RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 CCDC92Q53HC0 331 aaPredicted RBP13.67□□□□□ -0.22
GAPVD1-220ENST00000497580 SPDYAQ5MJ70 313 aa13.67□□□□□ -0.22
GAPVD1-220ENST00000497580 DCAF8Q5TAQ9 597 aa13.67□□□□□ -0.22
GAPVD1-220ENST00000497580 ANKS1BQ7Z6G8 1248 aa13.67□□□□□ -0.22
GAPVD1-220ENST00000497580 FBXO33Q7Z6M2 555 aa13.67□□□□□ -0.22
GAPVD1-220ENST00000497580 OGFOD1Q8N543 542 aa13.67□□□□□ -0.22
GAPVD1-220ENST00000497580 PRICKLE1Q96MT3 831 aaPredicted RBP13.67□□□□□ -0.22
GAPVD1-220ENST00000497580 EBF4Q9BQW3 602 aa13.67□□□□□ -0.22
GAPVD1-220ENST00000497580 APOL6Q9BWW8 343 aa13.67□□□□□ -0.22
GAPVD1-220ENST00000497580 VPS11Q9H270 941 aa13.67□□□□□ -0.22
GAPVD1-220ENST00000497580 NDUFA13Q9P0J0 144 aa13.67□□□□□ -0.22
GAPVD1-220ENST00000497580 DOCK2Q92608 1830 aa13.67□□□□□ -0.22
GAPVD1-220ENST00000497580 PROCP04070 461 aa13.67□□□□□ -0.22
GAPVD1-220ENST00000497580 RPA1P27694 616 aa13.67□□□□□ -0.22
GAPVD1-220ENST00000497580 HOXA13P31271 388 aaPredicted RBP13.67□□□□□ -0.22
GAPVD1-220ENST00000497580 CACNB3P54284 484 aa13.67□□□□□ -0.22
GAPVD1-220ENST00000497580 YWHAGP61981 247 aaKnown RBP eCLIP13.67□□□□□ -0.22
GAPVD1-220ENST00000497580 IGBP1P78318 339 aa13.67□□□□□ -0.22
GAPVD1-220ENST00000497580 ARHGAP4P98171 946 aa13.67□□□□□ -0.22
GAPVD1-220ENST00000497580 CHI3L2Q15782 390 aa13.67□□□□□ -0.22
GAPVD1-220ENST00000497580 RSPH3Q86UC2 560 aa13.67□□□□□ -0.22
GAPVD1-220ENST00000497580 SLFN12Q8IYM2 578 aa13.67□□□□□ -0.22
GAPVD1-220ENST00000497580 ABHD8Q96I13 439 aa13.67□□□□□ -0.22
GAPVD1-220ENST00000497580 EIF2AK1Q9BQI3 630 aaKnown RBP13.67□□□□□ -0.22
GAPVD1-220ENST00000497580 SAE1Q9UBE0 346 aaPredicted RBP13.67□□□□□ -0.22
GAPVD1-220ENST00000497580 EML1O00423 815 aa13.67□□□□□ -0.22
GAPVD1-220ENST00000497580 CYB561D2O14569 222 aa13.67□□□□□ -0.22
GAPVD1-220ENST00000497580 XPOTO43592 962 aaKnown RBP13.67□□□□□ -0.22
GAPVD1-220ENST00000497580 CYP1A2P05177 515 aa13.67□□□□□ -0.22
GAPVD1-220ENST00000497580 INHBAP08476 426 aa13.67□□□□□ -0.22
GAPVD1-220ENST00000497580 GTF2H1P32780 548 aa13.67□□□□□ -0.22
GAPVD1-220ENST00000497580 PHBP35232 272 aa13.67□□□□□ -0.22
GAPVD1-220ENST00000497580 GPX6P59796 221 aa13.67□□□□□ -0.22
GAPVD1-220ENST00000497580 PTK7Q13308 1070 aa13.67□□□□□ -0.22
GAPVD1-220ENST00000497580 CCNG2Q16589 344 aa13.67□□□□□ -0.22
GAPVD1-220ENST00000497580 AMIGO2Q86SJ2 522 aa13.67□□□□□ -0.22
GAPVD1-220ENST00000497580 FBXO36Q8NEA4 188 aa13.67□□□□□ -0.22
GAPVD1-220ENST00000497580 CSRNP1Q96S65 589 aa13.67□□□□□ -0.22
GAPVD1-220ENST00000497580 CBWD1Q9BRT8 395 aa13.67□□□□□ -0.22
GAPVD1-220ENST00000497580 ROBO3Q96MS0 1386 aa13.67□□□□□ -0.22
GAPVD1-220ENST00000497580 COL5A2P05997 1499 aaPredicted RBP13.67□□□□□ -0.22
GAPVD1-220ENST00000497580 ARHGAP10A1A4S6 786 aa13.66□□□□□ -0.22
GAPVD1-220ENST00000497580 COPEO14579 308 aa13.66□□□□□ -0.22
GAPVD1-220ENST00000497580 TRMUO75648 421 aaKnown RBP13.66□□□□□ -0.22
GAPVD1-220ENST00000497580 UFL1O94874 794 aa13.66□□□□□ -0.22
GAPVD1-220ENST00000497580 SMIM18P0DKX4 95 aa13.66□□□□□ -0.22
GAPVD1-220ENST00000497580 STT3AP46977 705 aa13.66□□□□□ -0.22
GAPVD1-220ENST00000497580 LMNB2Q03252 620 aa13.66□□□□□ -0.22
GAPVD1-220ENST00000497580 BST1Q10588 318 aa13.66□□□□□ -0.22
GAPVD1-220ENST00000497580 LPIN1Q14693 890 aa13.66□□□□□ -0.22
GAPVD1-220ENST00000497580 MAP7D1Q3KQU3 841 aa13.66□□□□□ -0.22
GAPVD1-220ENST00000497580 MFSD14BQ5SR56 506 aa13.66□□□□□ -0.22
GAPVD1-220ENST00000497580 HPS6Q86YV9 775 aa13.66□□□□□ -0.22
GAPVD1-220ENST00000497580 KREMEN1Q96MU8 473 aa13.66□□□□□ -0.22
GAPVD1-220ENST00000497580 WWP1Q9H0M0 922 aa13.66□□□□□ -0.22
GAPVD1-220ENST00000497580 IFT122Q9HBG6 1241 aa13.66□□□□□ -0.22
GAPVD1-220ENST00000497580 NOCTQ9UK39 431 aaKnown RBP13.66□□□□□ -0.22
GAPVD1-220ENST00000497580 H0YIN7 160 aa13.66□□□□□ -0.22
GAPVD1-220ENST00000497580 SRGAP2CP0DJJ0 459 aa13.66□□□□□ -0.22
GAPVD1-220ENST00000497580 SRGAP2BP0DMP2 458 aa13.66□□□□□ -0.22
GAPVD1-220ENST00000497580 CIITAP33076 1130 aa13.66□□□□□ -0.22
GAPVD1-220ENST00000497580 MSX2P35548 267 aaPredicted RBP13.66□□□□□ -0.22
GAPVD1-220ENST00000497580 SLC1A1P43005 524 aa13.66□□□□□ -0.22
GAPVD1-220ENST00000497580 CENPCQ03188 943 aa13.66□□□□□ -0.22
GAPVD1-220ENST00000497580 FAAP100Q0VG06 881 aa13.66□□□□□ -0.22
GAPVD1-220ENST00000497580 ITGA9Q13797 1035 aa13.66□□□□□ -0.22
GAPVD1-220ENST00000497580 PDK1Q15118 436 aa13.66□□□□□ -0.22
GAPVD1-220ENST00000497580 OLFML1Q6UWY5 402 aa13.66□□□□□ -0.22
GAPVD1-220ENST00000497580 ANO5Q75V66 913 aa13.66□□□□□ -0.22
GAPVD1-220ENST00000497580 TMC7Q7Z402 723 aa13.66□□□□□ -0.22
GAPVD1-220ENST00000497580 TRIM50Q86XT4 487 aa13.66□□□□□ -0.22
GAPVD1-220ENST00000497580 SERAC1Q96JX3 654 aa13.66□□□□□ -0.22
GAPVD1-220ENST00000497580 DCUN1D5Q9BTE7 237 aa13.66□□□□□ -0.22
GAPVD1-220ENST00000497580 PI4K2AQ9BTU6 479 aa13.66□□□□□ -0.22
GAPVD1-220ENST00000497580 SLC24A2Q9UI40 661 aa13.66□□□□□ -0.22
GAPVD1-220ENST00000497580 SOX13Q9UN79 622 aa13.66□□□□□ -0.22
GAPVD1-220ENST00000497580 TOM1L1O75674 476 aa13.66□□□□□ -0.22
GAPVD1-220ENST00000497580 KRT1P04264 644 aa13.66□□□□□ -0.22
GAPVD1-220ENST00000497580 AKR1B1P15121 316 aa13.66□□□□□ -0.22
GAPVD1-220ENST00000497580 MTTPP55157 894 aa13.66□□□□□ -0.22
GAPVD1-220ENST00000497580 PRKD1Q15139 912 aaPredicted RBP13.66□□□□□ -0.22
GAPVD1-220ENST00000497580 UGT2A3Q6UWM9 527 aa13.66□□□□□ -0.22
GAPVD1-220ENST00000497580 PATL1Q86TB9 770 aaKnown RBP13.66□□□□□ -0.22
GAPVD1-220ENST00000497580 BANPQ8N9N5 519 aa13.66□□□□□ -0.22
GAPVD1-220ENST00000497580 TUT1Q9H6E5 874 aaKnown RBP13.66□□□□□ -0.22
GAPVD1-220ENST00000497580 CACNA1SQ13698 1873 aa13.66□□□□□ -0.22
GAPVD1-220ENST00000497580 TM9SF1O15321 606 aa13.65□□□□□ -0.22
GAPVD1-220ENST00000497580 FAM155BO75949 473 aa13.65□□□□□ -0.22
GAPVD1-220ENST00000497580 PDGFRBP09619 1106 aa13.65□□□□□ -0.22
GAPVD1-220ENST00000497580 GZMAP12544 262 aa13.65□□□□□ -0.22
GAPVD1-220ENST00000497580 SLC5A2P31639 672 aa13.65□□□□□ -0.22
GAPVD1-220ENST00000497580 PPP6R3Q5H9R7 873 aaPredicted RBP13.65□□□□□ -0.22
GAPVD1-220ENST00000497580 MAP3K21Q5TCX8 1036 aa13.65□□□□□ -0.22
GAPVD1-220ENST00000497580 TDRPQ86YL5 185 aa13.65□□□□□ -0.22
GAPVD1-220ENST00000497580 TRIML2Q8N7C3 387 aa13.65□□□□□ -0.22
GAPVD1-220ENST00000497580 ATP11CQ8NB49 1132 aa13.65□□□□□ -0.22
GAPVD1-220ENST00000497580 GIPC3Q8TF64 312 aa13.65□□□□□ -0.22
GAPVD1-220ENST00000497580 LTBP4Q8N2S1 1624 aa13.65□□□□□ -0.22
GAPVD1-220ENST00000497580 DDX39AO00148 427 aaKnown RBP13.65□□□□□ -0.22
GAPVD1-220ENST00000497580 STRNO43815 780 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms