RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 DPYSL4O14531 572 aa16.38■□□□□ 0.21
NUP50-219ENST00000497960 NR2F2P24468 414 aa16.38■□□□□ 0.21
NUP50-219ENST00000497960 GPR15P49685 360 aa16.38■□□□□ 0.21
NUP50-219ENST00000497960 PSMC1P62191 440 aaKnown RBP16.38■□□□□ 0.21
NUP50-219ENST00000497960 STIM1Q13586 685 aa16.38■□□□□ 0.21
NUP50-219ENST00000497960 NCOA4Q13772 614 aa16.38■□□□□ 0.21
NUP50-219ENST00000497960 NFKBIBQ15653 356 aa16.38■□□□□ 0.21
NUP50-219ENST00000497960 NFIL3Q16649 462 aa16.38■□□□□ 0.21
NUP50-219ENST00000497960 DDR2Q16832 855 aa16.38■□□□□ 0.21
NUP50-219ENST00000497960 STXBP5Q5T5C0 1151 aa16.38■□□□□ 0.21
NUP50-219ENST00000497960 TDRD10Q5VZ19 366 aaKnown RBP16.38■□□□□ 0.21
NUP50-219ENST00000497960 VITQ6UXI7 678 aa16.38■□□□□ 0.21
NUP50-219ENST00000497960 ARID3BQ8IVW6 561 aaPredicted RBP16.38■□□□□ 0.21
NUP50-219ENST00000497960 MFSD6LQ8IWD5 586 aa16.38■□□□□ 0.21
NUP50-219ENST00000497960 SCN4BQ8IWT1 228 aa16.38■□□□□ 0.21
NUP50-219ENST00000497960 YAF2Q8IY57 180 aa16.38■□□□□ 0.21
NUP50-219ENST00000497960 CCDC105Q8IYK2 499 aa16.38■□□□□ 0.21
NUP50-219ENST00000497960 IRF7Q92985 503 aa16.38■□□□□ 0.21
NUP50-219ENST00000497960 MRPL45Q9BRJ2 306 aaKnown RBP16.38■□□□□ 0.21
NUP50-219ENST00000497960 TASP1Q9H6P5 420 aa16.38■□□□□ 0.21
NUP50-219ENST00000497960 IL21Q9HBE4 155 aa16.38■□□□□ 0.21
NUP50-219ENST00000497960 MAGEC2Q9UBF1 373 aaPredicted RBP16.38■□□□□ 0.21
NUP50-219ENST00000497960 UXTQ9UBK9 157 aaPredicted RBP16.38■□□□□ 0.21
NUP50-219ENST00000497960 ZMYM5Q9UJ78 669 aa16.38■□□□□ 0.21
NUP50-219ENST00000497960 MAGED2Q9UNF1 606 aaPredicted RBP16.38■□□□□ 0.21
NUP50-219ENST00000497960 KANSL1LA0AUZ9 987 aa16.37■□□□□ 0.21
NUP50-219ENST00000497960 H0Y858 1186 aa16.37■□□□□ 0.21
NUP50-219ENST00000497960 IKBKBO14920 756 aa16.37■□□□□ 0.21
NUP50-219ENST00000497960 ZNF263O14978 683 aa16.37■□□□□ 0.21
NUP50-219ENST00000497960 MAPK13O15264 365 aa16.37■□□□□ 0.21
NUP50-219ENST00000497960 ATP2C2O75185 946 aa16.37■□□□□ 0.21
NUP50-219ENST00000497960 C4BPAP04003 597 aaKnown RBP16.37■□□□□ 0.21
NUP50-219ENST00000497960 KRT13P13646 458 aa16.37■□□□□ 0.21
NUP50-219ENST00000497960 GDI1P31150 447 aa16.37■□□□□ 0.21
NUP50-219ENST00000497960 MAGEA11P43364 429 aa16.37■□□□□ 0.21
NUP50-219ENST00000497960 CYP4F8P98187 520 aa16.37■□□□□ 0.21
NUP50-219ENST00000497960 MORC3Q14149 939 aa16.37■□□□□ 0.21
NUP50-219ENST00000497960 ZNF699Q32M78 642 aa16.37■□□□□ 0.21
NUP50-219ENST00000497960 ZNF667Q5HYK9 610 aa16.37■□□□□ 0.21
NUP50-219ENST00000497960 SDHAF4Q5VUM1 108 aa16.37■□□□□ 0.21
NUP50-219ENST00000497960 DTWD2Q8NBA8 298 aa16.37■□□□□ 0.21
NUP50-219ENST00000497960 ATOH1Q92858 354 aaPredicted RBP16.37■□□□□ 0.21
NUP50-219ENST00000497960 MYLPFQ96A32 169 aa16.37■□□□□ 0.21
NUP50-219ENST00000497960 FOXQ1Q9C009 403 aa16.37■□□□□ 0.21
NUP50-219ENST00000497960 XYLT2Q9H1B5 865 aa16.37■□□□□ 0.21
NUP50-219ENST00000497960 VRTNQ9H8Y1 702 aa16.37■□□□□ 0.21
NUP50-219ENST00000497960 TMEM63CQ9P1W3 806 aa16.37■□□□□ 0.21
NUP50-219ENST00000497960 A8MXQ7 604 aa16.36■□□□□ 0.21
NUP50-219ENST00000497960 P4HA1P13674 534 aa16.36■□□□□ 0.21
NUP50-219ENST00000497960 HMGA1P17096 107 aaKnown RBP16.36■□□□□ 0.21
NUP50-219ENST00000497960 WEE1P30291 646 aa16.36■□□□□ 0.21
NUP50-219ENST00000497960 PSMC2P35998 433 aaKnown RBP16.36■□□□□ 0.21
NUP50-219ENST00000497960 PPP1R2P41236 205 aa16.36■□□□□ 0.21
NUP50-219ENST00000497960 VAMP7P51809 220 aa16.36■□□□□ 0.21
NUP50-219ENST00000497960 NLRP12P59046 1061 aa16.36■□□□□ 0.21
NUP50-219ENST00000497960 DLG4P78352 724 aa16.36■□□□□ 0.21
NUP50-219ENST00000497960 CYP27A1Q02318 531 aa16.36■□□□□ 0.21
NUP50-219ENST00000497960 ADAM9Q13443 819 aa16.36■□□□□ 0.21
NUP50-219ENST00000497960 UBXN2BQ14CS0 331 aa16.36■□□□□ 0.21
NUP50-219ENST00000497960 CCDC142Q17RM4 750 aa16.36■□□□□ 0.21
NUP50-219ENST00000497960 SKOR2Q2VWA4 1001 aaPredicted RBP16.36■□□□□ 0.21
NUP50-219ENST00000497960 ZACNQ401N2 412 aa16.36■□□□□ 0.21
NUP50-219ENST00000497960 VSTM1Q6UX27 236 aa16.36■□□□□ 0.21
NUP50-219ENST00000497960 TPRG1Q6ZUI0 275 aa16.36■□□□□ 0.21
NUP50-219ENST00000497960 INTS8Q75QN2 995 aaKnown RBP16.36■□□□□ 0.21
NUP50-219ENST00000497960 FAM186BQ8IYM0 893 aa16.36■□□□□ 0.21
NUP50-219ENST00000497960 PJA1Q8NG27 643 aa16.36■□□□□ 0.21
NUP50-219ENST00000497960 MYCBPAPQ8TBZ2 947 aa16.36■□□□□ 0.21
NUP50-219ENST00000497960 MRPS31Q92665 395 aaKnown RBP16.36■□□□□ 0.21
NUP50-219ENST00000497960 MKNK1Q9BUB5 465 aa16.36■□□□□ 0.21
NUP50-219ENST00000497960 DDX23Q9BUQ8 820 aaKnown RBP16.36■□□□□ 0.21
NUP50-219ENST00000497960 CRTAC1Q9NQ79 661 aa16.36■□□□□ 0.21
NUP50-219ENST00000497960 HEBP1Q9NRV9 189 aa16.36■□□□□ 0.21
NUP50-219ENST00000497960 OBP2AQ9NY56 170 aa16.36■□□□□ 0.21
NUP50-219ENST00000497960 MRPS17Q9Y2R5 130 aaKnown RBP16.36■□□□□ 0.21
NUP50-219ENST00000497960 SLC38A8A6NNN8 435 aa16.35■□□□□ 0.21
NUP50-219ENST00000497960 PSMA7O14818 248 aa16.35■□□□□ 0.21
NUP50-219ENST00000497960 AKAP3O75969 853 aa16.35■□□□□ 0.21
NUP50-219ENST00000497960 NOL4O94818 638 aa16.35■□□□□ 0.21
NUP50-219ENST00000497960 F11P03951 625 aa16.35■□□□□ 0.21
NUP50-219ENST00000497960 DCNP07585 359 aaKnown RBP16.35■□□□□ 0.21
NUP50-219ENST00000497960 BDNFP23560 247 aa16.35■□□□□ 0.21
NUP50-219ENST00000497960 DDX6P26196 483 aaKnown RBP eCLIP16.35■□□□□ 0.21
NUP50-219ENST00000497960 ANXA13P27216 316 aa16.35■□□□□ 0.21
NUP50-219ENST00000497960 GRIK1P39086 918 aa16.35■□□□□ 0.21
NUP50-219ENST00000497960 PRCPP42785 496 aa16.35■□□□□ 0.21
NUP50-219ENST00000497960 SGSM1Q2NKQ1 1148 aa16.35■□□□□ 0.21
NUP50-219ENST00000497960 EDRF1Q3B7T1 1238 aa16.35■□□□□ 0.21
NUP50-219ENST00000497960 COBLL1Q53SF7 1204 aa16.35■□□□□ 0.21
NUP50-219ENST00000497960 MDH1BQ5I0G3 518 aa16.35■□□□□ 0.21
NUP50-219ENST00000497960 KLHL10Q6JEL2 608 aa16.35■□□□□ 0.21
NUP50-219ENST00000497960 ZNF852Q6ZMS4 543 aa16.35■□□□□ 0.21
NUP50-219ENST00000497960 SV2AQ7L0J3 742 aa16.35■□□□□ 0.21
NUP50-219ENST00000497960 GPIHBP1Q8IV16 184 aa16.35■□□□□ 0.21
NUP50-219ENST00000497960 STKLD1Q8NE28 680 aa16.35■□□□□ 0.21
NUP50-219ENST00000497960 TAF4BQ92750 862 aa16.35■□□□□ 0.21
NUP50-219ENST00000497960 PCED1BQ96HM7 432 aa16.35■□□□□ 0.21
NUP50-219ENST00000497960 NELL2Q99435 816 aa16.35■□□□□ 0.21
NUP50-219ENST00000497960 OSBPL6Q9BZF3 934 aa16.35■□□□□ 0.21
NUP50-219ENST00000497960 TRPV5Q9NQA5 729 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms