RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 GOLPH3Q9H4A6 298 aa11.02□□□□□ -0.65
TPM3-217ENST00000504663 L2HGDHQ9H9P8 463 aa11.02□□□□□ -0.65
TPM3-217ENST00000504663 TMLHEQ9NVH6 421 aa11.02□□□□□ -0.65
TPM3-217ENST00000504663 DDX43Q9NXZ2 648 aaKnown RBP11.02□□□□□ -0.65
TPM3-217ENST00000504663 CXXC1Q9P0U4 656 aaPredicted RBP11.02□□□□□ -0.65
TPM3-217ENST00000504663 PUF60Q9UHX1 559 aaKnown RBP11.02□□□□□ -0.65
TPM3-217ENST00000504663 DNAI1Q9UI46 699 aa11.02□□□□□ -0.65
TPM3-217ENST00000504663 KIAA1257Q9ULG3 409 aa11.02□□□□□ -0.65
TPM3-217ENST00000504663 R3HCC1Q9Y3T6 440 aaKnown RBP11.02□□□□□ -0.65
TPM3-217ENST00000504663 PLXNA3P51805 1871 aa11.02□□□□□ -0.65
TPM3-217ENST00000504663 MYBPHLA2RUH7 354 aa11.01□□□□□ -0.65
TPM3-217ENST00000504663 M0QYV0 167 aa11.01□□□□□ -0.65
TPM3-217ENST00000504663 MED7O43513 233 aa11.01□□□□□ -0.65
TPM3-217ENST00000504663 TBC1D4O60343 1298 aa11.01□□□□□ -0.65
TPM3-217ENST00000504663 BUB1BO60566 1050 aaPredicted RBP11.01□□□□□ -0.65
TPM3-217ENST00000504663 PALMO75781 387 aa11.01□□□□□ -0.65
TPM3-217ENST00000504663 GJB6O95452 261 aa11.01□□□□□ -0.65
TPM3-217ENST00000504663 TUBB4AP04350 444 aa11.01□□□□□ -0.65
TPM3-217ENST00000504663 ERBB2P04626 1255 aa11.01□□□□□ -0.65
TPM3-217ENST00000504663 PTPN1P18031 435 aaKnown RBP11.01□□□□□ -0.65
TPM3-217ENST00000504663 FGFR3P22607 806 aa11.01□□□□□ -0.65
TPM3-217ENST00000504663 NSFP46459 744 aaKnown RBP11.01□□□□□ -0.65
TPM3-217ENST00000504663 OR1G1P47890 313 aa11.01□□□□□ -0.65
TPM3-217ENST00000504663 LHX1P48742 406 aa11.01□□□□□ -0.65
TPM3-217ENST00000504663 GPC5P78333 572 aa11.01□□□□□ -0.65
TPM3-217ENST00000504663 HTRA4P83105 476 aaPredicted RBP11.01□□□□□ -0.65
TPM3-217ENST00000504663 STILQ15468 1287 aa11.01□□□□□ -0.65
TPM3-217ENST00000504663 RASIP1Q5U651 963 aa11.01□□□□□ -0.65
TPM3-217ENST00000504663 DSTYKQ6XUX3 929 aa11.01□□□□□ -0.65
TPM3-217ENST00000504663 LRRTM3Q86VH5 581 aa11.01□□□□□ -0.65
TPM3-217ENST00000504663 XYLT1Q86Y38 959 aa11.01□□□□□ -0.65
TPM3-217ENST00000504663 C7orf61Q8IZ16 206 aa11.01□□□□□ -0.65
TPM3-217ENST00000504663 TMEM35BQ8NCS4 154 aa11.01□□□□□ -0.65
TPM3-217ENST00000504663 ZMIZ2Q8NF64 920 aa11.01□□□□□ -0.65
TPM3-217ENST00000504663 UBA3Q8TBC4 463 aa11.01□□□□□ -0.65
TPM3-217ENST00000504663 CTNNBL1Q8WYA6 563 aaPredicted RBP11.01□□□□□ -0.65
TPM3-217ENST00000504663 PIWIL1Q96J94 861 aaKnown RBP11.01□□□□□ -0.65
TPM3-217ENST00000504663 VCPIP1Q96JH7 1222 aa11.01□□□□□ -0.65
TPM3-217ENST00000504663 HEXIM2Q96MH2 286 aaKnown RBP11.01□□□□□ -0.65
TPM3-217ENST00000504663 HNRNPABQ99729 332 aaKnown RBP11.01□□□□□ -0.65
TPM3-217ENST00000504663 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.01□□□□□ -0.65
TPM3-217ENST00000504663 TLR10Q9BXR5 811 aa11.01□□□□□ -0.65
TPM3-217ENST00000504663 SLC4A5Q9BY07 1137 aa11.01□□□□□ -0.65
TPM3-217ENST00000504663 SNX25Q9H3E2 840 aa11.01□□□□□ -0.65
TPM3-217ENST00000504663 LUC7LQ9NQ29 371 aaKnown RBP11.01□□□□□ -0.65
TPM3-217ENST00000504663 CNOT8Q9UFF9 292 aaKnown RBP11.01□□□□□ -0.65
TPM3-217ENST00000504663 ADAM28Q9UKQ2 775 aa11.01□□□□□ -0.65
TPM3-217ENST00000504663 LRFN2Q9ULH4 789 aa11.01□□□□□ -0.65
TPM3-217ENST00000504663 ATG2AQ2TAZ0 1938 aa11.01□□□□□ -0.65
TPM3-217ENST00000504663 GREB1Q4ZG55 1949 aa11□□□□□ -0.65
TPM3-217ENST00000504663 NCK2O43639 380 aa11□□□□□ -0.65
TPM3-217ENST00000504663 EFCAB14O75071 495 aa11□□□□□ -0.65
TPM3-217ENST00000504663 BEST1O76090 585 aa11□□□□□ -0.65
TPM3-217ENST00000504663 UPP2O95045 317 aa11□□□□□ -0.65
TPM3-217ENST00000504663 OAZ2O95190 189 aa11□□□□□ -0.65
TPM3-217ENST00000504663 VNN2O95498 520 aa11□□□□□ -0.65
TPM3-217ENST00000504663 AMHP03971 560 aa11□□□□□ -0.65
TPM3-217ENST00000504663 SETSIPP0DME0 302 aa11□□□□□ -0.65
TPM3-217ENST00000504663 MYBL1P10243 752 aa11□□□□□ -0.65
TPM3-217ENST00000504663 BCAR1P56945 870 aa11□□□□□ -0.65
TPM3-217ENST00000504663 PLCB3Q01970 1234 aa11□□□□□ -0.65
TPM3-217ENST00000504663 OGDHQ02218 1023 aa11□□□□□ -0.65
TPM3-217ENST00000504663 PDE4CQ08493 712 aa11□□□□□ -0.65
TPM3-217ENST00000504663 PPIGQ13427 754 aaKnown RBP eCLIP11□□□□□ -0.658e-7■□□□□ 10.5
TPM3-217ENST00000504663 MAMLD1Q13495 774 aa11□□□□□ -0.65
TPM3-217ENST00000504663 MDH1BQ5I0G3 518 aa11□□□□□ -0.65
TPM3-217ENST00000504663 INTS6LQ5JSJ4 861 aaKnown RBP11□□□□□ -0.65
TPM3-217ENST00000504663 PAPD7Q5XG87 772 aaKnown RBP11□□□□□ -0.65
TPM3-217ENST00000504663 TRNP1Q6NT89 227 aa11□□□□□ -0.65
TPM3-217ENST00000504663 C11orf63Q6NUN7 778 aa11□□□□□ -0.65
TPM3-217ENST00000504663 PMF1Q6P1K2 205 aa11□□□□□ -0.65
TPM3-217ENST00000504663 FUT10Q6P4F1 479 aa11□□□□□ -0.65
TPM3-217ENST00000504663 RSPO2Q6UXX9 243 aaPredicted RBP11□□□□□ -0.65
TPM3-217ENST00000504663 ZNF365Q70YC5 407 aa11□□□□□ -0.65
TPM3-217ENST00000504663 TAS1R1Q7RTX1 841 aa11□□□□□ -0.65
TPM3-217ENST00000504663 FAM35AQ86V20 835 aa11□□□□□ -0.65
TPM3-217ENST00000504663 RHOT2Q8IXI1 618 aa11□□□□□ -0.65
TPM3-217ENST00000504663 TXLNBQ8N3L3 684 aa11□□□□□ -0.65
TPM3-217ENST00000504663 PIP4P2Q8N4L2 257 aa11□□□□□ -0.65
TPM3-217ENST00000504663 EFCAB3Q8N7B9 438 aa11□□□□□ -0.65
TPM3-217ENST00000504663 ANKRD52Q8NB46 1076 aa11□□□□□ -0.65
TPM3-217ENST00000504663 TRIM58Q8NG06 486 aa11□□□□□ -0.65
TPM3-217ENST00000504663 MYCBPAPQ8TBZ2 947 aa11□□□□□ -0.65
TPM3-217ENST00000504663 ZNF564Q8TBZ8 553 aaPredicted RBP11□□□□□ -0.65
TPM3-217ENST00000504663 SLC2A14Q8TDB8 520 aa11□□□□□ -0.65
TPM3-217ENST00000504663 KHSRPQ92945 711 aaKnown RBP eCLIP11□□□□□ -0.65
TPM3-217ENST00000504663 CD101Q93033 1021 aa11□□□□□ -0.65
TPM3-217ENST00000504663 MCRS1Q96EZ8 462 aa11□□□□□ -0.65
TPM3-217ENST00000504663 BTBD6Q96KE9 485 aa11□□□□□ -0.65
TPM3-217ENST00000504663 NOX5Q96PH1 765 aa11□□□□□ -0.65
TPM3-217ENST00000504663 ACBD6Q9BR61 282 aa11□□□□□ -0.65
TPM3-217ENST00000504663 NUP85Q9BW27 656 aa11□□□□□ -0.65
TPM3-217ENST00000504663 ADAM22Q9P0K1 906 aa11□□□□□ -0.65
TPM3-217ENST00000504663 CDH9Q9ULB4 789 aa11□□□□□ -0.65
TPM3-217ENST00000504663 MRPL42Q9Y6G3 142 aaKnown RBP11□□□□□ -0.65
TPM3-217ENST00000504663 NT5C1B-RDH14C9J2C7 533 aa10.99□□□□□ -0.65
TPM3-217ENST00000504663 HHLA1C9JL84 531 aa10.99□□□□□ -0.65
TPM3-217ENST00000504663 E5RJQ4 531 aa10.99□□□□□ -0.65
TPM3-217ENST00000504663 CLDN5O00501 218 aa10.99□□□□□ -0.65
TPM3-217ENST00000504663 ENC1O14682 589 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms