RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 RAPGEF4Q8WZA2 1011 aa3.11□□□□□ -1.91
SMAD1-203ENST00000502342 TSR2Q969E8 191 aaKnown RBP3.11□□□□□ -1.91
SMAD1-203ENST00000502342 RFKQ969G6 155 aa3.11□□□□□ -1.91
SMAD1-203ENST00000502342 PBKQ96KB5 322 aa3.11□□□□□ -1.91
SMAD1-203ENST00000502342 PTDSS2Q9BVG9 487 aa3.11□□□□□ -1.91
SMAD1-203ENST00000502342 B3GNT5Q9BYG0 378 aa3.11□□□□□ -1.91
SMAD1-203ENST00000502342 ARHGEF3Q9NR81 526 aa3.11□□□□□ -1.91
SMAD1-203ENST00000502342 ZSCAN32Q9NX65 697 aa3.11□□□□□ -1.91
SMAD1-203ENST00000502342 DDX20Q9UHI6 824 aaKnown RBP3.11□□□□□ -1.91
SMAD1-203ENST00000502342 ADAM21Q9UKJ8 722 aa3.11□□□□□ -1.91
SMAD1-203ENST00000502342 SHOC2Q9UQ13 582 aa3.11□□□□□ -1.91
SMAD1-203ENST00000502342 WDR27A2RRH5 827 aa3.1□□□□□ -1.91
SMAD1-203ENST00000502342 GOLGA6CA6NDK9 693 aa3.1□□□□□ -1.91
SMAD1-203ENST00000502342 GOLGA6BA6NDN3 693 aa3.1□□□□□ -1.91
SMAD1-203ENST00000502342 CAPN8A6NHC0 703 aa3.1□□□□□ -1.91
SMAD1-203ENST00000502342 BTN3A1O00481 513 aa3.1□□□□□ -1.91
SMAD1-203ENST00000502342 PPM1GO15355 546 aaPredicted RBP3.1□□□□□ -1.91
SMAD1-203ENST00000502342 SLC16A3O15427 465 aaKnown RBP3.1□□□□□ -1.91
SMAD1-203ENST00000502342 TLR5O60602 858 aa3.1□□□□□ -1.91
SMAD1-203ENST00000502342 URI1O94763 535 aaPredicted RBP3.1□□□□□ -1.91
SMAD1-203ENST00000502342 NXPH3O95157 252 aa3.1□□□□□ -1.91
SMAD1-203ENST00000502342 SCGB1D2O95969 90 aa3.1□□□□□ -1.91
SMAD1-203ENST00000502342 C1RP00736 705 aa3.1□□□□□ -1.91
SMAD1-203ENST00000502342 EBLN1P0CF75 366 aa3.1□□□□□ -1.91
SMAD1-203ENST00000502342 GOLGA6DP0CG33 693 aa3.1□□□□□ -1.91
SMAD1-203ENST00000502342 CYP2C9P11712 490 aa3.1□□□□□ -1.91
SMAD1-203ENST00000502342 JUPP14923 745 aa3.1□□□□□ -1.91
SMAD1-203ENST00000502342 NPR1P16066 1061 aa3.1□□□□□ -1.91
SMAD1-203ENST00000502342 ZKSCAN1P17029 563 aaPredicted RBP3.1□□□□□ -1.91
SMAD1-203ENST00000502342 SLC7A1P30825 629 aa3.1□□□□□ -1.91
SMAD1-203ENST00000502342 LIPAP38571 399 aa3.1□□□□□ -1.91
SMAD1-203ENST00000502342 SLC11A2P49281 568 aa3.1□□□□□ -1.91
SMAD1-203ENST00000502342 CCT8P50990 548 aa3.1□□□□□ -1.91
SMAD1-203ENST00000502342 CLCN2P51788 898 aa3.1□□□□□ -1.91
SMAD1-203ENST00000502342 LOXL3P58215 753 aa3.1□□□□□ -1.91
SMAD1-203ENST00000502342 CCDC142Q17RM4 750 aa3.1□□□□□ -1.91
SMAD1-203ENST00000502342 LY6KQ17RY6 165 aa3.1□□□□□ -1.91
SMAD1-203ENST00000502342 TREML2Q5T2D2 321 aa3.1□□□□□ -1.91
SMAD1-203ENST00000502342 TEDDM1Q5T9Z0 273 aa3.1□□□□□ -1.91
SMAD1-203ENST00000502342 LMBRD2Q68DH5 695 aaPredicted RBP3.1□□□□□ -1.91
SMAD1-203ENST00000502342 RGS7BPQ6MZT1 257 aaPredicted RBP3.1□□□□□ -1.91
SMAD1-203ENST00000502342 SYCE2Q6PIF2 218 aa3.1□□□□□ -1.91
SMAD1-203ENST00000502342 ZNF551Q7Z340 670 aaPredicted RBP3.1□□□□□ -1.91
SMAD1-203ENST00000502342 MAVSQ7Z434 540 aa3.1□□□□□ -1.91
SMAD1-203ENST00000502342 C14orf80Q86SX3 495 aa3.1□□□□□ -1.91
SMAD1-203ENST00000502342 PRIMA1Q86XR5 153 aa3.1□□□□□ -1.91
SMAD1-203ENST00000502342 PPP2R3CQ969Q6 453 aa3.1□□□□□ -1.91
SMAD1-203ENST00000502342 ZNF764Q96H86 408 aaPredicted RBP3.1□□□□□ -1.91
SMAD1-203ENST00000502342 MS4A7Q9GZW8 240 aaPredicted RBP3.1□□□□□ -1.91
SMAD1-203ENST00000502342 FAM204AQ9H8W3 233 aa3.1□□□□□ -1.91
SMAD1-203ENST00000502342 ADARB2Q9NS39 739 aaKnown RBP3.1□□□□□ -1.91
SMAD1-203ENST00000502342 C1orf112Q9NSG2 853 aa3.1□□□□□ -1.91
SMAD1-203ENST00000502342 SACM1LQ9NTJ5 587 aa3.1□□□□□ -1.91
SMAD1-203ENST00000502342 GOLGA6AQ9NYA3 693 aa3.1□□□□□ -1.91
SMAD1-203ENST00000502342 CPNE7Q9UBL6 633 aa3.1□□□□□ -1.91
SMAD1-203ENST00000502342 NDRG4Q9ULP0 352 aaKnown RBP3.1□□□□□ -1.91
SMAD1-203ENST00000502342 SSX2IPQ9Y2D8 614 aa3.1□□□□□ -1.91
SMAD1-203ENST00000502342 MED16Q9Y2X0 877 aa3.1□□□□□ -1.91
SMAD1-203ENST00000502342 ENTPD2Q9Y5L3 495 aa3.1□□□□□ -1.91
SMAD1-203ENST00000502342 WNT6Q9Y6F9 365 aa3.1□□□□□ -1.91
SMAD1-203ENST00000502342 FER1L4A9Z1Z3 1794 aa3.1□□□□□ -1.91
SMAD1-203ENST00000502342 GCOM1H8Y6P7 765 aaPredicted RBP3.09□□□□□ -1.91
SMAD1-203ENST00000502342 QSOX1O00391 747 aa3.09□□□□□ -1.91
SMAD1-203ENST00000502342 ERC2O15083 957 aa3.09□□□□□ -1.91
SMAD1-203ENST00000502342 PHGDHO43175 533 aaKnown RBP3.09□□□□□ -1.91
SMAD1-203ENST00000502342 FESP07332 822 aa3.09□□□□□ -1.91
SMAD1-203ENST00000502342 HNRNPCP07910 306 aaKnown RBP eCLIP3.09□□□□□ -1.91
SMAD1-203ENST00000502342 ADORA2AP29274 412 aa3.09□□□□□ -1.91
SMAD1-203ENST00000502342 LRPAP1P30533 357 aa3.09□□□□□ -1.91
SMAD1-203ENST00000502342 CYP2C18P33260 490 aa3.09□□□□□ -1.91
SMAD1-203ENST00000502342 VIPR2P41587 438 aa3.09□□□□□ -1.91
SMAD1-203ENST00000502342 AGFG1P52594 562 aaKnown RBP3.09□□□□□ -1.91
SMAD1-203ENST00000502342 PRKAG1P54619 331 aa3.09□□□□□ -1.91
SMAD1-203ENST00000502342 SUMO3P55854 103 aaPredicted RBP3.09□□□□□ -1.91
SMAD1-203ENST00000502342 SOX10P56693 466 aa3.09□□□□□ -1.91
SMAD1-203ENST00000502342 C21orf58P58505 322 aa3.09□□□□□ -1.91
SMAD1-203ENST00000502342 SLC13A2Q13183 592 aa3.09□□□□□ -1.91
SMAD1-203ENST00000502342 PTCHD3Q3KNS1 767 aa3.09□□□□□ -1.91
SMAD1-203ENST00000502342 ZIK1Q3SY52 487 aaPredicted RBP3.09□□□□□ -1.91
SMAD1-203ENST00000502342 MGAT5BQ3V5L5 792 aa3.09□□□□□ -1.91
SMAD1-203ENST00000502342 SLC44A4Q53GD3 710 aa3.09□□□□□ -1.91
SMAD1-203ENST00000502342 ZNF618Q5T7W0 954 aa3.09□□□□□ -1.91
SMAD1-203ENST00000502342 DEPDC1Q5TB30 811 aa3.09□□□□□ -1.91
SMAD1-203ENST00000502342 SWSAP1Q6NVH7 229 aa3.09□□□□□ -1.91
SMAD1-203ENST00000502342 ZDHHC24Q6UX98 284 aa3.09□□□□□ -1.91
SMAD1-203ENST00000502342 MAEAQ7L5Y9 396 aa3.09□□□□□ -1.91
SMAD1-203ENST00000502342 DTX2Q86UW9 622 aa3.09□□□□□ -1.91
SMAD1-203ENST00000502342 WDR75Q8IWA0 830 aaKnown RBP3.09□□□□□ -1.91
SMAD1-203ENST00000502342 SLC15A3Q8IY34 581 aa3.09□□□□□ -1.91
SMAD1-203ENST00000502342 MYO1HQ8N1T3 1032 aa3.09□□□□□ -1.91
SMAD1-203ENST00000502342 FAM109AQ8N4B1 249 aa3.09□□□□□ -1.91
SMAD1-203ENST00000502342 MAGEB6Q8N7X4 407 aa3.09□□□□□ -1.91
SMAD1-203ENST00000502342 FANCBQ8NB91 859 aa3.09□□□□□ -1.91
SMAD1-203ENST00000502342 IL31RAQ8NI17 732 aa3.09□□□□□ -1.91
SMAD1-203ENST00000502342 KBTBD7Q8WVZ9 684 aa3.09□□□□□ -1.91
SMAD1-203ENST00000502342 XAGE5Q8WWM1 108 aa3.09□□□□□ -1.91
SMAD1-203ENST00000502342 DDB2Q92466 427 aa3.09□□□□□ -1.91
SMAD1-203ENST00000502342 GLG1Q92896 1179 aa3.09□□□□□ -1.91
SMAD1-203ENST00000502342 RUNDC1Q96C34 613 aa3.09□□□□□ -1.91
SMAD1-203ENST00000502342 TIMP4Q99727 224 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms