RNA–Protein interactions for RNA: ENST00000502690.5

UBE2D3-213, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-213ENST00000502690 PLCB2Q00722 1185 aa18.28■□□□□ 0.52
UBE2D3-213ENST00000502690 ALCAMQ13740 583 aa18.28■□□□□ 0.52
UBE2D3-213ENST00000502690 NFE2Q16621 373 aaPredicted RBP18.28■□□□□ 0.52
UBE2D3-213ENST00000502690 DGKKQ5KSL6 1271 aa18.28■□□□□ 0.52
UBE2D3-213ENST00000502690 C1orf228Q6PIY5 440 aa18.28■□□□□ 0.52
UBE2D3-213ENST00000502690 LIMS2Q7Z4I7 341 aa18.28■□□□□ 0.52
UBE2D3-213ENST00000502690 TRIM9Q9C026 710 aa18.28■□□□□ 0.52
UBE2D3-213ENST00000502690 FBRSL1Q9HCM7 1045 aaKnown RBP18.28■□□□□ 0.52
UBE2D3-213ENST00000502690 INTS13Q9NVM9 706 aa18.28■□□□□ 0.52
UBE2D3-213ENST00000502690 KBTBD4Q9NVX7 518 aa18.28■□□□□ 0.52
UBE2D3-213ENST00000502690 GMEB2Q9UKD1 530 aa18.28■□□□□ 0.52
UBE2D3-213ENST00000502690 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.28■□□□□ 0.52
UBE2D3-213ENST00000502690 MYOFQ9NZM1 2061 aa18.27■□□□□ 0.52
UBE2D3-213ENST00000502690 TMEM191BP0C7N4 346 aa18.27■□□□□ 0.52
UBE2D3-213ENST00000502690 CSH1P0DML2 217 aa18.27■□□□□ 0.52
UBE2D3-213ENST00000502690 CSH2P0DML3 217 aa18.27■□□□□ 0.52
UBE2D3-213ENST00000502690 PXNP49023 591 aaPredicted RBP18.27■□□□□ 0.52
UBE2D3-213ENST00000502690 ATXN1P54253 815 aaKnown RBP18.27■□□□□ 0.52
UBE2D3-213ENST00000502690 RBP5P82980 135 aa18.27■□□□□ 0.52
UBE2D3-213ENST00000502690 MYL7Q01449 175 aa18.27■□□□□ 0.52
UBE2D3-213ENST00000502690 RUNX3Q13761 415 aa18.27■□□□□ 0.52
UBE2D3-213ENST00000502690 PPP2R5DQ14738 602 aa18.27■□□□□ 0.52
UBE2D3-213ENST00000502690 STK38Q15208 465 aa18.27■□□□□ 0.52
UBE2D3-213ENST00000502690 FOXD4L5Q5VV16 416 aaPredicted RBP18.27■□□□□ 0.52
UBE2D3-213ENST00000502690 LAIR1Q6GTX8 287 aa18.27■□□□□ 0.52
UBE2D3-213ENST00000502690 SHC4Q6S5L8 630 aa18.27■□□□□ 0.52
UBE2D3-213ENST00000502690 EPM2AIP1Q7L775 607 aaPredicted RBP18.27■□□□□ 0.52
UBE2D3-213ENST00000502690 MON1AQ86VX9 555 aa18.27■□□□□ 0.52
UBE2D3-213ENST00000502690 CCDC65Q8IXS2 484 aa18.27■□□□□ 0.52
UBE2D3-213ENST00000502690 TMEM86AQ8N2M4 240 aa18.27■□□□□ 0.52
UBE2D3-213ENST00000502690 TOP6BLQ8N6T0 577 aa18.27■□□□□ 0.52
UBE2D3-213ENST00000502690 CACTINQ8WUQ7 758 aaKnown RBP18.27■□□□□ 0.52
UBE2D3-213ENST00000502690 FOXD4L4Q8WXT5 416 aaPredicted RBP18.27■□□□□ 0.52
UBE2D3-213ENST00000502690 CYP2S1Q96SQ9 504 aa18.27■□□□□ 0.52
UBE2D3-213ENST00000502690 TNMDQ9H2S6 317 aa18.27■□□□□ 0.52
UBE2D3-213ENST00000502690 TMEM206Q9H813 350 aa18.27■□□□□ 0.52
UBE2D3-213ENST00000502690 ABCB6Q9NP58 842 aa18.27■□□□□ 0.52
UBE2D3-213ENST00000502690 CRTAC1Q9NQ79 661 aa18.27■□□□□ 0.52
UBE2D3-213ENST00000502690 TDP1Q9NUW8 608 aa18.27■□□□□ 0.52
UBE2D3-213ENST00000502690 HSPBP1Q9NZL4 362 aa18.27■□□□□ 0.52
UBE2D3-213ENST00000502690 C2orf78A6NCI8 922 aa18.26■□□□□ 0.51
UBE2D3-213ENST00000502690 K7ELQ4 463 aaPredicted RBP18.26■□□□□ 0.51
UBE2D3-213ENST00000502690 SPTLC2O15270 562 aa18.26■□□□□ 0.51
UBE2D3-213ENST00000502690 TGFB1I1O43294 461 aa18.26■□□□□ 0.51
UBE2D3-213ENST00000502690 SIM2Q14190 667 aaPredicted RBP18.26■□□□□ 0.51
UBE2D3-213ENST00000502690 TMEM196Q5HYL7 178 aa18.26■□□□□ 0.51
UBE2D3-213ENST00000502690 FAM171BQ6P995 826 aa18.26■□□□□ 0.51
UBE2D3-213ENST00000502690 LONP2Q86WA8 852 aa18.26■□□□□ 0.51
UBE2D3-213ENST00000502690 EZH1Q92800 747 aaPredicted RBP18.26■□□□□ 0.51
UBE2D3-213ENST00000502690 SECISBP2LQ93073 1101 aaKnown RBP18.26■□□□□ 0.51
UBE2D3-213ENST00000502690 MYLPFQ96A32 169 aa18.26■□□□□ 0.51
UBE2D3-213ENST00000502690 DHX58Q96C10 678 aa18.26■□□□□ 0.51
UBE2D3-213ENST00000502690 TRMT2BQ96GJ1 504 aaKnown RBP18.26■□□□□ 0.51
UBE2D3-213ENST00000502690 MYRFLQ96LU7 910 aa18.26■□□□□ 0.51
UBE2D3-213ENST00000502690 BACH2Q9BYV9 841 aa18.26■□□□□ 0.51
UBE2D3-213ENST00000502690 GZF1Q9H116 711 aaPredicted RBP18.26■□□□□ 0.51
UBE2D3-213ENST00000502690 ZSCAN16Q9H4T2 348 aaPredicted RBP18.26■□□□□ 0.51
UBE2D3-213ENST00000502690 TRPC7Q9HCX4 862 aa18.26■□□□□ 0.51
UBE2D3-213ENST00000502690 EGFP01133 1207 aa18.25■□□□□ 0.51
UBE2D3-213ENST00000502690 DDX6P26196 483 aaKnown RBP eCLIP18.25■□□□□ 0.513e-8■□□□□ 10.6
UBE2D3-213ENST00000502690 USP46P62068 366 aa18.25■□□□□ 0.51
UBE2D3-213ENST00000502690 RPL10AP62906 217 aaKnown RBP18.25■□□□□ 0.51
UBE2D3-213ENST00000502690 LMNB2Q03252 620 aa18.25■□□□□ 0.51
UBE2D3-213ENST00000502690 ZNF77Q15935 545 aa18.25■□□□□ 0.51
UBE2D3-213ENST00000502690 CFAP221Q4G0U5 840 aa18.25■□□□□ 0.51
UBE2D3-213ENST00000502690 SPATA2LQ8IUW3 424 aaPredicted RBP18.25■□□□□ 0.51
UBE2D3-213ENST00000502690 SCN4BQ8IWT1 228 aa18.25■□□□□ 0.51
UBE2D3-213ENST00000502690 TTC16Q8NEE8 873 aa18.25■□□□□ 0.51
UBE2D3-213ENST00000502690 MRPS31Q92665 395 aaKnown RBP18.25■□□□□ 0.51
UBE2D3-213ENST00000502690 HPDLQ96IR7 371 aa18.25■□□□□ 0.51
UBE2D3-213ENST00000502690 SYT15Q9BQS2 421 aa18.25■□□□□ 0.51
UBE2D3-213ENST00000502690 THG1LQ9NWX6 298 aaKnown RBP18.25■□□□□ 0.51
UBE2D3-213ENST00000502690 DCDC2BA2VCK2 349 aa18.24■□□□□ 0.51
UBE2D3-213ENST00000502690 ANTXRLA6NF34 631 aa18.24■□□□□ 0.51
UBE2D3-213ENST00000502690 ASIC1P78348 528 aa18.24■□□□□ 0.51
UBE2D3-213ENST00000502690 ZXDBP98169 803 aa18.24■□□□□ 0.51
UBE2D3-213ENST00000502690 EHHADHQ08426 723 aa18.24■□□□□ 0.51
UBE2D3-213ENST00000502690 USP4Q13107 963 aa18.24■□□□□ 0.51
UBE2D3-213ENST00000502690 MTF1Q14872 753 aa18.24■□□□□ 0.51
UBE2D3-213ENST00000502690 FOXD4L6Q3SYB3 417 aaPredicted RBP18.24■□□□□ 0.51
UBE2D3-213ENST00000502690 FOXD4L3Q6VB84 417 aaPredicted RBP18.24■□□□□ 0.51
UBE2D3-213ENST00000502690 FAM160A2Q8N612 972 aaPredicted RBP18.24■□□□□ 0.51
UBE2D3-213ENST00000502690 GPR161Q8N6U8 529 aaKnown RBP18.24■□□□□ 0.51
UBE2D3-213ENST00000502690 ARL14EPQ8N8R7 260 aaPredicted RBP18.24■□□□□ 0.51
UBE2D3-213ENST00000502690 RDH13Q8NBN7 331 aa18.24■□□□□ 0.51
UBE2D3-213ENST00000502690 ANKRD36BP1Q96IX9 119 aa18.24■□□□□ 0.51
UBE2D3-213ENST00000502690 MRPL45Q9BRJ2 306 aaKnown RBP18.24■□□□□ 0.51
UBE2D3-213ENST00000502690 KIF9Q9HAQ2 790 aa18.24■□□□□ 0.51
UBE2D3-213ENST00000502690 AGPAT3Q9NRZ7 376 aa18.24■□□□□ 0.51
UBE2D3-213ENST00000502690 TMEM30AQ9NV96 361 aa18.24■□□□□ 0.51
UBE2D3-213ENST00000502690 GCNT4Q9P109 453 aa18.24■□□□□ 0.51
UBE2D3-213ENST00000502690 CDV3Q9UKY7 258 aaKnown RBP18.24■□□□□ 0.51
UBE2D3-213ENST00000502690 RAB23Q9ULC3 237 aa18.24■□□□□ 0.51
UBE2D3-213ENST00000502690 WNT6Q9Y6F9 365 aa18.24■□□□□ 0.51
UBE2D3-213ENST00000502690 ZNF233A6NK53 670 aa18.23■□□□□ 0.51
UBE2D3-213ENST00000502690 TRDMT1O14717 391 aaKnown RBP18.23■□□□□ 0.51
UBE2D3-213ENST00000502690 CLIC2O15247 247 aa18.23■□□□□ 0.51
UBE2D3-213ENST00000502690 RNF40O75150 1001 aa18.23■□□□□ 0.51
UBE2D3-213ENST00000502690 PPP6R2O75170 966 aa18.23■□□□□ 0.51
UBE2D3-213ENST00000502690 RETP07949 1114 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms