RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 ITGB3P05106 788 aa18.08■□□□□ 0.48
TRAPPC3-207ENST00000497251 FAM163BP0C2L3 166 aa18.08■□□□□ 0.48
TRAPPC3-207ENST00000497251 USP17L7P0C7H9 530 aa18.08■□□□□ 0.48
TRAPPC3-207ENST00000497251 ZNF806P0C7X5 589 aa18.08■□□□□ 0.48
TRAPPC3-207ENST00000497251 TCF3P15923 654 aa18.08■□□□□ 0.48
TRAPPC3-207ENST00000497251 DMWDQ09019 674 aa18.08■□□□□ 0.48
TRAPPC3-207ENST00000497251 TXNDC8Q6A555 127 aa18.08■□□□□ 0.48
TRAPPC3-207ENST00000497251 VSTM1Q6UX27 236 aa18.08■□□□□ 0.48
TRAPPC3-207ENST00000497251 C4orf50Q6ZRC1 276 aa18.08■□□□□ 0.48
TRAPPC3-207ENST00000497251 TTC8Q8TAM2 541 aa18.08■□□□□ 0.48
TRAPPC3-207ENST00000497251 ATP2A3Q93084 1043 aa18.08■□□□□ 0.48
TRAPPC3-207ENST00000497251 ZC3H10Q96K80 434 aaKnown RBP18.08■□□□□ 0.48
TRAPPC3-207ENST00000497251 PI4K2AQ9BTU6 479 aa18.08■□□□□ 0.48
TRAPPC3-207ENST00000497251 KIAA1586Q9HCI6 787 aa18.08■□□□□ 0.48
TRAPPC3-207ENST00000497251 L1RE1Q9UN81 338 aa18.08■□□□□ 0.48
TRAPPC3-207ENST00000497251 CHD8Q9HCK8 2581 aa18.08■□□□□ 0.48
TRAPPC3-207ENST00000497251 TCHHQ07283 1943 aa18.08■□□□□ 0.48
TRAPPC3-207ENST00000497251 DENND4CQ5VZ89 1909 aa18.08■□□□□ 0.48
TRAPPC3-207ENST00000497251 TRAV19A0A0A6YYK7 116 aa18.07■□□□□ 0.48
TRAPPC3-207ENST00000497251 VPS37CA5D8V6 355 aaPredicted RBP18.07■□□□□ 0.48
TRAPPC3-207ENST00000497251 RAP1GAPP47736 663 aa18.07■□□□□ 0.48
TRAPPC3-207ENST00000497251 PPP3CCP48454 512 aa18.07■□□□□ 0.48
TRAPPC3-207ENST00000497251 FSTL4Q6MZW2 842 aa18.07■□□□□ 0.48
TRAPPC3-207ENST00000497251 C11orf74Q86VG3 221 aa18.07■□□□□ 0.48
TRAPPC3-207ENST00000497251 SPATA2LQ8IUW3 424 aaPredicted RBP18.07■□□□□ 0.48
TRAPPC3-207ENST00000497251 CXorf38Q8TB03 319 aa18.07■□□□□ 0.48
TRAPPC3-207ENST00000497251 OSCP1Q8WVF1 389 aa18.07■□□□□ 0.48
TRAPPC3-207ENST00000497251 ACDQ96AP0 544 aa18.07■□□□□ 0.48
TRAPPC3-207ENST00000497251 ANKRD36BP1Q96IX9 119 aa18.07■□□□□ 0.48
TRAPPC3-207ENST00000497251 PKMYT1Q99640 499 aa18.07■□□□□ 0.48
TRAPPC3-207ENST00000497251 P2RY13Q9BPV8 354 aa18.07■□□□□ 0.48
TRAPPC3-207ENST00000497251 EBF3Q9H4W6 596 aa18.07■□□□□ 0.48
TRAPPC3-207ENST00000497251 TMLHEQ9NVH6 421 aa18.07■□□□□ 0.48
TRAPPC3-207ENST00000497251 MAGED2Q9UNF1 606 aaPredicted RBP18.07■□□□□ 0.48
TRAPPC3-207ENST00000497251 CCL26Q9Y258 94 aa18.07■□□□□ 0.48
TRAPPC3-207ENST00000497251 CLIC4Q9Y696 253 aa18.07■□□□□ 0.48
TRAPPC3-207ENST00000497251 ZNF638Q14966 1978 aaKnown RBP18.07■□□□□ 0.48
TRAPPC3-207ENST00000497251 KIF26AQ9ULI4 1882 aaPredicted RBP18.06■□□□□ 0.48
TRAPPC3-207ENST00000497251 TMEM191BP0C7N4 346 aa18.06■□□□□ 0.48
TRAPPC3-207ENST00000497251 STAT6P42226 847 aa18.06■□□□□ 0.48
TRAPPC3-207ENST00000497251 KCNA1Q09470 495 aa18.06■□□□□ 0.48
TRAPPC3-207ENST00000497251 MTF1Q14872 753 aa18.06■□□□□ 0.48
TRAPPC3-207ENST00000497251 DUOXA2Q1HG44 320 aa18.06■□□□□ 0.48
TRAPPC3-207ENST00000497251 IL31Q6EBC2 164 aa18.06■□□□□ 0.48
TRAPPC3-207ENST00000497251 FAM171BQ6P995 826 aa18.06■□□□□ 0.48
TRAPPC3-207ENST00000497251 USP49Q70CQ1 688 aa18.06■□□□□ 0.48
TRAPPC3-207ENST00000497251 SYT13Q7L8C5 426 aa18.06■□□□□ 0.48
TRAPPC3-207ENST00000497251 LIMS2Q7Z4I7 341 aa18.06■□□□□ 0.48
TRAPPC3-207ENST00000497251 CCDC65Q8IXS2 484 aa18.06■□□□□ 0.48
TRAPPC3-207ENST00000497251 GPD1LQ8N335 351 aa18.06■□□□□ 0.48
TRAPPC3-207ENST00000497251 C12orf50Q8NA57 414 aaPredicted RBP18.06■□□□□ 0.48
TRAPPC3-207ENST00000497251 SPATA17Q96L03 361 aa18.06■□□□□ 0.48
TRAPPC3-207ENST00000497251 SMG9Q9H0W8 520 aaKnown RBP18.06■□□□□ 0.48
TRAPPC3-207ENST00000497251 ECT2Q9H8V3 914 aa18.06■□□□□ 0.48
TRAPPC3-207ENST00000497251 PANK4Q9NVE7 773 aa18.06■□□□□ 0.48
TRAPPC3-207ENST00000497251 EBF1Q9UH73 591 aa18.06■□□□□ 0.48
TRAPPC3-207ENST00000497251 CDH9Q9ULB4 789 aa18.06■□□□□ 0.48
TRAPPC3-207ENST00000497251 SNX9Q9Y5X1 595 aa18.06■□□□□ 0.48
TRAPPC3-207ENST00000497251 ZNF233A6NK53 670 aa18.05■□□□□ 0.48
TRAPPC3-207ENST00000497251 EPN2O95208 641 aa18.05■□□□□ 0.48
TRAPPC3-207ENST00000497251 CCDC192P0DO97 292 aa18.05■□□□□ 0.48
TRAPPC3-207ENST00000497251 IDEP14735 1019 aa18.05■□□□□ 0.48
TRAPPC3-207ENST00000497251 CYP2F1P24903 491 aa18.05■□□□□ 0.48
TRAPPC3-207ENST00000497251 GJA4P35212 333 aa18.05■□□□□ 0.48
TRAPPC3-207ENST00000497251 GALK1P51570 392 aa18.05■□□□□ 0.48
TRAPPC3-207ENST00000497251 SNRPFP62306 86 aaKnown RBP18.05■□□□□ 0.48
TRAPPC3-207ENST00000497251 SRSF5Q13243 272 aaKnown RBP18.05■□□□□ 0.48
TRAPPC3-207ENST00000497251 SLC39A14Q15043 492 aa18.05■□□□□ 0.48
TRAPPC3-207ENST00000497251 DDR2Q16832 855 aa18.05■□□□□ 0.48
TRAPPC3-207ENST00000497251 PPM1JQ5JR12 505 aa18.05■□□□□ 0.48
TRAPPC3-207ENST00000497251 ADGRF2Q8IZF7 708 aa18.05■□□□□ 0.48
TRAPPC3-207ENST00000497251 SAAL1Q96ER3 474 aa18.05■□□□□ 0.48
TRAPPC3-207ENST00000497251 INTS4Q96HW7 963 aaKnown RBP18.05■□□□□ 0.48
TRAPPC3-207ENST00000497251 CNTNAP3BQ96NU0 1288 aa18.05■□□□□ 0.48
TRAPPC3-207ENST00000497251 CNTNAP3Q9BZ76 1288 aa18.05■□□□□ 0.48
TRAPPC3-207ENST00000497251 CUEDC2Q9H467 287 aa18.05■□□□□ 0.48
TRAPPC3-207ENST00000497251 ZSCAN16Q9H4T2 348 aaPredicted RBP18.05■□□□□ 0.48
TRAPPC3-207ENST00000497251 INTS13Q9NVM9 706 aa18.05■□□□□ 0.48
TRAPPC3-207ENST00000497251 DUS2Q9NX74 493 aaKnown RBP18.05■□□□□ 0.48
TRAPPC3-207ENST00000497251 GTF3C4Q9UKN8 822 aa18.05■□□□□ 0.48
TRAPPC3-207ENST00000497251 OTOL1A6NHN0 477 aaPredicted RBP18.04■□□□□ 0.48
TRAPPC3-207ENST00000497251 AXIN1O15169 862 aa18.04■□□□□ 0.48
TRAPPC3-207ENST00000497251 TNNC2P02585 160 aa18.04■□□□□ 0.48
TRAPPC3-207ENST00000497251 CKMP06732 381 aa18.04■□□□□ 0.48
TRAPPC3-207ENST00000497251 KRT19P08727 400 aa18.04■□□□□ 0.48
TRAPPC3-207ENST00000497251 IFNAR2P48551 515 aa18.04■□□□□ 0.48
TRAPPC3-207ENST00000497251 AMPD3Q01432 767 aa18.04■□□□□ 0.48
TRAPPC3-207ENST00000497251 ZNF77Q15935 545 aa18.04■□□□□ 0.48
TRAPPC3-207ENST00000497251 CD101Q93033 1021 aa18.04■□□□□ 0.48
TRAPPC3-207ENST00000497251 C2orf42Q9NWW7 574 aa18.04■□□□□ 0.48
TRAPPC3-207ENST00000497251 TBC1D7Q9P0N9 293 aa18.04■□□□□ 0.48
TRAPPC3-207ENST00000497251 MAGEC2Q9UBF1 373 aaPredicted RBP18.04■□□□□ 0.48
TRAPPC3-207ENST00000497251 ARHGAP26Q9UNA1 814 aa18.04■□□□□ 0.48
TRAPPC3-207ENST00000497251 RNF40O75150 1001 aa18.03■□□□□ 0.48
TRAPPC3-207ENST00000497251 RHOBTB1O94844 696 aa18.03■□□□□ 0.48
TRAPPC3-207ENST00000497251 APBB3O95704 486 aa18.03■□□□□ 0.48
TRAPPC3-207ENST00000497251 HDCP19113 662 aa18.03■□□□□ 0.48
TRAPPC3-207ENST00000497251 USP4Q13107 963 aa18.03■□□□□ 0.48
TRAPPC3-207ENST00000497251 KCNB1Q14721 858 aa18.03■□□□□ 0.48
TRAPPC3-207ENST00000497251 ELF2Q15723 593 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms