RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 BARX2Q9UMQ3 279 aaPredicted RBP10.71□□□□□ -0.69
NUP54-203ENST00000504173 BACE2Q9Y5Z0 518 aa10.71□□□□□ -0.69
NUP54-203ENST00000504173 CDY1Q9Y6F8 540 aa10.71□□□□□ -0.69
NUP54-203ENST00000504173 A0A1B0GTH6 734 aa10.7□□□□□ -0.7
NUP54-203ENST00000504173 OR6C75A6NL08 312 aa10.7□□□□□ -0.7
NUP54-203ENST00000504173 TEX28O15482 410 aa10.7□□□□□ -0.7
NUP54-203ENST00000504173 ADH1AP07327 375 aa10.7□□□□□ -0.7
NUP54-203ENST00000504173 FAM163BP0C2L3 166 aa10.7□□□□□ -0.7
NUP54-203ENST00000504173 CD58P19256 250 aa10.7□□□□□ -0.7
NUP54-203ENST00000504173 PCSK1P29120 753 aa10.7□□□□□ -0.7
NUP54-203ENST00000504173 GNL1P36915 607 aaPredicted RBP10.7□□□□□ -0.7
NUP54-203ENST00000504173 ARPP19P56211 112 aa10.7□□□□□ -0.7
NUP54-203ENST00000504173 UBASH3AP57075 661 aa10.7□□□□□ -0.7
NUP54-203ENST00000504173 YWHAEP62258 255 aaKnown RBP10.7□□□□□ -0.7
NUP54-203ENST00000504173 PLCB2Q00722 1185 aa10.7□□□□□ -0.7
NUP54-203ENST00000504173 TSPY1Q01534 308 aa10.7□□□□□ -0.7
NUP54-203ENST00000504173 DMWDQ09019 674 aa10.7□□□□□ -0.7
NUP54-203ENST00000504173 KCNMA1Q12791 1236 aa10.7□□□□□ -0.7
NUP54-203ENST00000504173 SYCP1Q15431 976 aa10.7□□□□□ -0.7
NUP54-203ENST00000504173 RRAGAQ7L523 313 aa10.7□□□□□ -0.7
NUP54-203ENST00000504173 ADGRD2Q7Z7M1 963 aa10.7□□□□□ -0.7
NUP54-203ENST00000504173 ARHGEF19Q8IW93 802 aa10.7□□□□□ -0.7
NUP54-203ENST00000504173 DCLK2Q8N568 766 aa10.7□□□□□ -0.7
NUP54-203ENST00000504173 TTC39CQ8N584 583 aa10.7□□□□□ -0.7
NUP54-203ENST00000504173 GPR161Q8N6U8 529 aaKnown RBP10.7□□□□□ -0.7
NUP54-203ENST00000504173 KBTBD7Q8WVZ9 684 aa10.7□□□□□ -0.7
NUP54-203ENST00000504173 NAP1L5Q96NT1 182 aaPredicted RBP10.7□□□□□ -0.7
NUP54-203ENST00000504173 KLHL5Q96PQ7 755 aa10.7□□□□□ -0.7
NUP54-203ENST00000504173 ARID3AQ99856 593 aa10.7□□□□□ -0.7
NUP54-203ENST00000504173 OXCT2Q9BYC2 517 aaPredicted RBP10.7□□□□□ -0.7
NUP54-203ENST00000504173 TLE6Q9H808 572 aa10.7□□□□□ -0.7
NUP54-203ENST00000504173 UBE2TQ9NPD8 197 aaPredicted RBP10.7□□□□□ -0.7
NUP54-203ENST00000504173 IGSF5Q9NSI5 407 aa10.7□□□□□ -0.7
NUP54-203ENST00000504173 APEX2Q9UBZ4 518 aa10.7□□□□□ -0.7
NUP54-203ENST00000504173 FRYQ5TBA9 3013 aa10.69□□□□□ -0.7
NUP54-203ENST00000504173 A8MXQ7 604 aa10.69□□□□□ -0.7
NUP54-203ENST00000504173 PRR5-ARHGAP8B1AHC4 643 aa10.69□□□□□ -0.7
NUP54-203ENST00000504173 GABRDO14764 452 aa10.69□□□□□ -0.7
NUP54-203ENST00000504173 PER2O15055 1255 aa10.69□□□□□ -0.7
NUP54-203ENST00000504173 ADAM12O43184 909 aa10.69□□□□□ -0.7
NUP54-203ENST00000504173 TEX33O43247 280 aa10.69□□□□□ -0.7
NUP54-203ENST00000504173 CBFA2T2O43439 604 aa10.69□□□□□ -0.7
NUP54-203ENST00000504173 HCRTO43612 131 aa10.69□□□□□ -0.7
NUP54-203ENST00000504173 TBC1D4O60343 1298 aa10.69□□□□□ -0.7
NUP54-203ENST00000504173 TPM3P06753 285 aa10.69□□□□□ -0.7
NUP54-203ENST00000504173 PDGFRBP09619 1106 aa10.69□□□□□ -0.7
NUP54-203ENST00000504173 OR4Q2P0C623 313 aa10.69□□□□□ -0.7
NUP54-203ENST00000504173 CPB1P15086 417 aa10.69□□□□□ -0.7
NUP54-203ENST00000504173 ACAT1P24752 427 aaKnown RBP10.69□□□□□ -0.7
NUP54-203ENST00000504173 KLRC2P26717 231 aa10.69□□□□□ -0.7
NUP54-203ENST00000504173 OR1D2P34982 312 aa10.69□□□□□ -0.7
NUP54-203ENST00000504173 NRIP1P48552 1158 aa10.69□□□□□ -0.7
NUP54-203ENST00000504173 ARHGAP8P85298 464 aa10.69□□□□□ -0.7
NUP54-203ENST00000504173 APBA1Q02410 837 aa10.69□□□□□ -0.7
NUP54-203ENST00000504173 GCNT1Q02742 428 aa10.69□□□□□ -0.7
NUP54-203ENST00000504173 NR1I3Q14994 352 aa10.69□□□□□ -0.7
NUP54-203ENST00000504173 PHLDB3Q6NSJ2 640 aa10.69□□□□□ -0.7
NUP54-203ENST00000504173 GJB7Q6PEY0 223 aa10.69□□□□□ -0.7
NUP54-203ENST00000504173 ZC3H14Q6PJT7 736 aaKnown RBP10.69□□□□□ -0.7
NUP54-203ENST00000504173 RSPO2Q6UXX9 243 aaPredicted RBP10.69□□□□□ -0.7
NUP54-203ENST00000504173 RBM23Q86U06 439 aaKnown RBP10.69□□□□□ -0.7
NUP54-203ENST00000504173 PPFIBP1Q86W92 1011 aa10.69□□□□□ -0.7
NUP54-203ENST00000504173 OR10T2Q8NGX3 314 aa10.69□□□□□ -0.7
NUP54-203ENST00000504173 KAT5Q92993 513 aa10.69□□□□□ -0.7
NUP54-203ENST00000504173 FAM81BQ96LP2 452 aa10.69□□□□□ -0.7
NUP54-203ENST00000504173 ERGIC2Q96RQ1 377 aa10.69□□□□□ -0.7
NUP54-203ENST00000504173 CDCA3Q99618 268 aaPredicted RBP10.69□□□□□ -0.7
NUP54-203ENST00000504173 RTP3Q9BQQ7 232 aa10.69□□□□□ -0.7
NUP54-203ENST00000504173 CLSTN3Q9BQT9 956 aa10.69□□□□□ -0.7
NUP54-203ENST00000504173 ACBD6Q9BR61 282 aa10.69□□□□□ -0.7
NUP54-203ENST00000504173 SIX2Q9NPC8 291 aa10.69□□□□□ -0.7
NUP54-203ENST00000504173 CISHQ9NSE2 258 aa10.69□□□□□ -0.7
NUP54-203ENST00000504173 IFNKQ9P0W0 207 aa10.69□□□□□ -0.7
NUP54-203ENST00000504173 CDH9Q9ULB4 789 aa10.69□□□□□ -0.7
NUP54-203ENST00000504173 FSD2A1L4K1 749 aa10.68□□□□□ -0.7
NUP54-203ENST00000504173 CLASP2O75122 1294 aaKnown RBP10.68□□□□□ -0.7
NUP54-203ENST00000504173 GLUD1P00367 558 aa10.68□□□□□ -0.7
NUP54-203ENST00000504173 TRIM21P19474 475 aaKnown RBP10.68□□□□□ -0.7
NUP54-203ENST00000504173 LMO2P25791 158 aa10.68□□□□□ -0.7
NUP54-203ENST00000504173 KLK7P49862 253 aa10.68□□□□□ -0.7
NUP54-203ENST00000504173 NDST1P52848 882 aa10.68□□□□□ -0.7
NUP54-203ENST00000504173 MFAP3P55082 362 aa10.68□□□□□ -0.7
NUP54-203ENST00000504173 PSMC1P62191 440 aaKnown RBP10.68□□□□□ -0.7
NUP54-203ENST00000504173 ROR1Q01973 937 aa10.68□□□□□ -0.7
NUP54-203ENST00000504173 INCA1Q0VD86 236 aa10.68□□□□□ -0.7
NUP54-203ENST00000504173 ORC1Q13415 861 aa10.68□□□□□ -0.7
NUP54-203ENST00000504173 RAB33AQ14088 237 aa10.68□□□□□ -0.7
NUP54-203ENST00000504173 DUSP6Q16828 381 aa10.68□□□□□ -0.7
NUP54-203ENST00000504173 ARHGAP44Q17R89 818 aa10.68□□□□□ -0.7
NUP54-203ENST00000504173 INTS6LQ5JSJ4 861 aaKnown RBP10.68□□□□□ -0.7
NUP54-203ENST00000504173 KLHDC7AQ5VTJ3 777 aa10.68□□□□□ -0.7
NUP54-203ENST00000504173 IQCEQ6IPM2 695 aa10.68□□□□□ -0.7
NUP54-203ENST00000504173 SLC8B1Q6J4K2 584 aa10.68□□□□□ -0.7
NUP54-203ENST00000504173 ENOSF1Q7L5Y1 443 aa10.68□□□□□ -0.7
NUP54-203ENST00000504173 UNC93AQ86WB7 457 aa10.68□□□□□ -0.7
NUP54-203ENST00000504173 PALB2Q86YC2 1186 aa10.68□□□□□ -0.7
NUP54-203ENST00000504173 DCP1BQ8IZD4 617 aaKnown RBP10.68□□□□□ -0.7
NUP54-203ENST00000504173 NEK11Q8NG66 645 aa10.68□□□□□ -0.7
NUP54-203ENST00000504173 KREMEN1Q96MU8 473 aa10.68□□□□□ -0.7
NUP54-203ENST00000504173 TMEM209Q96SK2 561 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms