 247 aa17.97■□□□□ 0.47
SYNE4-207ENST00000505054 TATDN2Q93075 761 aa17.97■□□□□ 0.47
SYNE4-207ENST00000505054 ARID3AQ99856 593 aa17.97■□□□□ 0.47
SYNE4-207ENST00000505054 MAGEC2Q9UBF1 373 aaPredicted RBP17.97■□□□□ 0.47
SYNE4-207ENST00000505054 GTF3C4Q9UKN8 822 aa17.97■□□□□ 0.47
SYNE4-207ENST00000505054 CDH7Q9ULB5 785 aa17.97■□□□□ 0.47
SYNE4-207ENST00000505054 COL4A3Q01955 1670 aa17.96■□□□□ 0.47
SYNE4-207ENST00000505054 NOTCH4Q99466 2003 aa17.96■□□□□ 0.47
SYNE4-207ENST00000505054 A8MXQ7 604 aa17.96■□□□□ 0.47
SYNE4-207ENST00000505054 KCNJ18B7U540 433 aa17.96■□□□□ 0.47
SYNE4-207ENST00000505054 INCA1Q0VD86 236 aa17.96■□□□□ 0.47
SYNE4-207ENST00000505054 SMARCB1Q12824 385 aa17.96■□□□□ 0.47
SYNE4-207ENST00000505054 KCNJ12Q14500 433 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms