RNA–Protein interactions for RNA: ENST00000497755.1

CLIC4-204, Transcript of chloride intracellular channel 4, humanhuman

TSL 3

Gene CLIC4, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-204ENST00000497755 RPLP0P6Q8NHW5 317 aa23.4■■□□□ 1.34
CLIC4-204ENST00000497755 LEO1Q8WVC0 666 aaPredicted RBP23.4■■□□□ 1.34
CLIC4-204ENST00000497755 MYRFLQ96LU7 910 aa23.4■■□□□ 1.34
CLIC4-204ENST00000497755 ZNF560Q96MR9 790 aa23.4■■□□□ 1.34
CLIC4-204ENST00000497755 SLC22A12Q96S37 553 aa23.4■■□□□ 1.34
CLIC4-204ENST00000497755 PKMYT1Q99640 499 aa23.4■■□□□ 1.34
CLIC4-204ENST00000497755 STRA6Q9BX79 667 aa23.4■■□□□ 1.34
CLIC4-204ENST00000497755 L1RE1Q9UN81 338 aa23.4■■□□□ 1.34
CLIC4-204ENST00000497755 AGAP1Q9UPQ3 857 aa23.4■■□□□ 1.34
CLIC4-204ENST00000497755 DCLK1O15075 740 aa23.39■■□□□ 1.33
CLIC4-204ENST00000497755 ACAT1P24752 427 aaKnown RBP23.39■■□□□ 1.33
CLIC4-204ENST00000497755 POLR2BP30876 1174 aaKnown RBP23.39■■□□□ 1.33
CLIC4-204ENST00000497755 RPL10AP62906 217 aaKnown RBP23.39■■□□□ 1.33
CLIC4-204ENST00000497755 FAM160A1Q05DH4 1040 aa23.39■■□□□ 1.33
CLIC4-204ENST00000497755 KCNA1Q09470 495 aa23.39■■□□□ 1.33
CLIC4-204ENST00000497755 MTF1Q14872 753 aa23.39■■□□□ 1.33
CLIC4-204ENST00000497755 ERICH6BQ5W0A0 696 aa23.39■■□□□ 1.33
CLIC4-204ENST00000497755 SFR1Q86XK3 245 aa23.39■■□□□ 1.33
CLIC4-204ENST00000497755 CPA6Q8N4T0 437 aa23.39■■□□□ 1.33
CLIC4-204ENST00000497755 C1orf127Q8N9H9 656 aa23.39■■□□□ 1.33
CLIC4-204ENST00000497755 CXorf38Q8TB03 319 aa23.39■■□□□ 1.33
CLIC4-204ENST00000497755 OSCP1Q8WVF1 389 aa23.39■■□□□ 1.33
CLIC4-204ENST00000497755 TRMT2BQ96GJ1 504 aaKnown RBP23.39■■□□□ 1.33
CLIC4-204ENST00000497755 FAM213AQ9BRX8 229 aa23.39■■□□□ 1.33
CLIC4-204ENST00000497755 ABCB6Q9NP58 842 aa23.39■■□□□ 1.33
CLIC4-204ENST00000497755 DUS2Q9NX74 493 aaKnown RBP23.39■■□□□ 1.33
CLIC4-204ENST00000497755 DDX43Q9NXZ2 648 aaKnown RBP23.39■■□□□ 1.33
CLIC4-204ENST00000497755 EBF1Q9UH73 591 aa23.39■■□□□ 1.33
CLIC4-204ENST00000497755 GTF3C4Q9UKN8 822 aa23.39■■□□□ 1.33
CLIC4-204ENST00000497755 KCNK5O95279 499 aa23.38■■□□□ 1.33
CLIC4-204ENST00000497755 ITGB3P05106 788 aa23.38■■□□□ 1.33
CLIC4-204ENST00000497755 TFAMQ00059 246 aaKnown RBP23.38■■□□□ 1.33
CLIC4-204ENST00000497755 RABEP1Q15276 862 aa23.38■■□□□ 1.33
CLIC4-204ENST00000497755 ZNF77Q15935 545 aa23.38■■□□□ 1.33
CLIC4-204ENST00000497755 INTS6LQ5JSJ4 861 aaKnown RBP23.38■■□□□ 1.33
CLIC4-204ENST00000497755 TCEAL6Q6IPX3 200 aa23.38■■□□□ 1.33
CLIC4-204ENST00000497755 DYMQ7RTS9 669 aa23.38■■□□□ 1.33
CLIC4-204ENST00000497755 TCEAL3Q969E4 200 aa23.38■■□□□ 1.33
CLIC4-204ENST00000497755 HVCN1Q96D96 273 aa23.38■■□□□ 1.33
CLIC4-204ENST00000497755 UXTQ9UBK9 157 aaPredicted RBP23.38■■□□□ 1.33
CLIC4-204ENST00000497755 ANAPC1Q9H1A4 1944 aa23.37■■□□□ 1.33
CLIC4-204ENST00000497755 HUS1O60921 280 aa23.37■■□□□ 1.33
CLIC4-204ENST00000497755 APBB3O95704 486 aa23.37■■□□□ 1.33
CLIC4-204ENST00000497755 BMP15O95972 392 aa23.37■■□□□ 1.33
CLIC4-204ENST00000497755 DMC1Q14565 340 aa23.37■■□□□ 1.33
CLIC4-204ENST00000497755 CCDC142Q17RM4 750 aa23.37■■□□□ 1.33
CLIC4-204ENST00000497755 EML3Q32P44 896 aa23.37■■□□□ 1.33
CLIC4-204ENST00000497755 RNF43Q68DV7 783 aa23.37■■□□□ 1.33
CLIC4-204ENST00000497755 USP49Q70CQ1 688 aa23.37■■□□□ 1.33
CLIC4-204ENST00000497755 OSTM1Q86WC4 334 aa23.37■■□□□ 1.33
CLIC4-204ENST00000497755 CD101Q93033 1021 aa23.37■■□□□ 1.33
CLIC4-204ENST00000497755 EXOC4Q96A65 974 aa23.37■■□□□ 1.33
CLIC4-204ENST00000497755 EPSTI1Q96J88 318 aa23.37■■□□□ 1.33
CLIC4-204ENST00000497755 TMEM206Q9H813 350 aa23.37■■□□□ 1.33
CLIC4-204ENST00000497755 TRPC7Q9HCX4 862 aa23.37■■□□□ 1.33
CLIC4-204ENST00000497755 GCNT4Q9P109 453 aa23.37■■□□□ 1.33
CLIC4-204ENST00000497755 WNT6Q9Y6F9 365 aa23.37■■□□□ 1.33
CLIC4-204ENST00000497755 TRAV19A0A0A6YYK7 116 aa23.36■■□□□ 1.33
CLIC4-204ENST00000497755 TULP1O00294 542 aaPredicted RBP23.36■■□□□ 1.33
CLIC4-204ENST00000497755 RHOBTB1O94844 696 aa23.36■■□□□ 1.33
CLIC4-204ENST00000497755 CD2BP2O95400 341 aaKnown RBP23.36■■□□□ 1.33
CLIC4-204ENST00000497755 USP17L7P0C7H9 530 aa23.36■■□□□ 1.33
CLIC4-204ENST00000497755 SF3A1Q15459 793 aaKnown RBP23.36■■□□□ 1.33
CLIC4-204ENST00000497755 C8orf34Q49A92 452 aa23.36■■□□□ 1.33
CLIC4-204ENST00000497755 TMEM86AQ8N2M4 240 aa23.36■■□□□ 1.33
CLIC4-204ENST00000497755 TTC16Q8NEE8 873 aa23.36■■□□□ 1.33
CLIC4-204ENST00000497755 CACTINQ8WUQ7 758 aaKnown RBP23.36■■□□□ 1.33
CLIC4-204ENST00000497755 SAAL1Q96ER3 474 aa23.36■■□□□ 1.33
CLIC4-204ENST00000497755 FAM84AQ96KN4 292 aa23.36■■□□□ 1.33
CLIC4-204ENST00000497755 LINC00597Q9H2U6 94 aa23.36■■□□□ 1.33
CLIC4-204ENST00000497755 MYO16Q9Y6X6 1858 aa23.36■■□□□ 1.33
CLIC4-204ENST00000497755 BCLAF3A2AJT9 711 aaKnown RBP23.35■■□□□ 1.33
CLIC4-204ENST00000497755 HCRTO43612 131 aa23.35■■□□□ 1.33
CLIC4-204ENST00000497755 IFNAR2P48551 515 aa23.35■■□□□ 1.33
CLIC4-204ENST00000497755 MYL7Q01449 175 aa23.35■■□□□ 1.33
CLIC4-204ENST00000497755 CREB5Q02930 508 aa23.35■■□□□ 1.33
CLIC4-204ENST00000497755 USP4Q13107 963 aa23.35■■□□□ 1.33
CLIC4-204ENST00000497755 ELF2Q15723 593 aa23.35■■□□□ 1.33
CLIC4-204ENST00000497755 CFAP221Q4G0U5 840 aa23.35■■□□□ 1.33
CLIC4-204ENST00000497755 LARP1BQ659C4 914 aaKnown RBP23.35■■□□□ 1.33
CLIC4-204ENST00000497755 BRSK2Q8IWQ3 736 aa23.35■■□□□ 1.33
CLIC4-204ENST00000497755 CSGALNACT2Q8N6G5 542 aa23.35■■□□□ 1.33
CLIC4-204ENST00000497755 LRRC52Q8N7C0 313 aa23.35■■□□□ 1.33
CLIC4-204ENST00000497755 ARL14EPQ8N8R7 260 aaPredicted RBP23.35■■□□□ 1.33
CLIC4-204ENST00000497755 ATP2A3Q93084 1043 aa23.35■■□□□ 1.33
CLIC4-204ENST00000497755 MRPL44Q9H9J2 332 aaKnown RBP23.35■■□□□ 1.33
CLIC4-204ENST00000497755 GDAP2Q9NXN4 497 aa23.35■■□□□ 1.33
CLIC4-204ENST00000497755 TBC1D7Q9P0N9 293 aa23.35■■□□□ 1.33
CLIC4-204ENST00000497755 NUP205Q92621 2012 aa23.35■■□□□ 1.33
CLIC4-204ENST00000497755 C2orf78A6NCI8 922 aa23.34■■□□□ 1.33
CLIC4-204ENST00000497755 MYMKA6NI61 221 aa23.34■■□□□ 1.33
CLIC4-204ENST00000497755 GABRDO14764 452 aa23.34■■□□□ 1.33
CLIC4-204ENST00000497755 CAVIN2O95810 425 aa23.34■■□□□ 1.33
CLIC4-204ENST00000497755 CKMP06732 381 aa23.34■■□□□ 1.33
CLIC4-204ENST00000497755 PSMD2Q13200 908 aa23.34■■□□□ 1.33
CLIC4-204ENST00000497755 L1TD1Q5T7N2 865 aaKnown RBP23.34■■□□□ 1.33
CLIC4-204ENST00000497755 SH3RF2Q8TEC5 729 aa23.34■■□□□ 1.33
CLIC4-204ENST00000497755 ACDQ96AP0 544 aa23.34■■□□□ 1.33
CLIC4-204ENST00000497755 DNAJC19Q96DA6 116 aa23.34■■□□□ 1.33
CLIC4-204ENST00000497755 ACCSQ96QU6 501 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms