RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 KIAA1191Q96A73 305 aa4.6□□□□□ -1.67
CLK1-214ENST00000496205 ZBTB9Q96C00 473 aa4.6□□□□□ -1.67
CLK1-214ENST00000496205 FAM167AQ96KS9 214 aa4.6□□□□□ -1.67
CLK1-214ENST00000496205 CCDC138Q96M89 665 aa4.6□□□□□ -1.67
CLK1-214ENST00000496205 MYD88Q99836 296 aa4.6□□□□□ -1.67
CLK1-214ENST00000496205 HEPHQ9BQS7 1158 aa4.6□□□□□ -1.67
CLK1-214ENST00000496205 MRI1Q9BV20 369 aa4.6□□□□□ -1.67
CLK1-214ENST00000496205 BRIP1Q9BX63 1249 aa4.6□□□□□ -1.67
CLK1-214ENST00000496205 REXO4Q9GZR2 422 aaKnown RBP4.6□□□□□ -1.67
CLK1-214ENST00000496205 BTBD1Q9H0C5 482 aa4.6□□□□□ -1.67
CLK1-214ENST00000496205 NUP62CLQ9H1M0 184 aa4.6□□□□□ -1.67
CLK1-214ENST00000496205 WDCPQ9H6R7 721 aa4.6□□□□□ -1.67
CLK1-214ENST00000496205 CPNE5Q9HCH3 593 aa4.6□□□□□ -1.67
CLK1-214ENST00000496205 NLRC4Q9NPP4 1024 aa4.6□□□□□ -1.67
CLK1-214ENST00000496205 SLAMF7Q9NQ25 335 aa4.6□□□□□ -1.67
CLK1-214ENST00000496205 PLCB1Q9NQ66 1216 aa4.6□□□□□ -1.67
CLK1-214ENST00000496205 MRPS18AQ9NVS2 196 aaKnown RBP4.6□□□□□ -1.67
CLK1-214ENST00000496205 TPCN1Q9ULQ1 816 aa4.6□□□□□ -1.67
CLK1-214ENST00000496205 RHPN2P1A8MT19 583 aa4.59□□□□□ -1.67
CLK1-214ENST00000496205 IFRD1O00458 451 aaPredicted RBP4.59□□□□□ -1.67
CLK1-214ENST00000496205 KIAA0391O15091 583 aaKnown RBP4.59□□□□□ -1.67
CLK1-214ENST00000496205 ARIH2O95376 493 aa4.59□□□□□ -1.67
CLK1-214ENST00000496205 ELFN1P0C7U0 828 aa4.59□□□□□ -1.67
CLK1-214ENST00000496205 ATP5JP18859 108 aa4.59□□□□□ -1.67
CLK1-214ENST00000496205 EN2P19622 333 aaPredicted RBP4.59□□□□□ -1.67
CLK1-214ENST00000496205 TNFSF4P23510 183 aa4.59□□□□□ -1.67
CLK1-214ENST00000496205 ITPKBP27987 946 aa4.59□□□□□ -1.67
CLK1-214ENST00000496205 SMARCA1P28370 1054 aa4.59□□□□□ -1.67
CLK1-214ENST00000496205 IL6STP40189 918 aaPredicted RBP4.59□□□□□ -1.67
CLK1-214ENST00000496205 TRAPPC10P48553 1259 aa4.59□□□□□ -1.67
CLK1-214ENST00000496205 HTRA4P83105 476 aaPredicted RBP4.59□□□□□ -1.67
CLK1-214ENST00000496205 OS9Q13438 667 aaPredicted RBP4.59□□□□□ -1.67
CLK1-214ENST00000496205 CNGA2Q16280 664 aa4.59□□□□□ -1.67
CLK1-214ENST00000496205 GEN1Q17RS7 908 aa4.59□□□□□ -1.67
CLK1-214ENST00000496205 CCDC93Q567U6 631 aa4.59□□□□□ -1.67
CLK1-214ENST00000496205 C3orf38Q5JPI3 329 aa4.59□□□□□ -1.67
CLK1-214ENST00000496205 KHDC1LQ5JSQ8 128 aa4.59□□□□□ -1.67
CLK1-214ENST00000496205 GORABQ5T7V8 394 aa4.59□□□□□ -1.67
CLK1-214ENST00000496205 KLHDC7AQ5VTJ3 777 aa4.59□□□□□ -1.67
CLK1-214ENST00000496205 KIAA0895LQ68EN5 471 aa4.59□□□□□ -1.67
CLK1-214ENST00000496205 ZNF529Q6P280 563 aa4.59□□□□□ -1.67
CLK1-214ENST00000496205 C11orf96Q7Z7L8 435 aa4.59□□□□□ -1.67
CLK1-214ENST00000496205 FAM186BQ8IYM0 893 aa4.59□□□□□ -1.67
CLK1-214ENST00000496205 IL17RDQ8NFM7 739 aa4.59□□□□□ -1.67
CLK1-214ENST00000496205 SSH3Q8TE77 659 aa4.59□□□□□ -1.67
CLK1-214ENST00000496205 TNPO1Q92973 898 aaKnown RBP4.59□□□□□ -1.67
CLK1-214ENST00000496205 SARAFQ96BY9 339 aa4.59□□□□□ -1.67
CLK1-214ENST00000496205 MTFMTQ96DP5 389 aaKnown RBP4.59□□□□□ -1.67
CLK1-214ENST00000496205 TRIM54Q9BYV2 358 aa4.59□□□□□ -1.67
CLK1-214ENST00000496205 MYH16Q9H6N6 1097 aa4.59□□□□□ -1.67
CLK1-214ENST00000496205 SMURF2Q9HAU4 748 aa4.59□□□□□ -1.67
CLK1-214ENST00000496205 MOCS1Q9NZB8 636 aa4.59□□□□□ -1.67
CLK1-214ENST00000496205 COL20A1Q9P218 1284 aa4.59□□□□□ -1.67
CLK1-214ENST00000496205 AGAP1Q9UPQ3 857 aa4.59□□□□□ -1.67
CLK1-214ENST00000496205 ENTPD2Q9Y5L3 495 aa4.59□□□□□ -1.67
CLK1-214ENST00000496205 AOX1Q06278 1338 aa4.58□□□□□ -1.68
CLK1-214ENST00000496205 POM121BA6NF01 834 aa4.58□□□□□ -1.68
CLK1-214ENST00000496205 TP73O15350 636 aa4.58□□□□□ -1.68
CLK1-214ENST00000496205 KCNAB3O43448 404 aa4.58□□□□□ -1.68
CLK1-214ENST00000496205 PEX1O43933 1283 aa4.58□□□□□ -1.68
CLK1-214ENST00000496205 FTH1P19P0C7X4 201 aa4.58□□□□□ -1.68
CLK1-214ENST00000496205 BRAFP15056 766 aa4.58□□□□□ -1.68
CLK1-214ENST00000496205 FOLR3P41439 243 aa4.58□□□□□ -1.68
CLK1-214ENST00000496205 PIK3CGP48736 1102 aa4.58□□□□□ -1.68
CLK1-214ENST00000496205 IFIT5Q13325 482 aaKnown RBP4.58□□□□□ -1.68
CLK1-214ENST00000496205 SRSF7Q16629 238 aaKnown RBP eCLIP4.58□□□□□ -1.68
CLK1-214ENST00000496205 PABPC1LQ4VXU2 614 aaKnown RBP4.58□□□□□ -1.68
CLK1-214ENST00000496205 EMC10Q5UCC4 262 aa4.58□□□□□ -1.68
CLK1-214ENST00000496205 PTF1AQ7RTS3 328 aa4.58□□□□□ -1.68
CLK1-214ENST00000496205 BRIX1Q8TDN6 353 aaKnown RBP4.58□□□□□ -1.68
CLK1-214ENST00000496205 HASPINQ8TF76 798 aa4.58□□□□□ -1.68
CLK1-214ENST00000496205 DPH1Q9BZG8 443 aa4.58□□□□□ -1.68
CLK1-214ENST00000496205 LRRC27Q9C0I9 530 aa4.58□□□□□ -1.68
CLK1-214ENST00000496205 AS3MTQ9HBK9 375 aa4.58□□□□□ -1.68
CLK1-214ENST00000496205 GJB4Q9NTQ9 266 aa4.58□□□□□ -1.68
CLK1-214ENST00000496205 HSFX1Q9UBD0 423 aa4.58□□□□□ -1.68
CLK1-214ENST00000496205 CDC23Q9UJX2 597 aa4.58□□□□□ -1.68
CLK1-214ENST00000496205 MTO1Q9Y2Z2 717 aaKnown RBP4.58□□□□□ -1.68
CLK1-214ENST00000496205 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.58□□□□□ -1.68
CLK1-214ENST00000496205 TMEM233B4DJY2 109 aa4.57□□□□□ -1.68
CLK1-214ENST00000496205 E9PLN8 166 aa4.57□□□□□ -1.68
CLK1-214ENST00000496205 SLC43A1O75387 559 aa4.57□□□□□ -1.68
CLK1-214ENST00000496205 EIF3JO75822 258 aaKnown RBP4.57□□□□□ -1.68
CLK1-214ENST00000496205 DNAJB5O75953 348 aa4.57□□□□□ -1.68
CLK1-214ENST00000496205 POMCP01189 267 aa4.57□□□□□ -1.68
CLK1-214ENST00000496205 WT1P19544 449 aaPredicted RBP4.57□□□□□ -1.68
CLK1-214ENST00000496205 ABCB4P21439 1286 aa4.57□□□□□ -1.68
CLK1-214ENST00000496205 MAPK10P53779 464 aa4.57□□□□□ -1.68
CLK1-214ENST00000496205 RPS16P62249 146 aaKnown RBP4.57□□□□□ -1.68
CLK1-214ENST00000496205 NOMO3P69849 1222 aa4.57□□□□□ -1.68
CLK1-214ENST00000496205 SSBP2P81877 361 aaPredicted RBP4.57□□□□□ -1.68
CLK1-214ENST00000496205 PMS2P11Q13670 270 aa4.57□□□□□ -1.68
CLK1-214ENST00000496205 DHX8Q14562 1220 aaKnown RBP4.57□□□□□ -1.68
CLK1-214ENST00000496205 KIF22Q14807 665 aa4.57□□□□□ -1.68
CLK1-214ENST00000496205 SF3B3Q15393 1217 aaKnown RBP4.57□□□□□ -1.68
CLK1-214ENST00000496205 GPR162Q16538 588 aa4.57□□□□□ -1.68
CLK1-214ENST00000496205 FOXR2Q6PJQ5 311 aa4.57□□□□□ -1.68
CLK1-214ENST00000496205 TSHZ1Q6ZSZ6 1077 aa4.57□□□□□ -1.68
CLK1-214ENST00000496205 MICU3Q86XE3 530 aa4.57□□□□□ -1.68
CLK1-214ENST00000496205 PCSK9Q8NBP7 692 aaKnown RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms