RNA–Protein interactions for RNA: ENST00000502066.6

CRNDE-202, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best)

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-202ENST00000502066 KARSQ15046 597 aaKnown RBP7.58□□□□□ -1.2
CRNDE-202ENST00000502066 SKIDA1Q1XH10 827 aa7.58□□□□□ -1.2
CRNDE-202ENST00000502066 LRRC55Q6ZSA7 311 aa7.58□□□□□ -1.2
CRNDE-202ENST00000502066 MAMDC2Q7Z304 686 aaPredicted RBP7.58□□□□□ -1.2
CRNDE-202ENST00000502066 TMC6Q7Z403 805 aa7.58□□□□□ -1.2
CRNDE-202ENST00000502066 DDX53Q86TM3 631 aaKnown RBP7.58□□□□□ -1.2
CRNDE-202ENST00000502066 ARID3BQ8IVW6 561 aaPredicted RBP7.58□□□□□ -1.2
CRNDE-202ENST00000502066 ENOX1Q8TC92 643 aaKnown RBP7.58□□□□□ -1.2
CRNDE-202ENST00000502066 SNRNP27Q8WVK2 155 aaKnown RBP7.58□□□□□ -1.2
CRNDE-202ENST00000502066 PLEKHF1Q96S99 279 aa7.58□□□□□ -1.2
CRNDE-202ENST00000502066 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.58□□□□□ -1.2
CRNDE-202ENST00000502066 AGO3Q9H9G7 860 aaKnown RBP7.58□□□□□ -1.2
CRNDE-202ENST00000502066 SLC38A10Q9HBR0 1119 aa7.58□□□□□ -1.2
CRNDE-202ENST00000502066 TMEM74BQ9NUR3 256 aa7.58□□□□□ -1.2
CRNDE-202ENST00000502066 CYP39A1Q9NYL5 469 aa7.58□□□□□ -1.2
CRNDE-202ENST00000502066 RAI14Q9P0K7 980 aa7.58□□□□□ -1.2
CRNDE-202ENST00000502066 KNTC1P50748 2209 aa7.58□□□□□ -1.2
CRNDE-202ENST00000502066 CSPG4Q6UVK1 2322 aa7.57□□□□□ -1.2
CRNDE-202ENST00000502066 CTSAP10619 480 aa7.57□□□□□ -1.2
CRNDE-202ENST00000502066 EPHA5P54756 1037 aa7.57□□□□□ -1.2
CRNDE-202ENST00000502066 RIPK4P57078 832 aa7.57□□□□□ -1.2
CRNDE-202ENST00000502066 FAM160A1Q05DH4 1040 aa7.57□□□□□ -1.2
CRNDE-202ENST00000502066 KLRC3Q07444 240 aa7.57□□□□□ -1.2
CRNDE-202ENST00000502066 SMAD1Q15797 465 aaKnown RBP7.57□□□□□ -1.2
CRNDE-202ENST00000502066 LY6KQ17RY6 165 aa7.57□□□□□ -1.2
CRNDE-202ENST00000502066 CCDC27Q2M243 656 aa7.57□□□□□ -1.2
CRNDE-202ENST00000502066 LINC00303Q3SY05 128 aa7.57□□□□□ -1.2
CRNDE-202ENST00000502066 BBS9Q3SYG4 887 aa7.57□□□□□ -1.2
CRNDE-202ENST00000502066 CCDC157Q569K6 752 aa7.57□□□□□ -1.2
CRNDE-202ENST00000502066 FBXO47Q5MNV8 452 aa7.57□□□□□ -1.2
CRNDE-202ENST00000502066 DIEXFQ68CQ4 756 aaKnown RBP7.57□□□□□ -1.2
CRNDE-202ENST00000502066 TSHZ1Q6ZSZ6 1077 aa7.57□□□□□ -1.2
CRNDE-202ENST00000502066 TMEM179Q6ZVK1 233 aa7.57□□□□□ -1.2
CRNDE-202ENST00000502066 ERICH1Q86X53 443 aa7.57□□□□□ -1.2
CRNDE-202ENST00000502066 SLC39A11Q8N1S5 342 aa7.57□□□□□ -1.2
CRNDE-202ENST00000502066 TP53I13Q8NBR0 393 aaPredicted RBP7.57□□□□□ -1.2
CRNDE-202ENST00000502066 DAGLBQ8NCG7 672 aa7.57□□□□□ -1.2
CRNDE-202ENST00000502066 FBXO27Q8NI29 283 aa7.57□□□□□ -1.2
CRNDE-202ENST00000502066 KLHDC4Q8TBB5 520 aa7.57□□□□□ -1.2
CRNDE-202ENST00000502066 FGF13Q92913 245 aa7.57□□□□□ -1.2
CRNDE-202ENST00000502066 FTHL17Q9BXU8 183 aa7.57□□□□□ -1.2
CRNDE-202ENST00000502066 TMPRSS5Q9H3S3 457 aa7.57□□□□□ -1.2
CRNDE-202ENST00000502066 RNPEPQ9H4A4 650 aa7.57□□□□□ -1.2
CRNDE-202ENST00000502066 BRD9Q9H8M2 597 aa7.57□□□□□ -1.2
CRNDE-202ENST00000502066 PRDM16Q9HAZ2 1276 aa7.57□□□□□ -1.2
CRNDE-202ENST00000502066 SLC8A2Q9UPR5 921 aa7.57□□□□□ -1.2
CRNDE-202ENST00000502066 SUPT16HQ9Y5B9 1047 aaKnown RBP7.57□□□□□ -1.2
CRNDE-202ENST00000502066 BSNQ9UPA5 3926 aa7.57□□□□□ -1.2
CRNDE-202ENST00000502066 NBEAL2Q6ZNJ1 2754 aa7.56□□□□□ -1.2
CRNDE-202ENST00000502066 FLNAP21333 2647 aaKnown RBP7.56□□□□□ -1.2
CRNDE-202ENST00000502066 CCDC168Q8NDH2 2452 aa7.56□□□□□ -1.2
CRNDE-202ENST00000502066 PDCD11Q14690 1871 aaKnown RBP7.56□□□□□ -1.2
CRNDE-202ENST00000502066 COL4A2P08572 1712 aa7.56□□□□□ -1.2
CRNDE-202ENST00000502066 A0A087X0B3 334 aa7.56□□□□□ -1.2
CRNDE-202ENST00000502066 ANO9A1A5B4 782 aa7.56□□□□□ -1.2
CRNDE-202ENST00000502066 NUDT19A8MXV4 375 aa7.56□□□□□ -1.2
CRNDE-202ENST00000502066 CBFA2T3O75081 653 aa7.56□□□□□ -1.2
CRNDE-202ENST00000502066 UBOX5O94941 541 aa7.56□□□□□ -1.2
CRNDE-202ENST00000502066 FGFR1P11362 822 aa7.56□□□□□ -1.2
CRNDE-202ENST00000502066 ACTN2P35609 894 aa7.56□□□□□ -1.2
CRNDE-202ENST00000502066 SARSP49591 514 aaKnown RBP7.56□□□□□ -1.2
CRNDE-202ENST00000502066 METAP2P50579 478 aaKnown RBP eCLIP7.56□□□□□ -1.2
CRNDE-202ENST00000502066 ERVFRD-1P60508 538 aa7.56□□□□□ -1.2
CRNDE-202ENST00000502066 PLP2Q04941 152 aa7.56□□□□□ -1.2
CRNDE-202ENST00000502066 GFPT1Q06210 699 aaPredicted RBP7.56□□□□□ -1.2
CRNDE-202ENST00000502066 ERICH6BQ5W0A0 696 aa7.56□□□□□ -1.2
CRNDE-202ENST00000502066 PKN3Q6P5Z2 889 aa7.56□□□□□ -1.2
CRNDE-202ENST00000502066 NSMFQ6X4W1 530 aa7.56□□□□□ -1.2
CRNDE-202ENST00000502066 LINS1Q8NG48 757 aa7.56□□□□□ -1.2
CRNDE-202ENST00000502066 BDH2Q9BUT1 245 aa7.56□□□□□ -1.2
CRNDE-202ENST00000502066 POLR3BQ9NW08 1133 aaPredicted RBP7.56□□□□□ -1.2
CRNDE-202ENST00000502066 ADD3Q9UEY8 706 aaKnown RBP7.56□□□□□ -1.2
CRNDE-202ENST00000502066 PLAAQ9Y263 795 aa7.56□□□□□ -1.2
CRNDE-202ENST00000502066 ATXN2Q99700 1313 aaKnown RBP7.55□□□□□ -1.2
CRNDE-202ENST00000502066 PRICKLE3O43900 615 aaPredicted RBP7.55□□□□□ -1.2
CRNDE-202ENST00000502066 BRINP1O60477 761 aa7.55□□□□□ -1.2
CRNDE-202ENST00000502066 SIX3O95343 332 aaPredicted RBP7.55□□□□□ -1.2
CRNDE-202ENST00000502066 CLDN1O95832 211 aa7.55□□□□□ -1.2
CRNDE-202ENST00000502066 MPOP05164 745 aa7.55□□□□□ -1.2
CRNDE-202ENST00000502066 CNPP09543 421 aaKnown RBP7.55□□□□□ -1.2
CRNDE-202ENST00000502066 SMIM10L2AP0DMW4 78 aa7.55□□□□□ -1.2
CRNDE-202ENST00000502066 SMIM10L2BP0DMW5 78 aa7.55□□□□□ -1.2
CRNDE-202ENST00000502066 ALAS1P13196 640 aa7.55□□□□□ -1.2
CRNDE-202ENST00000502066 NTHL1P78549 312 aa7.55□□□□□ -1.2
CRNDE-202ENST00000502066 MGAT3Q09327 533 aa7.55□□□□□ -1.2
CRNDE-202ENST00000502066 SLC14A1Q13336 389 aa7.55□□□□□ -1.2
CRNDE-202ENST00000502066 RTP5Q14D33 572 aa7.55□□□□□ -1.2
CRNDE-202ENST00000502066 DGKKQ5KSL6 1271 aa7.55□□□□□ -1.2
CRNDE-202ENST00000502066 PTRH1Q86Y79 214 aaKnown RBP7.55□□□□□ -1.2
CRNDE-202ENST00000502066 ZNF280BQ86YH2 543 aa7.55□□□□□ -1.2
CRNDE-202ENST00000502066 ZNF655Q8N720 491 aaPredicted RBP7.55□□□□□ -1.2
CRNDE-202ENST00000502066 LINC01356Q8N9X3 169 aa7.55□□□□□ -1.2
CRNDE-202ENST00000502066 ZNF248Q8NDW4 579 aa7.55□□□□□ -1.2
CRNDE-202ENST00000502066 SETD7Q8WTS6 366 aaKnown RBP7.55□□□□□ -1.2
CRNDE-202ENST00000502066 TMEM169Q96HH4 297 aa7.55□□□□□ -1.2
CRNDE-202ENST00000502066 NT5C3AQ9H0P0 336 aa7.55□□□□□ -1.2
CRNDE-202ENST00000502066 GPR55Q9Y2T6 319 aaPredicted RBP7.55□□□□□ -1.2
CRNDE-202ENST00000502066 MYO16Q9Y6X6 1858 aa7.55□□□□□ -1.2
CRNDE-202ENST00000502066 TNRC6BQ9UPQ9 1833 aaKnown RBP7.55□□□□□ -1.2
CRNDE-202ENST00000502066 GON4LQ3T8J9 2241 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms