RNA–Protein interactions for RNA: ENST00000496810.1

COL20A1-208, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-208ENST00000496810 CFAP221Q4G0U5 840 aa20.89■□□□□ 0.93
COL20A1-208ENST00000496810 C1orf220Q5T0J3 134 aa20.89■□□□□ 0.93
COL20A1-208ENST00000496810 DPH6Q7L8W6 267 aa20.89■□□□□ 0.93
COL20A1-208ENST00000496810 SPATA2LQ8IUW3 424 aaPredicted RBP20.89■□□□□ 0.93
COL20A1-208ENST00000496810 SLC9A9Q8IVB4 645 aa20.89■□□□□ 0.93
COL20A1-208ENST00000496810 SMYD4Q8IYR2 804 aaPredicted RBP20.89■□□□□ 0.93
COL20A1-208ENST00000496810 ZNF687Q8N1G0 1237 aa20.89■□□□□ 0.93
COL20A1-208ENST00000496810 RIN3Q8TB24 985 aa20.89■□□□□ 0.93
COL20A1-208ENST00000496810 SLC46A2Q9BY10 475 aa20.89■□□□□ 0.93
COL20A1-208ENST00000496810 GPR88Q9GZN0 384 aa20.89■□□□□ 0.93
COL20A1-208ENST00000496810 TASP1Q9H6P5 420 aa20.89■□□□□ 0.93
COL20A1-208ENST00000496810 SMYD3Q9H7B4 428 aa20.89■□□□□ 0.93
COL20A1-208ENST00000496810 CCL26Q9Y258 94 aa20.89■□□□□ 0.93
COL20A1-208ENST00000496810 ZNF292O60281 2723 aa20.88■□□□□ 0.93
COL20A1-208ENST00000496810 FAM170BA6NMN3 283 aa20.88■□□□□ 0.93
COL20A1-208ENST00000496810 PDXKO00764 312 aa20.88■□□□□ 0.93
COL20A1-208ENST00000496810 VNN1O95497 513 aa20.88■□□□□ 0.93
COL20A1-208ENST00000496810 CDC25CP30307 473 aa20.88■□□□□ 0.93
COL20A1-208ENST00000496810 NBL1P41271 181 aa20.88■□□□□ 0.93
COL20A1-208ENST00000496810 SOX9P48436 509 aa20.88■□□□□ 0.93
COL20A1-208ENST00000496810 CLDN10P78369 228 aa20.88■□□□□ 0.93
COL20A1-208ENST00000496810 FZD5Q13467 585 aa20.88■□□□□ 0.93
COL20A1-208ENST00000496810 BIRC3Q13489 604 aa20.88■□□□□ 0.93
COL20A1-208ENST00000496810 BECN1Q14457 450 aa20.88■□□□□ 0.93
COL20A1-208ENST00000496810 TAF12Q16514 161 aa20.88■□□□□ 0.93
COL20A1-208ENST00000496810 WDR72Q3MJ13 1102 aa20.88■□□□□ 0.93
COL20A1-208ENST00000496810 ARHGAP15Q53QZ3 475 aa20.88■□□□□ 0.93
COL20A1-208ENST00000496810 SCN4BQ8IWT1 228 aa20.88■□□□□ 0.93
COL20A1-208ENST00000496810 MAML2Q8IZL2 1156 aaPredicted RBP20.88■□□□□ 0.93
COL20A1-208ENST00000496810 IRF7Q92985 503 aa20.88■□□□□ 0.93
COL20A1-208ENST00000496810 PCED1BQ96HM7 432 aa20.88■□□□□ 0.93
COL20A1-208ENST00000496810 TMEM30AQ9NV96 361 aa20.88■□□□□ 0.93
COL20A1-208ENST00000496810 NXF1Q9UBU9 619 aaKnown RBP20.88■□□□□ 0.93
COL20A1-208ENST00000496810 CDH9Q9ULB4 789 aa20.88■□□□□ 0.93
COL20A1-208ENST00000496810 PIAS3Q9Y6X2 628 aa20.88■□□□□ 0.93
COL20A1-208ENST00000496810 MYH10P35580 1976 aa20.87■□□□□ 0.93
COL20A1-208ENST00000496810 SLC38A8A6NNN8 435 aa20.87■□□□□ 0.93
COL20A1-208ENST00000496810 ZNF263O14978 683 aa20.87■□□□□ 0.93
COL20A1-208ENST00000496810 NOL4O94818 638 aa20.87■□□□□ 0.93
COL20A1-208ENST00000496810 FGF19O95750 216 aa20.87■□□□□ 0.93
COL20A1-208ENST00000496810 CACNA2D1P54289 1103 aa20.87■□□□□ 0.93
COL20A1-208ENST00000496810 TNNC1P63316 161 aa20.87■□□□□ 0.93
COL20A1-208ENST00000496810 PNOCQ13519 176 aa20.87■□□□□ 0.93
COL20A1-208ENST00000496810 MDH1BQ5I0G3 518 aa20.87■□□□□ 0.93
COL20A1-208ENST00000496810 CEP135Q66GS9 1140 aa20.87■□□□□ 0.93
COL20A1-208ENST00000496810 TXNDC8Q6A555 127 aa20.87■□□□□ 0.93
COL20A1-208ENST00000496810 SCARA5Q6ZMJ2 495 aa20.87■□□□□ 0.93
COL20A1-208ENST00000496810 ASCL5Q7RTU5 278 aa20.87■□□□□ 0.93
COL20A1-208ENST00000496810 MAB21L3Q8N8X9 362 aa20.87■□□□□ 0.93
COL20A1-208ENST00000496810 TTC8Q8TAM2 541 aa20.87■□□□□ 0.93
COL20A1-208ENST00000496810 GCNAQ96QF7 691 aa20.87■□□□□ 0.93
COL20A1-208ENST00000496810 SDCBP2Q9H190 292 aa20.87■□□□□ 0.93
COL20A1-208ENST00000496810 NDRG2Q9UN36 371 aaKnown RBP20.87■□□□□ 0.93
COL20A1-208ENST00000496810 EP300Q09472 2414 aaPredicted RBP20.87■□□□□ 0.93
COL20A1-208ENST00000496810 GPR179Q6PRD1 2367 aa20.87■□□□□ 0.93
COL20A1-208ENST00000496810 PTPRZ1P23471 2315 aaPredicted RBP20.87■□□□□ 0.93
COL20A1-208ENST00000496810 DMXL1Q9Y485 3027 aa20.86■□□□□ 0.93
COL20A1-208ENST00000496810 GFRA3O60609 400 aa20.86■□□□□ 0.93
COL20A1-208ENST00000496810 TACC1O75410 805 aa20.86■□□□□ 0.93
COL20A1-208ENST00000496810 STAU1O95793 577 aaKnown RBP20.86■□□□□ 0.93
COL20A1-208ENST00000496810 C4BPAP04003 597 aaKnown RBP20.86■□□□□ 0.93
COL20A1-208ENST00000496810 BDNFP23560 247 aa20.86■□□□□ 0.93
COL20A1-208ENST00000496810 CDH8P55286 799 aa20.86■□□□□ 0.93
COL20A1-208ENST00000496810 CYP27A1Q02318 531 aa20.86■□□□□ 0.93
COL20A1-208ENST00000496810 TNK2Q07912 1038 aa20.86■□□□□ 0.93
COL20A1-208ENST00000496810 TRPC3Q13507 836 aa20.86■□□□□ 0.93
COL20A1-208ENST00000496810 WDR44Q5JSH3 913 aa20.86■□□□□ 0.93
COL20A1-208ENST00000496810 FMR1NBQ8N0W7 255 aaPredicted RBP20.86■□□□□ 0.93
COL20A1-208ENST00000496810 TMEM174Q8WUU8 243 aa20.86■□□□□ 0.93
COL20A1-208ENST00000496810 ERCC4Q92889 916 aaPredicted RBP20.86■□□□□ 0.93
COL20A1-208ENST00000496810 FUBP3Q96I24 572 aaKnown RBP eCLIP20.86■□□□□ 0.93
COL20A1-208ENST00000496810 IRF2BPLQ9H1B7 796 aa20.86■□□□□ 0.93
COL20A1-208ENST00000496810 PROB1E7EW31 1015 aa20.85■□□□□ 0.93
COL20A1-208ENST00000496810 PHACTR2O75167 634 aa20.85■□□□□ 0.93
COL20A1-208ENST00000496810 CSH1P0DML2 217 aa20.85■□□□□ 0.93
COL20A1-208ENST00000496810 CSH2P0DML3 217 aa20.85■□□□□ 0.93
COL20A1-208ENST00000496810 MAGEA11P43364 429 aa20.85■□□□□ 0.93
COL20A1-208ENST00000496810 USP46P62068 366 aa20.85■□□□□ 0.93
COL20A1-208ENST00000496810 RPL10AP62906 217 aaKnown RBP20.85■□□□□ 0.93
COL20A1-208ENST00000496810 NCOA4Q13772 614 aa20.85■□□□□ 0.93
COL20A1-208ENST00000496810 ZNF699Q32M78 642 aa20.85■□□□□ 0.93
COL20A1-208ENST00000496810 ZCWPW2Q504Y3 356 aa20.85■□□□□ 0.93
COL20A1-208ENST00000496810 ZNF852Q6ZMS4 543 aa20.85■□□□□ 0.93
COL20A1-208ENST00000496810 C1orf210Q8IVY1 113 aa20.85■□□□□ 0.93
COL20A1-208ENST00000496810 YAF2Q8IY57 180 aa20.85■□□□□ 0.93
COL20A1-208ENST00000496810 CMTM8Q8IZV2 173 aa20.85■□□□□ 0.93
COL20A1-208ENST00000496810 OR6B3Q8NGW1 331 aa20.85■□□□□ 0.93
COL20A1-208ENST00000496810 MYCBPAPQ8TBZ2 947 aa20.85■□□□□ 0.93
COL20A1-208ENST00000496810 USP13Q92995 863 aaPredicted RBP20.85■□□□□ 0.93
COL20A1-208ENST00000496810 SLC22A12Q96S37 553 aa20.85■□□□□ 0.93
COL20A1-208ENST00000496810 ZNF518BQ9C0D4 1074 aa20.85■□□□□ 0.93
COL20A1-208ENST00000496810 SNX25Q9H3E2 840 aa20.85■□□□□ 0.93
COL20A1-208ENST00000496810 TRPV5Q9NQA5 729 aa20.85■□□□□ 0.93
COL20A1-208ENST00000496810 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.85■□□□□ 0.93
COL20A1-208ENST00000496810 GTSE1Q9NYZ3 720 aa20.85■□□□□ 0.93
COL20A1-208ENST00000496810 TRAF3IP3Q9Y228 551 aa20.85■□□□□ 0.93
COL20A1-208ENST00000496810 R4GN57 208 aa20.85■□□□□ 0.93
COL20A1-208ENST00000496810 OTOGLQ3ZCN5 2332 aa20.85■□□□□ 0.93
COL20A1-208ENST00000496810 SPTBN4Q9H254 2564 aa20.85■□□□□ 0.93
COL20A1-208ENST00000496810 MYO16Q9Y6X6 1858 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms