RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 SLC12A9Q9BXP2 914 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 NOD2Q9HC29 1040 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 RBM28Q9NW13 759 aaKnown RBP5.62□□□□□ -1.51
NIPBL-204ENST00000504430 PCDHGA5Q9Y5G8 931 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 PCDHGA1Q9Y5H4 931 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 PRAMEF25A6NGN4 478 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 STX16-NPEPL1H3BU86 382 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 STX16O14662 325 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 PTBP3O95758 552 aaKnown RBP5.62□□□□□ -1.51
NIPBL-204ENST00000504430 AKT1P31749 480 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 TMEM154Q6P9G4 183 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 RALYLQ86SE5 291 aaKnown RBP5.62□□□□□ -1.51
NIPBL-204ENST00000504430 SPATA2LQ8IUW3 424 aaPredicted RBP5.62□□□□□ -1.51
NIPBL-204ENST00000504430 RNF168Q8IYW5 571 aaPredicted RBP5.62□□□□□ -1.51
NIPBL-204ENST00000504430 GOLGA6L1Q8N7Z2 621 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 ZNF837Q96EG3 531 aaPredicted RBP5.62□□□□□ -1.51
NIPBL-204ENST00000504430 EDEM2Q9BV94 578 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 NACAP1Q9BZK3 213 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 MTMR12Q9C0I1 747 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 AATFQ9NY61 560 aaKnown RBP eCLIP5.62□□□□□ -1.51
NIPBL-204ENST00000504430 PCDHA5Q9Y5H7 936 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 SESN1Q9Y6P5 492 aa5.62□□□□□ -1.51
NIPBL-204ENST00000504430 GTPBP1O00178 669 aaKnown RBP5.61□□□□□ -1.51
NIPBL-204ENST00000504430 SCAMP1O15126 338 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 CLASP2O75122 1294 aaKnown RBP5.61□□□□□ -1.51
NIPBL-204ENST00000504430 MT-ND5P03915 603 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 TM4SF1P30408 202 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 CPA2P48052 419 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 PTSQ03393 145 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 CBX3Q13185 183 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 KCNAB2Q13303 367 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 CUL2Q13617 745 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 ALG11Q2TAA5 492 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 CCDC148Q8NFR7 591 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 NEK11Q8NG66 645 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 OR52K2Q8NGK3 314 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 TNPO1Q92973 898 aaKnown RBP5.61□□□□□ -1.51
NIPBL-204ENST00000504430 HDAC10Q969S8 669 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 FER1L6-AS2Q96M78 137 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 ATP6V0BQ99437 205 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 PRPF18Q99633 342 aaKnown RBP5.61□□□□□ -1.51
NIPBL-204ENST00000504430 AFF4Q9UHB7 1163 aaKnown RBP5.61□□□□□ -1.51
NIPBL-204ENST00000504430 SMIM30A4D0T7 59 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 GCNT3O95395 438 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 OLFM2O95897 454 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 CPA1P15085 419 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 YY1P25490 414 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 ARL4DP49703 201 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 HK3P52790 923 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 MRPS9P82933 396 aaKnown RBP5.61□□□□□ -1.51
NIPBL-204ENST00000504430 PPP1R7Q15435 360 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 RAP1GAP2Q684P5 730 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 FDX2Q6P4F2 183 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 CLEC17AQ6ZS10 378 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 GAREM2Q75VX8 874 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 PRPF39Q86UA1 669 aaKnown RBP5.61□□□□□ -1.51
NIPBL-204ENST00000504430 UNC5CLQ8IV45 518 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 PEX5LQ8IYB4 626 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 MPP5Q8N3R9 675 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 CCHCR1Q8TD31 782 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 CTNNBL1Q8WYA6 563 aaPredicted RBP5.61□□□□□ -1.51
NIPBL-204ENST00000504430 TUBGCP5Q96RT8 1024 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 REXO4Q9GZR2 422 aaKnown RBP5.61□□□□□ -1.51
NIPBL-204ENST00000504430 SOX17Q9H6I2 414 aaPredicted RBP5.61□□□□□ -1.51
NIPBL-204ENST00000504430 LDAHQ9H6V9 325 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 TOR4AQ9NXH8 423 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 SRRDQ9UH36 339 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 ATP8B3O60423 1300 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 NEURL1BA8MQ27 555 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.61□□□□□ -1.51
NIPBL-204ENST00000504430 DNPH1O43598 174 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 VEGFDO43915 354 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 PRR35P0CG20 571 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 IL1R1P14778 569 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 BUD31P41223 144 aaPredicted RBP5.61□□□□□ -1.51
NIPBL-204ENST00000504430 HTD2P86397 168 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 ADCY2Q08462 1091 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 IRF3Q14653 427 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 ADCK5Q3MIX3 580 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 FAM69AQ5T7M9 428 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 ZNF468Q5VIY5 522 aaPredicted RBP5.61□□□□□ -1.51
NIPBL-204ENST00000504430 SYNE3Q6ZMZ3 975 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 INTS8Q75QN2 995 aaKnown RBP5.61□□□□□ -1.51
NIPBL-204ENST00000504430 RNF44Q7L0R7 432 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 TRIM46Q7Z4K8 759 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 FAM83AQ86UY5 434 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 TUSC5Q8IXB3 177 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 USP38Q8NB14 1042 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 KIAA1524Q8TCG1 905 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 ZFAND2BQ8WV99 257 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 GDF15Q99988 308 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 THUMPD3Q9BV44 507 aaKnown RBP5.61□□□□□ -1.51
NIPBL-204ENST00000504430 COPS7BQ9H9Q2 264 aaPredicted RBP5.61□□□□□ -1.51
NIPBL-204ENST00000504430 PRSS50Q9UI38 385 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 MAGEL2Q9UJ55 1249 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 DAPP1Q9UN19 280 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 POMT1Q9Y6A1 747 aa5.61□□□□□ -1.51
NIPBL-204ENST00000504430 CTAGE9A4FU28 777 aa5.6□□□□□ -1.51
NIPBL-204ENST00000504430 CBX7O95931 251 aa5.6□□□□□ -1.51
NIPBL-204ENST00000504430 PEPDP12955 493 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms