RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 TMLHEQ9NVH6 421 aa12.93□□□□□ -0.34
CNOT4-211ENST00000498534 RBAKQ9NYW8 714 aaPredicted RBP12.93□□□□□ -0.34
CNOT4-211ENST00000498534 ITGA11Q9UKX5 1188 aa12.93□□□□□ -0.34
CNOT4-211ENST00000498534 CCL26Q9Y258 94 aa12.93□□□□□ -0.34
CNOT4-211ENST00000498534 AXIN1O15169 862 aa12.92□□□□□ -0.34
CNOT4-211ENST00000498534 EXTL3O43909 919 aa12.92□□□□□ -0.34
CNOT4-211ENST00000498534 CENPBP07199 599 aaPredicted RBP12.92□□□□□ -0.34
CNOT4-211ENST00000498534 DRD1P21728 446 aa12.92□□□□□ -0.34
CNOT4-211ENST00000498534 CYP2F1P24903 491 aa12.92□□□□□ -0.34
CNOT4-211ENST00000498534 PCSK1P29120 753 aa12.92□□□□□ -0.34
CNOT4-211ENST00000498534 CEBPZQ03701 1054 aaKnown RBP12.92□□□□□ -0.34
CNOT4-211ENST00000498534 MYO1EQ12965 1108 aa12.92□□□□□ -0.34
CNOT4-211ENST00000498534 ZNF268Q14587 947 aaPredicted RBP12.92□□□□□ -0.34
CNOT4-211ENST00000498534 CACNA2D4Q7Z3S7 1137 aa12.92□□□□□ -0.34
CNOT4-211ENST00000498534 SPATA2LQ8IUW3 424 aaPredicted RBP12.92□□□□□ -0.34
CNOT4-211ENST00000498534 CAMKK1Q8N5S9 505 aa12.92□□□□□ -0.34
CNOT4-211ENST00000498534 C1orf127Q8N9H9 656 aa12.92□□□□□ -0.34
CNOT4-211ENST00000498534 FSIP1Q8NA03 581 aa12.92□□□□□ -0.34
CNOT4-211ENST00000498534 SPATA18Q8TC71 538 aa12.92□□□□□ -0.34
CNOT4-211ENST00000498534 LEO1Q8WVC0 666 aaPredicted RBP12.92□□□□□ -0.34
CNOT4-211ENST00000498534 DDX1Q92499 740 aaKnown RBP12.92□□□□□ -0.34
CNOT4-211ENST00000498534 LOXL4Q96JB6 756 aa12.92□□□□□ -0.34
CNOT4-211ENST00000498534 CLIC6Q96NY7 704 aa12.92□□□□□ -0.34
CNOT4-211ENST00000498534 PANK2Q9BZ23 570 aa12.92□□□□□ -0.34
CNOT4-211ENST00000498534 HPS4Q9NQG7 708 aa12.92□□□□□ -0.34
CNOT4-211ENST00000498534 OLFML3Q9NRN5 406 aa12.92□□□□□ -0.34
CNOT4-211ENST00000498534 PANK4Q9NVE7 773 aa12.92□□□□□ -0.34
CNOT4-211ENST00000498534 C2orf42Q9NWW7 574 aa12.92□□□□□ -0.34
CNOT4-211ENST00000498534 GDAP2Q9NXN4 497 aa12.92□□□□□ -0.34
CNOT4-211ENST00000498534 FBXO2Q9UK22 296 aaPredicted RBP12.92□□□□□ -0.34
CNOT4-211ENST00000498534 GTF3C4Q9UKN8 822 aa12.92□□□□□ -0.34
CNOT4-211ENST00000498534 L1RE1Q9UN81 338 aa12.92□□□□□ -0.34
CNOT4-211ENST00000498534 SNX9Q9Y5X1 595 aa12.92□□□□□ -0.34
CNOT4-211ENST00000498534 ZNF638Q14966 1978 aaKnown RBP12.92□□□□□ -0.34
CNOT4-211ENST00000498534 SDK1Q7Z5N4 2213 aa12.92□□□□□ -0.34
CNOT4-211ENST00000498534 GOLGA8IPA6NC78 632 aa12.91□□□□□ -0.34
CNOT4-211ENST00000498534 GOLGA8JA6NMD2 632 aa12.91□□□□□ -0.34
CNOT4-211ENST00000498534 KIAA0391O15091 583 aaKnown RBP12.91□□□□□ -0.34
CNOT4-211ENST00000498534 RPP40O75818 363 aaKnown RBP12.91□□□□□ -0.34
CNOT4-211ENST00000498534 USP17L7P0C7H9 530 aa12.91□□□□□ -0.34
CNOT4-211ENST00000498534 TMEM191BP0C7N4 346 aa12.91□□□□□ -0.34
CNOT4-211ENST00000498534 CCDC192P0DO97 292 aa12.91□□□□□ -0.34
CNOT4-211ENST00000498534 ACAT1P24752 427 aaKnown RBP12.91□□□□□ -0.34
CNOT4-211ENST00000498534 STAT6P42226 847 aa12.91□□□□□ -0.34
CNOT4-211ENST00000498534 GPR15P49685 360 aa12.91□□□□□ -0.34
CNOT4-211ENST00000498534 GALK1P51570 392 aa12.91□□□□□ -0.34
CNOT4-211ENST00000498534 NR1H3Q13133 447 aa12.91□□□□□ -0.34
CNOT4-211ENST00000498534 FBXO43Q4G163 708 aa12.91□□□□□ -0.34
CNOT4-211ENST00000498534 PPM1JQ5JR12 505 aa12.91□□□□□ -0.34
CNOT4-211ENST00000498534 INTS6LQ5JSJ4 861 aaKnown RBP12.91□□□□□ -0.34
CNOT4-211ENST00000498534 SDHAF4Q5VUM1 108 aa12.91□□□□□ -0.34
CNOT4-211ENST00000498534 TRIM68Q6AZZ1 485 aa12.91□□□□□ -0.34
CNOT4-211ENST00000498534 IL31Q6EBC2 164 aa12.91□□□□□ -0.34
CNOT4-211ENST00000498534 FSTL4Q6MZW2 842 aa12.91□□□□□ -0.34
CNOT4-211ENST00000498534 STXBP4Q6ZWJ1 553 aa12.91□□□□□ -0.34
CNOT4-211ENST00000498534 DPH6Q7L8W6 267 aa12.91□□□□□ -0.34
CNOT4-211ENST00000498534 SCN4BQ8IWT1 228 aa12.91□□□□□ -0.34
CNOT4-211ENST00000498534 CPA6Q8N4T0 437 aa12.91□□□□□ -0.34
CNOT4-211ENST00000498534 TOP6BLQ8N6T0 577 aa12.91□□□□□ -0.34
CNOT4-211ENST00000498534 C12orf50Q8NA57 414 aaPredicted RBP12.91□□□□□ -0.34
CNOT4-211ENST00000498534 TTC16Q8NEE8 873 aa12.91□□□□□ -0.34
CNOT4-211ENST00000498534 GAB3Q8WWW8 586 aa12.91□□□□□ -0.34
CNOT4-211ENST00000498534 TRMT2BQ96GJ1 504 aaKnown RBP12.91□□□□□ -0.34
CNOT4-211ENST00000498534 ANKRD36BP1Q96IX9 119 aa12.91□□□□□ -0.34
CNOT4-211ENST00000498534 MYRFLQ96LU7 910 aa12.91□□□□□ -0.34
CNOT4-211ENST00000498534 CNTNAP3BQ96NU0 1288 aa12.91□□□□□ -0.34
CNOT4-211ENST00000498534 P2RY13Q9BPV8 354 aa12.91□□□□□ -0.34
CNOT4-211ENST00000498534 CNTNAP3Q9BZ76 1288 aa12.91□□□□□ -0.34
CNOT4-211ENST00000498534 PCIF1Q9H4Z3 704 aa12.91□□□□□ -0.34
CNOT4-211ENST00000498534 TRPC7Q9HCX4 862 aa12.91□□□□□ -0.34
CNOT4-211ENST00000498534 DUS2Q9NX74 493 aaKnown RBP12.91□□□□□ -0.34
CNOT4-211ENST00000498534 KIF26AQ9ULI4 1882 aaPredicted RBP12.91□□□□□ -0.34
CNOT4-211ENST00000498534 ACACBO00763 2458 aa12.9□□□□□ -0.34
CNOT4-211ENST00000498534 TRAV19A0A0A6YYK7 116 aa12.9□□□□□ -0.34
CNOT4-211ENST00000498534 OTOL1A6NHN0 477 aaPredicted RBP12.9□□□□□ -0.34
CNOT4-211ENST00000498534 ZNF233A6NK53 670 aa12.9□□□□□ -0.34
CNOT4-211ENST00000498534 NOL4O94818 638 aa12.9□□□□□ -0.34
CNOT4-211ENST00000498534 TNNC2P02585 160 aa12.9□□□□□ -0.34
CNOT4-211ENST00000498534 CKMP06732 381 aa12.9□□□□□ -0.34
CNOT4-211ENST00000498534 ARSAP15289 507 aa12.9□□□□□ -0.34
CNOT4-211ENST00000498534 IFNAR2P48551 515 aa12.9□□□□□ -0.34
CNOT4-211ENST00000498534 PXNP49023 591 aaPredicted RBP12.9□□□□□ -0.34
CNOT4-211ENST00000498534 FAM160A1Q05DH4 1040 aa12.9□□□□□ -0.34
CNOT4-211ENST00000498534 CUL4AQ13619 759 aa12.9□□□□□ -0.34
CNOT4-211ENST00000498534 SURF1Q15526 300 aa12.9□□□□□ -0.34
CNOT4-211ENST00000498534 DUOXA2Q1HG44 320 aa12.9□□□□□ -0.34
CNOT4-211ENST00000498534 CFAP221Q4G0U5 840 aa12.9□□□□□ -0.34
CNOT4-211ENST00000498534 AASDHQ4L235 1098 aaPredicted RBP12.9□□□□□ -0.34
CNOT4-211ENST00000498534 C4orf50Q6ZRC1 276 aa12.9□□□□□ -0.34
CNOT4-211ENST00000498534 CCDC65Q8IXS2 484 aa12.9□□□□□ -0.34
CNOT4-211ENST00000498534 ADGRF2Q8IZF7 708 aa12.9□□□□□ -0.34
CNOT4-211ENST00000498534 GPD1LQ8N335 351 aa12.9□□□□□ -0.34
CNOT4-211ENST00000498534 ZSWIM2Q8NEG5 633 aa12.9□□□□□ -0.34
CNOT4-211ENST00000498534 CCDC26Q8TAB7 109 aa12.9□□□□□ -0.34
CNOT4-211ENST00000498534 ATP2A3Q93084 1043 aa12.9□□□□□ -0.34
CNOT4-211ENST00000498534 FUBP3Q96I24 572 aaKnown RBP eCLIP12.9□□□□□ -0.34
CNOT4-211ENST00000498534 CYP2S1Q96SQ9 504 aa12.9□□□□□ -0.34
CNOT4-211ENST00000498534 LRRC27Q9C0I9 530 aa12.9□□□□□ -0.34
CNOT4-211ENST00000498534 ARRDC1-AS1Q9H2J1 176 aa12.9□□□□□ -0.34
CNOT4-211ENST00000498534 PDE11AQ9HCR9 933 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms