RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	GOLGA6L9	A6NEM1	432 aa		12.89	□□□□□ -0.35
MATR3-231	ENST00000502394	NT5C1B-RDH14	C9J2C7	533 aa		12.89	□□□□□ -0.35
MATR3-231	ENST00000502394	TRAPPC3	O43617	180 aa		12.89	□□□□□ -0.35
MATR3-231	ENST00000502394	TBC1D4	O60343	1298 aa		12.89	□□□□□ -0.35
MATR3-231	ENST00000502394	ATP2C2	O75185	946 aa		12.89	□□□□□ -0.35
MATR3-231	ENST00000502394	TADA2A	O75478	443 aa		12.89	□□□□□ -0.35
MATR3-231	ENST00000502394	PDGFRB	P09619	1106 aa		12.89	□□□□□ -0.35
MATR3-231	ENST00000502394	H2AFZ	P0C0S5	128 aa		12.89	□□□□□ -0.35
MATR3-231	ENST00000502394	PTPN1	P18031	435 aa	Known RBP	12.89	□□□□□ -0.35
MATR3-231	ENST00000502394	LAG3	P18627	525 aa		12.89	□□□□□ -0.35
MATR3-231	ENST00000502394	MSN	P26038	577 aa	Known RBP	12.89	□□□□□ -0.35
MATR3-231	ENST00000502394	PCSK1	P29120	753 aa		12.89	□□□□□ -0.35
MATR3-231	ENST00000502394	GPD2	P43304	727 aa		12.89	□□□□□ -0.35
MATR3-231	ENST00000502394	MAGEA10	P43363	369 aa	Predicted RBP	12.89	□□□□□ -0.35
MATR3-231	ENST00000502394	GALC	P54803	685 aa		12.89	□□□□□ -0.35
MATR3-231	ENST00000502394	PTP4A2	Q12974	167 aa		12.89	□□□□□ -0.35
MATR3-231	ENST00000502394	CCDC142	Q17RM4	750 aa		12.89	□□□□□ -0.35
MATR3-231	ENST00000502394	INTS6L	Q5JSJ4	861 aa	Known RBP	12.89	□□□□□ -0.35
MATR3-231	ENST00000502394	OVOS1	Q6IE37	1185 aa		12.89	□□□□□ -0.35
MATR3-231	ENST00000502394	DENND1B	Q6P3S1	775 aa		12.89	□□□□□ -0.35
MATR3-231	ENST00000502394	FAM171B	Q6P995	826 aa		12.89	□□□□□ -0.35
MATR3-231	ENST00000502394	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	12.89	□□□□□ -0.35
MATR3-231	ENST00000502394	PAQR9	Q6ZVX9	377 aa		12.89	□□□□□ -0.35
MATR3-231	ENST00000502394	H2AFV	Q71UI9	128 aa		12.89	□□□□□ -0.35
MATR3-231	ENST00000502394	MON1B	Q7L1V2	547 aa		12.89	□□□□□ -0.35
MATR3-231	ENST00000502394	TTC30A	Q86WT1	665 aa		12.89	□□□□□ -0.35
MATR3-231	ENST00000502394	METTL23	Q86XA0	190 aa		12.89	□□□□□ -0.35
MATR3-231	ENST00000502394	PHF13	Q86YI8	300 aa	Predicted RBP	12.89	□□□□□ -0.35
MATR3-231	ENST00000502394	TNS4	Q8IZW8	715 aa		12.89	□□□□□ -0.35
MATR3-231	ENST00000502394	COLGALT1	Q8NBJ5	622 aa		12.89	□□□□□ -0.35
MATR3-231	ENST00000502394	OR10T2	Q8NGX3	314 aa		12.89	□□□□□ -0.35
MATR3-231	ENST00000502394	CLP1	Q92989	425 aa	Known RBP	12.89	□□□□□ -0.35
MATR3-231	ENST00000502394	ZNF558	Q96NG5	402 aa		12.89	□□□□□ -0.35
MATR3-231	ENST00000502394	YME1L1	Q96TA2	773 aa		12.89	□□□□□ -0.35
MATR3-231	ENST00000502394	SYT15	Q9BQS2	421 aa		12.89	□□□□□ -0.35
MATR3-231	ENST00000502394	ZNF518B	Q9C0D4	1074 aa		12.89	□□□□□ -0.35
MATR3-231	ENST00000502394	PUF60	Q9UHX1	559 aa	Known RBP	12.89	□□□□□ -0.35
MATR3-231	ENST00000502394	CYTH4	Q9UIA0	394 aa		12.89	□□□□□ -0.35
MATR3-231	ENST00000502394	TSPAN16	Q9UKR8	245 aa		12.89	□□□□□ -0.35
MATR3-231	ENST00000502394	NR2E3	Q9Y5X4	410 aa		12.89	□□□□□ -0.35
MATR3-231	ENST00000502394	SLC4A7	Q9Y6M7	1214 aa		12.89	□□□□□ -0.35
MATR3-231	ENST00000502394	NCAN	O14594	1321 aa		12.88	□□□□□ -0.35
MATR3-231	ENST00000502394	ANKRD62	A6NC57	917 aa		12.88	□□□□□ -0.35
MATR3-231	ENST00000502394	FTL	P02792	175 aa	Predicted RBP	12.88	□□□□□ -0.35
MATR3-231	ENST00000502394	TMEM253	P0C7T8	217 aa		12.88	□□□□□ -0.35
MATR3-231	ENST00000502394	ATP2A2	P16615	1042 aa	Known RBP	12.88	□□□□□ -0.35
MATR3-231	ENST00000502394	COL9A1	P20849	921 aa		12.88	□□□□□ -0.35
MATR3-231	ENST00000502394	ACAT1	P24752	427 aa	Known RBP	12.88	□□□□□ -0.35
MATR3-231	ENST00000502394	SSTR3	P32745	418 aa	Predicted RBP	12.88	□□□□□ -0.35
MATR3-231	ENST00000502394	ALDH7A1	P49419	539 aa	Known RBP	12.88	□□□□□ -0.35
MATR3-231	ENST00000502394	PSMC1	P62191	440 aa	Known RBP	12.88	□□□□□ -0.35
MATR3-231	ENST00000502394	YWHAH	Q04917	246 aa	Predicted RBP	12.88	□□□□□ -0.35
MATR3-231	ENST00000502394	TCEAL1	Q15170	157 aa		12.88	□□□□□ -0.35
MATR3-231	ENST00000502394	C9orf50	Q5SZB4	431 aa		12.88	□□□□□ -0.35
MATR3-231	ENST00000502394	NAA35	Q5VZE5	725 aa		12.88	□□□□□ -0.35
MATR3-231	ENST00000502394	PPP1R2P3	Q6NXS1	205 aa		12.88	□□□□□ -0.35
MATR3-231	ENST00000502394	NYAP1	Q6ZVC0	841 aa		12.88	□□□□□ -0.35
MATR3-231	ENST00000502394	KIAA1328	Q86T90	577 aa		12.88	□□□□□ -0.35
MATR3-231	ENST00000502394	PASD1	Q8IV76	773 aa		12.88	□□□□□ -0.35
MATR3-231	ENST00000502394	MCOLN2	Q8IZK6	566 aa		12.88	□□□□□ -0.35
MATR3-231	ENST00000502394	FUK	Q8N0W3	1084 aa		12.88	□□□□□ -0.35
MATR3-231	ENST00000502394	TMEM35B	Q8NCS4	154 aa		12.88	□□□□□ -0.35
MATR3-231	ENST00000502394	C1orf131	Q8NDD1	294 aa	Known RBP	12.88	□□□□□ -0.35
MATR3-231	ENST00000502394	RAD9A	Q99638	391 aa		12.88	□□□□□ -0.35
MATR3-231	ENST00000502394	HNRNPAB	Q99729	332 aa	Known RBP	12.88	□□□□□ -0.35
MATR3-231	ENST00000502394	MTIF3	Q9H2K0	278 aa	Known RBP	12.88	□□□□□ -0.35
MATR3-231	ENST00000502394	LUC7L	Q9NQ29	371 aa	Known RBP	12.88	□□□□□ -0.35
MATR3-231	ENST00000502394	CHST7	Q9NS84	486 aa		12.88	□□□□□ -0.35
MATR3-231	ENST00000502394	SEPT11	Q9NVA2	429 aa	Known RBP	12.88	□□□□□ -0.35
MATR3-231	ENST00000502394	TRIM10	Q9UDY6	481 aa		12.88	□□□□□ -0.35
MATR3-231	ENST00000502394	SALL4	Q9UJQ4	1053 aa		12.88	□□□□□ -0.35
MATR3-231	ENST00000502394	INSL6	Q9Y581	213 aa		12.88	□□□□□ -0.35
MATR3-231	ENST00000502394	KIAA1671	Q9BY89	1806 aa		12.88	□□□□□ -0.35
MATR3-231	ENST00000502394		A0A0A6YYK5	440 aa	Predicted RBP	12.87	□□□□□ -0.35
MATR3-231	ENST00000502394	MYBPHL	A2RUH7	354 aa		12.87	□□□□□ -0.35
MATR3-231	ENST00000502394	TMCO5B	A8MYB1	307 aa		12.87	□□□□□ -0.35
MATR3-231	ENST00000502394	CYP1A2	P05177	515 aa		12.87	□□□□□ -0.35
MATR3-231	ENST00000502394	SETSIP	P0DME0	302 aa		12.87	□□□□□ -0.35
MATR3-231	ENST00000502394	CCDC130	P13994	396 aa		12.87	□□□□□ -0.35
MATR3-231	ENST00000502394	MMP8	P22894	467 aa		12.87	□□□□□ -0.35
MATR3-231	ENST00000502394	RPL34	P49207	117 aa	Known RBP	12.87	□□□□□ -0.35
MATR3-231	ENST00000502394	GSC	P56915	257 aa	Predicted RBP	12.87	□□□□□ -0.35
MATR3-231	ENST00000502394	PLCB3	Q01970	1234 aa		12.87	□□□□□ -0.35
MATR3-231	ENST00000502394	GOLGA7B	Q2TAP0	167 aa		12.87	□□□□□ -0.35
MATR3-231	ENST00000502394	RTP2	Q5QGT7	225 aa		12.87	□□□□□ -0.35
MATR3-231	ENST00000502394	FAM171A1	Q5VUB5	890 aa		12.87	□□□□□ -0.35
MATR3-231	ENST00000502394	TAS1R1	Q7RTX1	841 aa		12.87	□□□□□ -0.35
MATR3-231	ENST00000502394	LRRTM3	Q86VH5	581 aa		12.87	□□□□□ -0.35
MATR3-231	ENST00000502394	TXLNB	Q8N3L3	684 aa		12.87	□□□□□ -0.35
MATR3-231	ENST00000502394	ANKRD52	Q8NB46	1076 aa		12.87	□□□□□ -0.35
MATR3-231	ENST00000502394	MYCBPAP	Q8TBZ2	947 aa		12.87	□□□□□ -0.35
MATR3-231	ENST00000502394	CPA5	Q8WXQ8	436 aa		12.87	□□□□□ -0.35
MATR3-231	ENST00000502394	ARHGEF26	Q96DR7	871 aa		12.87	□□□□□ -0.35
MATR3-231	ENST00000502394	VCPIP1	Q96JH7	1222 aa		12.87	□□□□□ -0.35
MATR3-231	ENST00000502394	TMEM209	Q96SK2	561 aa		12.87	□□□□□ -0.35
MATR3-231	ENST00000502394	GDF15	Q99988	308 aa		12.87	□□□□□ -0.35
MATR3-231	ENST00000502394	HERC2P3	Q9BVR0	1158 aa		12.87	□□□□□ -0.35
MATR3-231	ENST00000502394	B3GNT5	Q9BYG0	378 aa		12.87	□□□□□ -0.35
MATR3-231	ENST00000502394	TSGA10	Q9BZW7	698 aa		12.87	□□□□□ -0.35
MATR3-231	ENST00000502394	DNAI2	Q9GZS0	605 aa		12.87	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms