RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 CACNA2D1P54289 1103 aa7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 GSCP56915 257 aaPredicted RBP7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 OGDHQ02218 1023 aa7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 MAMLD1Q13495 774 aa7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 DCAF12L1Q5VU92 463 aa7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 MFSD5Q6N075 450 aa7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 TRNP1Q6NT89 227 aa7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 C11orf63Q6NUN7 778 aa7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 PMF1Q6P1K2 205 aa7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 DCLRE1AQ6PJP8 1040 aa7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 FAM43BQ6ZT52 329 aaPredicted RBP7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 C16orf59Q7L2K0 433 aa7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 RHOT2Q8IXI1 618 aa7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 TMEM86AQ8N2M4 240 aa7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 B3GALNT2Q8NCR0 500 aa7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 OR10T2Q8NGX3 314 aa7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 ZNF564Q8TBZ8 553 aaPredicted RBP7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 URGCPQ8TCY9 931 aa7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 COG1Q8WTW3 980 aa7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 SLC35F5Q8WV83 523 aa7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 GBF1Q92538 1859 aa7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 CD101Q93033 1021 aa7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 MARVELD3Q96A59 401 aa7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 PIWIL1Q96J94 861 aaKnown RBP7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 VCPIP1Q96JH7 1222 aa7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 ALS2CR12Q96Q35 445 aa7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 TMEM209Q96SK2 561 aa7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 TMEM106CQ9BVX2 250 aa7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 SLC4A5Q9BY07 1137 aa7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 ZNF518BQ9C0D4 1074 aa7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 PDCL3Q9H2J4 239 aa7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 SNX25Q9H3E2 840 aa7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 PLXNA4Q9HCM2 1894 aa7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 TMLHEQ9NVH6 421 aa7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 DDX43Q9NXZ2 648 aaKnown RBP7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 ADAM22Q9P0K1 906 aa7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 CTTNBP2NLQ9P2B4 639 aa7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 KIAA1257Q9ULG3 409 aa7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 SNX12Q9UMY4 172 aa7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 PRG3Q9Y2Y8 225 aaPredicted RBP7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 JRKLQ9Y4A0 524 aa7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 PCDHB7Q9Y5E2 793 aa7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.31□□□□□ -1.24
TOPBP1-203ENST00000503464 ZNF638Q14966 1978 aaKnown RBP7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 MYBPHLA2RUH7 354 aa7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 TBKBP1A7MCY6 615 aa7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 CLDN5O00501 218 aa7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 NRP1O14786 923 aa7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 DGKIO75912 1065 aa7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 BEST1O76090 585 aa7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 ACRP10323 421 aa7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 ODC1P11926 461 aa7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 TYMPP19971 482 aa7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 ADORA2BP29275 332 aa7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 GABRB2P47870 512 aa7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 OR1G1P47890 313 aa7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 RPL34P49207 117 aaKnown RBP7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 RABGGTBP53611 331 aa7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 EPHB4P54760 987 aa7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 NAP1L1P55209 391 aaKnown RBP7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 BCAR1P56945 870 aa7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 WDR5P61964 334 aaKnown RBP7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 RPL7AP62424 266 aaKnown RBP7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 PDE4CQ08493 712 aa7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 MDH1BQ5I0G3 518 aa7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 DAB2IPQ5VWQ8 1189 aa7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 DSTYKQ6XUX3 929 aa7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 LRRTM3Q86VH5 581 aa7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 XYLT1Q86Y38 959 aa7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 CREG2Q8IUH2 290 aa7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 ZMIZ2Q8NF64 920 aa7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 MYRIPQ8NFW9 859 aa7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 JOSD2Q8TAC2 188 aa7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 SLC2A14Q8TDB8 520 aa7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 ALG3Q92685 438 aa7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 KRT35Q92764 455 aa7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 ZNF689Q96CS4 500 aaPredicted RBP7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 TRIM11Q96F44 468 aa7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 HES6Q96HZ4 224 aa7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 B3GALT6Q96L58 329 aa7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 OSBPL9Q96SU4 736 aa7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 PSMB7Q99436 277 aa7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 HNRNPABQ99729 332 aaKnown RBP7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 SYT15Q9BQS2 421 aa7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 VN1R3Q9BXE9 311 aa7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 B3GNT5Q9BYG0 378 aa7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 RHOBTB2Q9BYZ6 727 aa7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 CWH43Q9H720 699 aa7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 SMARCAL1Q9NZC9 954 aa7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 EHD2Q9NZN4 543 aa7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 KANSL3Q9P2N6 904 aa7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 UVRAGQ9P2Y5 699 aa7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 CDC23Q9UJX2 597 aa7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 ANAPC7Q9UJX3 599 aa7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 PCDHB8Q9UN66 801 aa7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 ALG6Q9Y672 507 aa7.3□□□□□ -1.24
TOPBP1-203ENST00000503464 ATG2AQ2TAZ0 1938 aa7.29□□□□□ -1.24
TOPBP1-203ENST00000503464 ABHD14A-ACY1A0A1B0GW23 586 aa7.29□□□□□ -1.24
TOPBP1-203ENST00000503464 TMEM191CA6NGB0 347 aa7.29□□□□□ -1.24
TOPBP1-203ENST00000503464 TMEM110-MUSTN1A8MSY1 372 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms