RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 CSGALNACT1Q8TDX6 532 aa17.42■□□□□ 0.38
SCLT1-204ENST00000503215 USP13Q92995 863 aaPredicted RBP17.42■□□□□ 0.38
SCLT1-204ENST00000503215 ELMO3Q96BJ8 720 aa17.42■□□□□ 0.38
SCLT1-204ENST00000503215 CGRRF1Q99675 332 aa17.42■□□□□ 0.38
SCLT1-204ENST00000503215 MRPL45Q9BRJ2 306 aaKnown RBP17.42■□□□□ 0.38
SCLT1-204ENST00000503215 CHRDQ9H2X0 955 aa17.42■□□□□ 0.38
SCLT1-204ENST00000503215 FBXO4Q9UKT5 387 aa17.42■□□□□ 0.38
SCLT1-204ENST00000503215 UBE4BO95155 1302 aa17.42■□□□□ 0.38
SCLT1-204ENST00000503215 FANCMQ8IYD8 2048 aa17.42■□□□□ 0.38
SCLT1-204ENST00000503215 PFKFB1P16118 471 aa17.41■□□□□ 0.38
SCLT1-204ENST00000503215 TNNI1P19237 187 aa17.41■□□□□ 0.38
SCLT1-204ENST00000503215 WEE1P30291 646 aa17.41■□□□□ 0.38
SCLT1-204ENST00000503215 HOXC13P31276 330 aa17.41■□□□□ 0.38
SCLT1-204ENST00000503215 KNOP1Q1ED39 458 aaKnown RBP17.41■□□□□ 0.38
SCLT1-204ENST00000503215 SPATA2LQ8IUW3 424 aaPredicted RBP17.41■□□□□ 0.38
SCLT1-204ENST00000503215 SCN4BQ8IWT1 228 aa17.41■□□□□ 0.38
SCLT1-204ENST00000503215 CEP57L1Q8IYX8 460 aa17.41■□□□□ 0.38
SCLT1-204ENST00000503215 DCLK2Q8N568 766 aa17.41■□□□□ 0.38
SCLT1-204ENST00000503215 SUMF1Q8NBK3 374 aa17.41■□□□□ 0.38
SCLT1-204ENST00000503215 KIAA0895Q8NCT3 520 aa17.41■□□□□ 0.38
SCLT1-204ENST00000503215 BPIFB1Q8TDL5 484 aa17.41■□□□□ 0.38
SCLT1-204ENST00000503215 GCNAQ96QF7 691 aa17.41■□□□□ 0.38
SCLT1-204ENST00000503215 SLC22A12Q96S37 553 aa17.41■□□□□ 0.38
SCLT1-204ENST00000503215 SYT15Q9BQS2 421 aa17.41■□□□□ 0.38
SCLT1-204ENST00000503215 ABCB6Q9NP58 842 aa17.41■□□□□ 0.38
SCLT1-204ENST00000503215 OBP2AQ9NY56 170 aa17.41■□□□□ 0.38
SCLT1-204ENST00000503215 PATJQ8NI35 1801 aa17.41■□□□□ 0.38
SCLT1-204ENST00000503215 OTOL1A6NHN0 477 aaPredicted RBP17.4■□□□□ 0.38
SCLT1-204ENST00000503215 SPECC1L-ADORA2AF8WAN1 911 aa17.4■□□□□ 0.38
SCLT1-204ENST00000503215 NOL4O94818 638 aa17.4■□□□□ 0.38
SCLT1-204ENST00000503215 CSH1P0DML2 217 aa17.4■□□□□ 0.38
SCLT1-204ENST00000503215 CSH2P0DML3 217 aa17.4■□□□□ 0.38
SCLT1-204ENST00000503215 WARSP23381 471 aaKnown RBP17.4■□□□□ 0.38
SCLT1-204ENST00000503215 PCSK1P29120 753 aa17.4■□□□□ 0.38
SCLT1-204ENST00000503215 CTHP32929 405 aa17.4■□□□□ 0.38
SCLT1-204ENST00000503215 MAGEA9P43362 315 aa17.4■□□□□ 0.38
SCLT1-204ENST00000503215 MYL6P60660 151 aa17.4■□□□□ 0.38
SCLT1-204ENST00000503215 ZNF528Q3MIS6 628 aa17.4■□□□□ 0.38
SCLT1-204ENST00000503215 KMT5BQ4FZB7 885 aa17.4■□□□□ 0.38
SCLT1-204ENST00000503215 ARHGAP29Q52LW3 1261 aa17.4■□□□□ 0.38
SCLT1-204ENST00000503215 DPH6Q7L8W6 267 aa17.4■□□□□ 0.38
SCLT1-204ENST00000503215 HS2ST1Q7LGA3 356 aa17.4■□□□□ 0.38
SCLT1-204ENST00000503215 SPATA18Q8TC71 538 aa17.4■□□□□ 0.38
SCLT1-204ENST00000503215 NELL1Q92832 810 aa17.4■□□□□ 0.38
SCLT1-204ENST00000503215 MYLPFQ96A32 169 aa17.4■□□□□ 0.38
SCLT1-204ENST00000503215 FNBP1Q96RU3 617 aa17.4■□□□□ 0.38
SCLT1-204ENST00000503215 CYP2S1Q96SQ9 504 aa17.4■□□□□ 0.38
SCLT1-204ENST00000503215 MMS19Q96T76 1030 aa17.4■□□□□ 0.38
SCLT1-204ENST00000503215 SEMA4AQ9H3S1 761 aa17.4■□□□□ 0.38
SCLT1-204ENST00000503215 PRMT8Q9NR22 394 aaPredicted RBP17.4■□□□□ 0.38
SCLT1-204ENST00000503215 GKN1Q9NS71 199 aa17.4■□□□□ 0.38
SCLT1-204ENST00000503215 C2orf42Q9NWW7 574 aa17.4■□□□□ 0.38
SCLT1-204ENST00000503215 R3HCC1Q9Y3T6 440 aaKnown RBP17.4■□□□□ 0.38
SCLT1-204ENST00000503215 FRYLO94915 3013 aa17.4■□□□□ 0.38
SCLT1-204ENST00000503215 TDGF1P13385 188 aa17.4■□□□□ 0.38
SCLT1-204ENST00000503215 BDNFP23560 247 aa17.4■□□□□ 0.38
SCLT1-204ENST00000503215 CMA1P23946 247 aa17.4■□□□□ 0.38
SCLT1-204ENST00000503215 RPL10AP62906 217 aaKnown RBP17.4■□□□□ 0.38
SCLT1-204ENST00000503215 CFAP221Q4G0U5 840 aa17.4■□□□□ 0.38
SCLT1-204ENST00000503215 TRIM68Q6AZZ1 485 aa17.4■□□□□ 0.38
SCLT1-204ENST00000503215 Q6ZS52 159 aa17.4■□□□□ 0.38
SCLT1-204ENST00000503215 MON1AQ86VX9 555 aa17.4■□□□□ 0.38
SCLT1-204ENST00000503215 C12orf56Q8IXR9 622 aa17.4■□□□□ 0.38
SCLT1-204ENST00000503215 CELF5Q8N6W0 485 aaKnown RBP17.4■□□□□ 0.38
SCLT1-204ENST00000503215 XYLT2Q9H1B5 865 aa17.4■□□□□ 0.38
SCLT1-204ENST00000503215 DPEP3Q9H4B8 488 aa17.4■□□□□ 0.38
SCLT1-204ENST00000503215 HPS4Q9NQG7 708 aa17.4■□□□□ 0.38
SCLT1-204ENST00000503215 CDH9Q9ULB4 789 aa17.4■□□□□ 0.38
SCLT1-204ENST00000503215 HPSEQ9Y251 543 aa17.4■□□□□ 0.38
SCLT1-204ENST00000503215 ZNF292O60281 2723 aa17.39■□□□□ 0.37
SCLT1-204ENST00000503215 NUP210Q8TEM1 1887 aaPredicted RBP17.39■□□□□ 0.37
SCLT1-204ENST00000503215 EXOC3O60645 756 aa17.39■□□□□ 0.37
SCLT1-204ENST00000503215 PRR29P0C7W0 189 aa17.39■□□□□ 0.37
SCLT1-204ENST00000503215 GNL1P36915 607 aaPredicted RBP17.39■□□□□ 0.37
SCLT1-204ENST00000503215 MLLT6P55198 1093 aaPredicted RBP17.39■□□□□ 0.37
SCLT1-204ENST00000503215 SNRPFP62306 86 aaKnown RBP17.39■□□□□ 0.37
SCLT1-204ENST00000503215 SATB1Q01826 763 aa17.39■□□□□ 0.37
SCLT1-204ENST00000503215 PON2Q15165 354 aa17.39■□□□□ 0.37
SCLT1-204ENST00000503215 WDR72Q3MJ13 1102 aa17.39■□□□□ 0.37
SCLT1-204ENST00000503215 ZC3H14Q6PJT7 736 aaKnown RBP17.39■□□□□ 0.37
SCLT1-204ENST00000503215 ZBTB44Q8NCP5 570 aa17.39■□□□□ 0.37
SCLT1-204ENST00000503215 CHFRQ96EP1 664 aa17.39■□□□□ 0.37
SCLT1-204ENST00000503215 PCED1BQ96HM7 432 aa17.39■□□□□ 0.37
SCLT1-204ENST00000503215 SPATA32Q96LK8 384 aa17.39■□□□□ 0.37
SCLT1-204ENST00000503215 MYRFLQ96LU7 910 aa17.39■□□□□ 0.37
SCLT1-204ENST00000503215 FAM83CQ9BQN1 747 aa17.39■□□□□ 0.37
SCLT1-204ENST00000503215 C8orf33Q9H7E9 229 aaPredicted RBP17.39■□□□□ 0.37
SCLT1-204ENST00000503215 TMEM30AQ9NV96 361 aa17.39■□□□□ 0.37
SCLT1-204ENST00000503215 DMAC2Q9NW81 257 aa17.39■□□□□ 0.37
SCLT1-204ENST00000503215 ZSCAN32Q9NX65 697 aa17.39■□□□□ 0.37
SCLT1-204ENST00000503215 MAGEC2Q9UBF1 373 aaPredicted RBP17.39■□□□□ 0.37
SCLT1-204ENST00000503215 DENND4CQ5VZ89 1909 aa17.38■□□□□ 0.37
SCLT1-204ENST00000503215 ARSAP15289 507 aa17.38■□□□□ 0.37
SCLT1-204ENST00000503215 AVPR1AP37288 418 aa17.38■□□□□ 0.37
SCLT1-204ENST00000503215 MAGEA11P43364 429 aa17.38■□□□□ 0.37
SCLT1-204ENST00000503215 NDUFA8P51970 172 aa17.38■□□□□ 0.37
SCLT1-204ENST00000503215 CACNA2D1P54289 1103 aa17.38■□□□□ 0.37
SCLT1-204ENST00000503215 USP46P62068 366 aa17.38■□□□□ 0.37
SCLT1-204ENST00000503215 CYP27A1Q02318 531 aa17.38■□□□□ 0.37
SCLT1-204ENST00000503215 DMWDQ09019 674 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms