RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 HEATR3Q7Z4Q2 680 aa5.06□□□□□ -1.6
SMC4-227ENST00000497984 PNMA8AQ86V59 439 aaPredicted RBP5.06□□□□□ -1.6
SMC4-227ENST00000497984 CYP2W1Q8TAV3 490 aa5.06□□□□□ -1.6
SMC4-227ENST00000497984 C5orf34Q96MH7 638 aa5.06□□□□□ -1.6
SMC4-227ENST00000497984 ASB2Q96Q27 587 aa5.06□□□□□ -1.6
SMC4-227ENST00000497984 SLC13A1Q9BZW2 595 aa5.06□□□□□ -1.6
SMC4-227ENST00000497984 PDGFCQ9NRA1 345 aa5.06□□□□□ -1.6
SMC4-227ENST00000497984 TUBA8Q9NY65 449 aaPredicted RBP5.06□□□□□ -1.6
SMC4-227ENST00000497984 SERTAD3Q9UJW9 196 aa5.06□□□□□ -1.6
SMC4-227ENST00000497984 ADAMTS5Q9UNA0 930 aa5.06□□□□□ -1.6
SMC4-227ENST00000497984 SLC16A6O15403 523 aa5.05□□□□□ -1.6
SMC4-227ENST00000497984 FESP07332 822 aa5.05□□□□□ -1.6
SMC4-227ENST00000497984 MMP13P45452 471 aa5.05□□□□□ -1.6
SMC4-227ENST00000497984 LAMB3Q13751 1172 aa5.05□□□□□ -1.6
SMC4-227ENST00000497984 KRT73Q86Y46 540 aa5.05□□□□□ -1.6
SMC4-227ENST00000497984 PNLDC1Q8NA58 520 aaKnown RBP5.05□□□□□ -1.6
SMC4-227ENST00000497984 ATG4AQ8WYN0 398 aa5.05□□□□□ -1.6
SMC4-227ENST00000497984 MTMR8Q96EF0 704 aa5.05□□□□□ -1.6
SMC4-227ENST00000497984 RITA1Q96K30 269 aa5.05□□□□□ -1.6
SMC4-227ENST00000497984 ZC3H10Q96K80 434 aaKnown RBP5.05□□□□□ -1.6
SMC4-227ENST00000497984 TMEM79Q9BSE2 394 aa5.05□□□□□ -1.6
SMC4-227ENST00000497984 TTYH3Q9C0H2 523 aa5.05□□□□□ -1.6
SMC4-227ENST00000497984 FEZ2Q9UHY8 353 aaPredicted RBP5.05□□□□□ -1.6
SMC4-227ENST00000497984 TNKSO95271 1327 aa5.04□□□□□ -1.6
SMC4-227ENST00000497984 KATNA1O75449 491 aa5.04□□□□□ -1.6
SMC4-227ENST00000497984 BCAR3O75815 825 aa5.04□□□□□ -1.6
SMC4-227ENST00000497984 TJP3O95049 919 aa5.04□□□□□ -1.6
SMC4-227ENST00000497984 ATXN1LP0C7T5 689 aaKnown RBP5.04□□□□□ -1.6
SMC4-227ENST00000497984 TYRP14679 529 aa5.04□□□□□ -1.6
SMC4-227ENST00000497984 PDCP20941 246 aa5.04□□□□□ -1.6
SMC4-227ENST00000497984 PPIFP30405 207 aaKnown RBP5.04□□□□□ -1.6
SMC4-227ENST00000497984 CDKN1CP49918 316 aaPredicted RBP5.04□□□□□ -1.6
SMC4-227ENST00000497984 LOXL3P58215 753 aa5.04□□□□□ -1.6
SMC4-227ENST00000497984 KRTAP10-6P60371 365 aaPredicted RBP5.04□□□□□ -1.6
SMC4-227ENST00000497984 THEMIS2Q5TEJ8 643 aa5.04□□□□□ -1.6
SMC4-227ENST00000497984 TRIM72Q6ZMU5 477 aa5.04□□□□□ -1.6
SMC4-227ENST00000497984 PARS2Q7L3T8 475 aaKnown RBP5.04□□□□□ -1.6
SMC4-227ENST00000497984 PRR18Q8N4B5 295 aa5.04□□□□□ -1.6
SMC4-227ENST00000497984 LRRC71Q8N4P6 559 aa5.04□□□□□ -1.6
SMC4-227ENST00000497984 CPA6Q8N4T0 437 aa5.04□□□□□ -1.6
SMC4-227ENST00000497984 RP9Q8TA86 221 aaKnown RBP5.04□□□□□ -1.6
SMC4-227ENST00000497984 GLG1Q92896 1179 aa5.04□□□□□ -1.6
SMC4-227ENST00000497984 THAP7Q9BT49 309 aaPredicted RBP5.04□□□□□ -1.6
SMC4-227ENST00000497984 H7C1Q1 480 aa5.03□□□□□ -1.6
SMC4-227ENST00000497984 ERC2O15083 957 aa5.03□□□□□ -1.6
SMC4-227ENST00000497984 NPSP0C0P6 89 aa5.03□□□□□ -1.6
SMC4-227ENST00000497984 CDK11BP21127 795 aaKnown RBP5.03□□□□□ -1.6
SMC4-227ENST00000497984 MAP2K6P52564 334 aa5.03□□□□□ -1.6
SMC4-227ENST00000497984 LILRA4P59901 499 aa5.03□□□□□ -1.6
SMC4-227ENST00000497984 EXOSC9Q06265 439 aaKnown RBP5.03□□□□□ -1.6
SMC4-227ENST00000497984 RABEP1Q15276 862 aa5.03□□□□□ -1.6
SMC4-227ENST00000497984 PTPN21Q16825 1174 aa5.03□□□□□ -1.6
SMC4-227ENST00000497984 LONRF3Q496Y0 759 aa5.03□□□□□ -1.6
SMC4-227ENST00000497984 ARHGAP40Q5TG30 622 aa5.03□□□□□ -1.6
SMC4-227ENST00000497984 Q6ZWC4 215 aa5.03□□□□□ -1.6
SMC4-227ENST00000497984 MIER2Q8N344 545 aa5.03□□□□□ -1.6
SMC4-227ENST00000497984 HMCESQ96FZ2 354 aa5.03□□□□□ -1.6
SMC4-227ENST00000497984 PTDSS2Q9BVG9 487 aa5.03□□□□□ -1.6
SMC4-227ENST00000497984 SPC25Q9HBM1 224 aa5.03□□□□□ -1.6
SMC4-227ENST00000497984 LMBRD1Q9NUN5 540 aa5.03□□□□□ -1.6
SMC4-227ENST00000497984 PCDHA1Q9Y5I3 950 aa5.03□□□□□ -1.6
SMC4-227ENST00000497984 E5RJQ4 531 aa5.02□□□□□ -1.61
SMC4-227ENST00000497984 FTLP02792 175 aaPredicted RBP5.02□□□□□ -1.61
SMC4-227ENST00000497984 PXNP49023 591 aaPredicted RBP5.02□□□□□ -1.61
SMC4-227ENST00000497984 PDE1AP54750 535 aa5.02□□□□□ -1.61
SMC4-227ENST00000497984 TRIP6Q15654 476 aaKnown RBP5.02□□□□□ -1.61
SMC4-227ENST00000497984 Q4G0T1 1027 aa5.02□□□□□ -1.61
SMC4-227ENST00000497984 EMC10Q5UCC4 262 aa5.02□□□□□ -1.61
SMC4-227ENST00000497984 FCRL6Q6DN72 434 aa5.02□□□□□ -1.61
SMC4-227ENST00000497984 KIRREL2Q6UWL6 708 aa5.02□□□□□ -1.61
SMC4-227ENST00000497984 CNGA4Q8IV77 575 aa5.02□□□□□ -1.61
SMC4-227ENST00000497984 R3HDM4Q96D70 268 aa5.02□□□□□ -1.61
SMC4-227ENST00000497984 BRIP1Q9BX63 1249 aa5.02□□□□□ -1.61
SMC4-227ENST00000497984 GLOD4Q9HC38 313 aa5.02□□□□□ -1.61
SMC4-227ENST00000497984 WDR17Q8IZU2 1322 aa5.01□□□□□ -1.61
SMC4-227ENST00000497984 A1L4Q6 167 aa5.01□□□□□ -1.61
SMC4-227ENST00000497984 HDCP19113 662 aa5.01□□□□□ -1.61
SMC4-227ENST00000497984 IQCB1Q15051 598 aa5.01□□□□□ -1.61
SMC4-227ENST00000497984 ZNF260Q3ZCT1 412 aa5.01□□□□□ -1.61
SMC4-227ENST00000497984 KLHL22Q53GT1 634 aa5.01□□□□□ -1.61
SMC4-227ENST00000497984 RGS7BPQ6MZT1 257 aaPredicted RBP5.01□□□□□ -1.61
SMC4-227ENST00000497984 LAYNQ6UX15 382 aa5.01□□□□□ -1.61
SMC4-227ENST00000497984 USP45Q70EL2 814 aa5.01□□□□□ -1.61
SMC4-227ENST00000497984 DAZAP1Q96EP5 407 aaKnown RBP5.01□□□□□ -1.61
SMC4-227ENST00000497984 FAM167AQ96KS9 214 aa5.01□□□□□ -1.61
SMC4-227ENST00000497984 LENG8Q96PV6 779 aaPredicted RBP5.01□□□□□ -1.61
SMC4-227ENST00000497984 PNPOQ9NVS9 261 aa5.01□□□□□ -1.61
SMC4-227ENST00000497984 NDRG4Q9ULP0 352 aaKnown RBP5.01□□□□□ -1.61
SMC4-227ENST00000497984 GABRQQ9UN88 632 aa5.01□□□□□ -1.61
SMC4-227ENST00000497984 AFG3L2Q9Y4W6 797 aa5.01□□□□□ -1.61
SMC4-227ENST00000497984 POC1B-GALNT4F8VUJ3 575 aa5□□□□□ -1.61
SMC4-227ENST00000497984 INSIG1O15503 277 aa5□□□□□ -1.61
SMC4-227ENST00000497984 PDE8BO95263 885 aa5□□□□□ -1.61
SMC4-227ENST00000497984 CCKBRP32239 447 aa5□□□□□ -1.61
SMC4-227ENST00000497984 POLGP54098 1239 aaPredicted RBP5□□□□□ -1.61
SMC4-227ENST00000497984 PXDC1Q5TGL8 231 aa5□□□□□ -1.61
SMC4-227ENST00000497984 MIS18BP1Q6P0N0 1132 aa5□□□□□ -1.61
SMC4-227ENST00000497984 GALNT4Q8N4A0 578 aa5□□□□□ -1.61
SMC4-227ENST00000497984 KLHL13Q9P2N7 655 aa5□□□□□ -1.61
SMC4-227ENST00000497984 DTNBO60941 627 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms