RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 PDGFRBP09619 1106 aa10.48□□□□□ -0.73
NR1I3-220ENST00000505005 TRIM49P0CI25 452 aa10.48□□□□□ -0.73
NR1I3-220ENST00000505005 TRIM49CP0CI26 452 aa10.48□□□□□ -0.73
NR1I3-220ENST00000505005 BMP6P22004 513 aa10.48□□□□□ -0.73
NR1I3-220ENST00000505005 PSEN1P49768 467 aa10.48□□□□□ -0.73
NR1I3-220ENST00000505005 MFAP3P55082 362 aa10.48□□□□□ -0.73
NR1I3-220ENST00000505005 SNX16P57768 344 aa10.48□□□□□ -0.73
NR1I3-220ENST00000505005 RBM10P98175 930 aaKnown RBP10.48□□□□□ -0.73
NR1I3-220ENST00000505005 CYP27A1Q02318 531 aa10.48□□□□□ -0.73
NR1I3-220ENST00000505005 PPP3CAQ08209 521 aa10.48□□□□□ -0.73
NR1I3-220ENST00000505005 MAN2A1Q16706 1144 aa10.48□□□□□ -0.73
NR1I3-220ENST00000505005 KLHL40Q2TBA0 621 aa10.48□□□□□ -0.73
NR1I3-220ENST00000505005 GBP6Q6ZN66 633 aa10.48□□□□□ -0.73
NR1I3-220ENST00000505005 DENND5BQ6ZUT9 1274 aa10.48□□□□□ -0.73
NR1I3-220ENST00000505005 TADA2BQ86TJ2 420 aa10.48□□□□□ -0.73
NR1I3-220ENST00000505005 ATAD1Q8NBU5 361 aa10.48□□□□□ -0.73
NR1I3-220ENST00000505005 EHBP1Q8NDI1 1231 aa10.48□□□□□ -0.73
NR1I3-220ENST00000505005 TAS1R2Q8TE23 839 aa10.48□□□□□ -0.73
NR1I3-220ENST00000505005 KBTBD7Q8WVZ9 684 aa10.48□□□□□ -0.73
NR1I3-220ENST00000505005 EDAQ92838 391 aa10.48□□□□□ -0.73
NR1I3-220ENST00000505005 ERCC4Q92889 916 aaPredicted RBP10.48□□□□□ -0.73
NR1I3-220ENST00000505005 FGF13Q92913 245 aa10.48□□□□□ -0.73
NR1I3-220ENST00000505005 MSANTD3Q96H12 275 aa10.48□□□□□ -0.73
NR1I3-220ENST00000505005 PGLYRP2Q96PD5 576 aa10.48□□□□□ -0.73
NR1I3-220ENST00000505005 CDK5RAP1Q96SZ6 601 aaKnown RBP10.48□□□□□ -0.73
NR1I3-220ENST00000505005 DUSP9Q99956 384 aaKnown RBP10.48□□□□□ -0.73
NR1I3-220ENST00000505005 MED10Q9BTT4 135 aa10.48□□□□□ -0.73
NR1I3-220ENST00000505005 MMRN2Q9H8L6 949 aa10.48□□□□□ -0.73
NR1I3-220ENST00000505005 TRPV4Q9HBA0 871 aa10.48□□□□□ -0.73
NR1I3-220ENST00000505005 DMAP1Q9NPF5 467 aaPredicted RBP10.48□□□□□ -0.73
NR1I3-220ENST00000505005 TMEM51Q9NW97 253 aa10.48□□□□□ -0.73
NR1I3-220ENST00000505005 HESX1Q9UBX0 185 aa10.48□□□□□ -0.73
NR1I3-220ENST00000505005 C2CD4DB7Z1M9 353 aa10.47□□□□□ -0.73
NR1I3-220ENST00000505005 MED7O43513 233 aa10.47□□□□□ -0.73
NR1I3-220ENST00000505005 GPR37L1O60883 481 aa10.47□□□□□ -0.73
NR1I3-220ENST00000505005 PAEPP09466 180 aa10.47□□□□□ -0.73
NR1I3-220ENST00000505005 MYL4P12829 197 aa10.47□□□□□ -0.73
NR1I3-220ENST00000505005 GLULP15104 373 aa10.47□□□□□ -0.73
NR1I3-220ENST00000505005 CD44P16070 742 aaKnown RBP10.47□□□□□ -0.73
NR1I3-220ENST00000505005 PMS1P54277 932 aaKnown RBP10.47□□□□□ -0.73
NR1I3-220ENST00000505005 MLLT6P55198 1093 aaPredicted RBP10.47□□□□□ -0.73
NR1I3-220ENST00000505005 STX17P56962 302 aa10.47□□□□□ -0.73
NR1I3-220ENST00000505005 BPIFB4P59827 614 aa10.47□□□□□ -0.73
NR1I3-220ENST00000505005 SIGLEC14Q08ET2 396 aa10.47□□□□□ -0.73
NR1I3-220ENST00000505005 GET4Q7L5D6 327 aaPredicted RBP10.47□□□□□ -0.73
NR1I3-220ENST00000505005 BMP8AQ7Z5Y6 402 aa10.47□□□□□ -0.73
NR1I3-220ENST00000505005 DDX42Q86XP3 938 aaKnown RBP eCLIP10.47□□□□□ -0.73
NR1I3-220ENST00000505005 CREBRFQ8IUR6 639 aa10.47□□□□□ -0.73
NR1I3-220ENST00000505005 SCN4BQ8IWT1 228 aa10.47□□□□□ -0.73
NR1I3-220ENST00000505005 NUP93Q8N1F7 819 aa10.47□□□□□ -0.73
NR1I3-220ENST00000505005 PLEKHO2Q8TD55 490 aa10.47□□□□□ -0.73
NR1I3-220ENST00000505005 IRF7Q92985 503 aa10.47□□□□□ -0.73
NR1I3-220ENST00000505005 ELSPBP1Q96BH3 223 aa10.47□□□□□ -0.73
NR1I3-220ENST00000505005 PCED1BQ96HM7 432 aa10.47□□□□□ -0.73
NR1I3-220ENST00000505005 TMEM176AQ96HP8 235 aa10.47□□□□□ -0.73
NR1I3-220ENST00000505005 CNOT6LQ96LI5 555 aaKnown RBP10.47□□□□□ -0.73
NR1I3-220ENST00000505005 NELL2Q99435 816 aa10.47□□□□□ -0.73
NR1I3-220ENST00000505005 HNRNPABQ99729 332 aaKnown RBP10.47□□□□□ -0.73
NR1I3-220ENST00000505005 RTP3Q9BQQ7 232 aa10.47□□□□□ -0.73
NR1I3-220ENST00000505005 PI4K2AQ9BTU6 479 aa10.47□□□□□ -0.73
NR1I3-220ENST00000505005 GZF1Q9H116 711 aaPredicted RBP10.47□□□□□ -0.73
NR1I3-220ENST00000505005 IRF2BPLQ9H1B7 796 aa10.47□□□□□ -0.73
NR1I3-220ENST00000505005 KCNH6Q9H252 994 aa10.47□□□□□ -0.73
NR1I3-220ENST00000505005 ATXN3LQ9H3M9 355 aa10.47□□□□□ -0.73
NR1I3-220ENST00000505005 SLITRK6Q9H5Y7 841 aa10.47□□□□□ -0.73
NR1I3-220ENST00000505005 TASP1Q9H6P5 420 aa10.47□□□□□ -0.73
NR1I3-220ENST00000505005 TRPV5Q9NQA5 729 aa10.47□□□□□ -0.73
NR1I3-220ENST00000505005 TRPM5Q9NZQ8 1165 aa10.47□□□□□ -0.73
NR1I3-220ENST00000505005 WNT16Q9UBV4 365 aa10.47□□□□□ -0.73
NR1I3-220ENST00000505005 SLC27A5Q9Y2P5 690 aa10.47□□□□□ -0.73
NR1I3-220ENST00000505005 MYBPHLA2RUH7 354 aa10.46□□□□□ -0.73
NR1I3-220ENST00000505005 ANHXE9PGG2 379 aa10.46□□□□□ -0.73
NR1I3-220ENST00000505005 CILPO75339 1184 aa10.46□□□□□ -0.73
NR1I3-220ENST00000505005 NOL4O94818 638 aa10.46□□□□□ -0.73
NR1I3-220ENST00000505005 OR4Q2P0C623 313 aa10.46□□□□□ -0.73
NR1I3-220ENST00000505005 FAM200BP0CF97 657 aa10.46□□□□□ -0.73
NR1I3-220ENST00000505005 VDRP11473 427 aa10.46□□□□□ -0.73
NR1I3-220ENST00000505005 SRFP11831 508 aa10.46□□□□□ -0.73
NR1I3-220ENST00000505005 CDK11BP21127 795 aaKnown RBP10.46□□□□□ -0.73
NR1I3-220ENST00000505005 IGFBP6P24592 240 aaPredicted RBP10.46□□□□□ -0.73
NR1I3-220ENST00000505005 LMO2P25791 158 aa10.46□□□□□ -0.73
NR1I3-220ENST00000505005 GABRR2P28476 465 aa10.46□□□□□ -0.73
NR1I3-220ENST00000505005 AVPR1AP37288 418 aa10.46□□□□□ -0.73
NR1I3-220ENST00000505005 ASPAP45381 313 aa10.46□□□□□ -0.73
NR1I3-220ENST00000505005 NDST1P52848 882 aa10.46□□□□□ -0.73
NR1I3-220ENST00000505005 ZXDAP98168 799 aa10.46□□□□□ -0.73
NR1I3-220ENST00000505005 MYL5Q02045 173 aa10.46□□□□□ -0.73
NR1I3-220ENST00000505005 CUL2Q13617 745 aa10.46□□□□□ -0.73
NR1I3-220ENST00000505005 MEA1Q16626 185 aa10.46□□□□□ -0.73
NR1I3-220ENST00000505005 EXOC3L4Q17RC7 722 aa10.46□□□□□ -0.73
NR1I3-220ENST00000505005 MDH1BQ5I0G3 518 aa10.46□□□□□ -0.73
NR1I3-220ENST00000505005 C1orf220Q5T0J3 134 aa10.46□□□□□ -0.73
NR1I3-220ENST00000505005 FKBP15Q5T1M5 1219 aa10.46□□□□□ -0.73
NR1I3-220ENST00000505005 LRRTM3Q86VH5 581 aa10.46□□□□□ -0.73
NR1I3-220ENST00000505005 YAF2Q8IY57 180 aa10.46□□□□□ -0.73
NR1I3-220ENST00000505005 ARHGAP18Q8N392 663 aa10.46□□□□□ -0.73
NR1I3-220ENST00000505005 CCDC26Q8TAB7 109 aa10.46□□□□□ -0.73
NR1I3-220ENST00000505005 GPT2Q8TD30 523 aa10.46□□□□□ -0.73
NR1I3-220ENST00000505005 SMARCD2Q92925 531 aa10.46□□□□□ -0.73
NR1I3-220ENST00000505005 MYLPFQ96A32 169 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms