RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 RAB32Q13637 225 aa3.56□□□□□ -1.84
RIF1-212ENST00000498041 POLD3Q15054 466 aaPredicted RBP3.56□□□□□ -1.84
RIF1-212ENST00000498041 KRTAP15-1Q3LI76 137 aa3.56□□□□□ -1.84
RIF1-212ENST00000498041 SLC44A4Q53GD3 710 aa3.56□□□□□ -1.84
RIF1-212ENST00000498041 ICE2Q659A1 982 aa3.56□□□□□ -1.84
RIF1-212ENST00000498041 KAZNQ674X7 775 aa3.56□□□□□ -1.84
RIF1-212ENST00000498041 DGKHQ86XP1 1220 aa3.56□□□□□ -1.84
RIF1-212ENST00000498041 FAM109AQ8N4B1 249 aa3.56□□□□□ -1.84
RIF1-212ENST00000498041 SLC15A4Q8N697 577 aa3.56□□□□□ -1.84
RIF1-212ENST00000498041 CAGE1Q8TC20 777 aa3.56□□□□□ -1.84
RIF1-212ENST00000498041 PDLIM2Q96JY6 352 aa3.56□□□□□ -1.84
RIF1-212ENST00000498041 C8orf48Q96LL4 319 aa3.56□□□□□ -1.84
RIF1-212ENST00000498041 PTDSS2Q9BVG9 487 aa3.56□□□□□ -1.84
RIF1-212ENST00000498041 ACTRT3Q9BYD9 372 aa3.56□□□□□ -1.84
RIF1-212ENST00000498041 LRRC27Q9C0I9 530 aa3.56□□□□□ -1.84
RIF1-212ENST00000498041 SMURF2Q9HAU4 748 aa3.56□□□□□ -1.84
RIF1-212ENST00000498041 KLC4Q9NSK0 619 aa3.56□□□□□ -1.84
RIF1-212ENST00000498041 FOXJ2Q9P0K8 574 aa3.56□□□□□ -1.84
RIF1-212ENST00000498041 SHOC2Q9UQ13 582 aa3.56□□□□□ -1.84
RIF1-212ENST00000498041 SYNJ1O43426 1573 aa3.55□□□□□ -1.84
RIF1-212ENST00000498041 ADGRA2Q96PE1 1338 aa3.55□□□□□ -1.84
RIF1-212ENST00000498041 KIF3BO15066 747 aa3.55□□□□□ -1.84
RIF1-212ENST00000498041 TBX3O15119 743 aa3.55□□□□□ -1.84
RIF1-212ENST00000498041 MGEA5O60502 916 aa3.55□□□□□ -1.84
RIF1-212ENST00000498041 CHRM2P08172 466 aa3.55□□□□□ -1.84
RIF1-212ENST00000498041 MYF5P13349 255 aa3.55□□□□□ -1.84
RIF1-212ENST00000498041 BRAFP15056 766 aa3.55□□□□□ -1.84
RIF1-212ENST00000498041 RHCEP18577 417 aa3.55□□□□□ -1.84
RIF1-212ENST00000498041 PPIFP30405 207 aaKnown RBP3.55□□□□□ -1.84
RIF1-212ENST00000498041 LRPAP1P30533 357 aa3.55□□□□□ -1.84
RIF1-212ENST00000498041 RARRES1P49788 294 aa3.55□□□□□ -1.84
RIF1-212ENST00000498041 SIM1P81133 766 aaPredicted RBP3.55□□□□□ -1.84
RIF1-212ENST00000498041 RHDQ02161 417 aa3.55□□□□□ -1.84
RIF1-212ENST00000498041 CNGA2Q16280 664 aa3.55□□□□□ -1.84
RIF1-212ENST00000498041 PRR16Q569H4 304 aa3.55□□□□□ -1.84
RIF1-212ENST00000498041 VPS53Q5VIR6 699 aa3.55□□□□□ -1.84
RIF1-212ENST00000498041 CYB5RLQ6IPT4 315 aa3.55□□□□□ -1.84
RIF1-212ENST00000498041 GAS2L3Q86XJ1 694 aa3.55□□□□□ -1.84
RIF1-212ENST00000498041 MPP5Q8N3R9 675 aa3.55□□□□□ -1.84
RIF1-212ENST00000498041 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.55□□□□□ -1.84
RIF1-212ENST00000498041 TFAP2BQ92481 460 aa3.55□□□□□ -1.84
RIF1-212ENST00000498041 TTC17Q96AE7 1141 aa3.55□□□□□ -1.84
RIF1-212ENST00000498041 APIPQ96GX9 242 aa3.55□□□□□ -1.84
RIF1-212ENST00000498041 NAF1Q96HR8 494 aaKnown RBP3.55□□□□□ -1.84
RIF1-212ENST00000498041 MESP1Q9BRJ9 268 aa3.55□□□□□ -1.84
RIF1-212ENST00000498041 ALG8Q9BVK2 526 aa3.55□□□□□ -1.84
RIF1-212ENST00000498041 ZNF518BQ9C0D4 1074 aa3.55□□□□□ -1.84
RIF1-212ENST00000498041 BHMT2Q9H2M3 363 aa3.55□□□□□ -1.84
RIF1-212ENST00000498041 WDR26Q9H7D7 661 aa3.55□□□□□ -1.84
RIF1-212ENST00000498041 SYNPO2LQ9H987 977 aa3.55□□□□□ -1.84
RIF1-212ENST00000498041 KIAA1586Q9HCI6 787 aa3.55□□□□□ -1.84
RIF1-212ENST00000498041 ZSCAN32Q9NX65 697 aa3.55□□□□□ -1.84
RIF1-212ENST00000498041 CPNE7Q9UBL6 633 aa3.55□□□□□ -1.84
RIF1-212ENST00000498041 ZNHIT2Q9UHR6 403 aa3.55□□□□□ -1.84
RIF1-212ENST00000498041 BAZ1BQ9UIG0 1483 aaKnown RBP3.54□□□□□ -1.84
RIF1-212ENST00000498041 WDR27A2RRH5 827 aa3.54□□□□□ -1.84
RIF1-212ENST00000498041 ZAR1LA6NP61 321 aa3.54□□□□□ -1.84
RIF1-212ENST00000498041 ADM5C9JUS6 153 aa3.54□□□□□ -1.84
RIF1-212ENST00000498041 KIAA0355O15063 1070 aa3.54□□□□□ -1.84
RIF1-212ENST00000498041 MAP4K4O95819 1239 aaPredicted RBP3.54□□□□□ -1.84
RIF1-212ENST00000498041 BMP5P22003 454 aa3.54□□□□□ -1.84
RIF1-212ENST00000498041 PEX2P28328 305 aa3.54□□□□□ -1.84
RIF1-212ENST00000498041 GRIA3P42263 894 aa3.54□□□□□ -1.84
RIF1-212ENST00000498041 MAPK10P53779 464 aa3.54□□□□□ -1.84
RIF1-212ENST00000498041 FMO1Q01740 532 aa3.54□□□□□ -1.84
RIF1-212ENST00000498041 SEMA5AQ13591 1074 aa3.54□□□□□ -1.84
RIF1-212ENST00000498041 E2F2Q14209 437 aa3.54□□□□□ -1.84
RIF1-212ENST00000498041 GALEQ14376 348 aa3.54□□□□□ -1.84
RIF1-212ENST00000498041 TXNRD1Q16881 649 aa3.54□□□□□ -1.84
RIF1-212ENST00000498041 MGAT5BQ3V5L5 792 aa3.54□□□□□ -1.84
RIF1-212ENST00000498041 TEDDM1Q5T9Z0 273 aa3.54□□□□□ -1.84
RIF1-212ENST00000498041 ARHGAP40Q5TG30 622 aa3.54□□□□□ -1.84
RIF1-212ENST00000498041 PEG10Q86TG7 708 aaKnown RBP3.54□□□□□ -1.84
RIF1-212ENST00000498041 DTX2Q86UW9 622 aa3.54□□□□□ -1.84
RIF1-212ENST00000498041 SIMC1Q8NDZ2 872 aa3.54□□□□□ -1.84
RIF1-212ENST00000498041 FKBP10Q96AY3 582 aa3.54□□□□□ -1.84
RIF1-212ENST00000498041 TIFAQ96CG3 184 aa3.54□□□□□ -1.84
RIF1-212ENST00000498041 NMD3Q96D46 503 aaKnown RBP3.54□□□□□ -1.84
RIF1-212ENST00000498041 CCDC136Q96JN2 1154 aa3.54□□□□□ -1.84
RIF1-212ENST00000498041 PBKQ96KB5 322 aa3.54□□□□□ -1.84
RIF1-212ENST00000498041 DUSP26Q9BV47 211 aa3.54□□□□□ -1.84
RIF1-212ENST00000498041 MS4A7Q9GZW8 240 aaPredicted RBP3.54□□□□□ -1.84
RIF1-212ENST00000498041 ZNF287Q9HBT7 754 aa3.54□□□□□ -1.84
RIF1-212ENST00000498041 A1CFQ9NQ94 594 aaKnown RBP3.54□□□□□ -1.84
RIF1-212ENST00000498041 SACM1LQ9NTJ5 587 aa3.54□□□□□ -1.84
RIF1-212ENST00000498041 GEMIN8Q9NWZ8 242 aaKnown RBP3.54□□□□□ -1.84
RIF1-212ENST00000498041 EHD3Q9NZN3 535 aa3.54□□□□□ -1.84
RIF1-212ENST00000498041 AFF4Q9UHB7 1163 aaKnown RBP3.54□□□□□ -1.84
RIF1-212ENST00000498041 TLK1Q9UKI8 766 aa3.54□□□□□ -1.84
RIF1-212ENST00000498041 OGDHLQ9ULD0 1010 aa3.54□□□□□ -1.84
RIF1-212ENST00000498041 INSL6Q9Y581 213 aa3.54□□□□□ -1.84
RIF1-212ENST00000498041 COL11A2P13942 1736 aaPredicted RBP3.53□□□□□ -1.84
RIF1-212ENST00000498041 TRIM43BA6NCK2 446 aa3.53□□□□□ -1.84
RIF1-212ENST00000498041 MBD3L4A6NDZ8 208 aaPredicted RBP3.53□□□□□ -1.84
RIF1-212ENST00000498041 MBD3L3A6NE82 208 aaPredicted RBP3.53□□□□□ -1.84
RIF1-212ENST00000498041 VWC2LB2RUY7 222 aa3.53□□□□□ -1.84
RIF1-212ENST00000498041 TMEM233B4DJY2 109 aa3.53□□□□□ -1.84
RIF1-212ENST00000498041 PPM1DO15297 605 aa3.53□□□□□ -1.84
RIF1-212ENST00000498041 TLR5O60602 858 aa3.53□□□□□ -1.84
RIF1-212ENST00000498041 NUDT3O95989 172 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms