RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 PLCD3Q8N3E9 789 aa10.47□□□□□ -0.73
CALD1-223ENST00000496024 MYCBPAPQ8TBZ2 947 aa10.47□□□□□ -0.73
CALD1-223ENST00000496024 FGF13Q92913 245 aa10.47□□□□□ -0.73
CALD1-223ENST00000496024 MCRS1Q96EZ8 462 aa10.47□□□□□ -0.73
CALD1-223ENST00000496024 PCED1BQ96HM7 432 aa10.47□□□□□ -0.73
CALD1-223ENST00000496024 TWNKQ96RR1 684 aa10.47□□□□□ -0.73
CALD1-223ENST00000496024 ARID3AQ99856 593 aa10.47□□□□□ -0.73
CALD1-223ENST00000496024 B3GNT5Q9BYG0 378 aa10.47□□□□□ -0.73
CALD1-223ENST00000496024 BCO2Q9BYV7 579 aa10.47□□□□□ -0.73
CALD1-223ENST00000496024 ZNF334Q9HCZ1 680 aaPredicted RBP10.47□□□□□ -0.73
CALD1-223ENST00000496024 SAMSN1Q9NSI8 373 aaKnown RBP10.47□□□□□ -0.73
CALD1-223ENST00000496024 FAM49BQ9NUQ9 324 aa10.47□□□□□ -0.73
CALD1-223ENST00000496024 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.47□□□□□ -0.73
CALD1-223ENST00000496024 HSFX1Q9UBD0 423 aa10.47□□□□□ -0.73
CALD1-223ENST00000496024 MAGED2Q9UNF1 606 aaPredicted RBP10.47□□□□□ -0.73
CALD1-223ENST00000496024 COQ4Q9Y3A0 265 aa10.47□□□□□ -0.73
CALD1-223ENST00000496024 PTPRDP23468 1912 aa10.46□□□□□ -0.73
CALD1-223ENST00000496024 A0A1W2PRU2 124 aa10.46□□□□□ -0.73
CALD1-223ENST00000496024 PES1O00541 588 aaKnown RBP10.46□□□□□ -0.73
CALD1-223ENST00000496024 ZNF197O14709 1029 aa10.46□□□□□ -0.73
CALD1-223ENST00000496024 LAMP2P13473 410 aa10.46□□□□□ -0.73
CALD1-223ENST00000496024 CCDC130P13994 396 aa10.46□□□□□ -0.73
CALD1-223ENST00000496024 GRIK1P39086 918 aa10.46□□□□□ -0.73
CALD1-223ENST00000496024 MARSP56192 900 aaKnown RBP10.46□□□□□ -0.73
CALD1-223ENST00000496024 RPL10AP62906 217 aaKnown RBP10.46□□□□□ -0.73
CALD1-223ENST00000496024 TYRO3Q06418 890 aa10.46□□□□□ -0.73
CALD1-223ENST00000496024 CETN1Q12798 172 aa10.46□□□□□ -0.73
CALD1-223ENST00000496024 MTMR3Q13615 1198 aa10.46□□□□□ -0.73
CALD1-223ENST00000496024 ITIH5Q86UX2 942 aa10.46□□□□□ -0.73
CALD1-223ENST00000496024 FAM114A1Q8IWE2 563 aa10.46□□□□□ -0.73
CALD1-223ENST00000496024 ZDHHC14Q8IZN3 488 aa10.46□□□□□ -0.73
CALD1-223ENST00000496024 C12orf29Q8N999 325 aa10.46□□□□□ -0.73
CALD1-223ENST00000496024 RSAD2Q8WXG1 361 aa10.46□□□□□ -0.73
CALD1-223ENST00000496024 PSMG2Q969U7 264 aa10.46□□□□□ -0.73
CALD1-223ENST00000496024 FUBP3Q96I24 572 aaKnown RBP eCLIP10.46□□□□□ -0.73
CALD1-223ENST00000496024 TNIP3Q96KP6 325 aa10.46□□□□□ -0.73
CALD1-223ENST00000496024 NT5C1BQ96P26 610 aa10.46□□□□□ -0.73
CALD1-223ENST00000496024 CRACR2AQ9BSW2 395 aa10.46□□□□□ -0.73
CALD1-223ENST00000496024 ZNF518BQ9C0D4 1074 aa10.46□□□□□ -0.73
CALD1-223ENST00000496024 THAP9Q9H5L6 903 aa10.46□□□□□ -0.73
CALD1-223ENST00000496024 SLITRK6Q9H5Y7 841 aa10.46□□□□□ -0.73
CALD1-223ENST00000496024 CYP3A43Q9HB55 503 aa10.46□□□□□ -0.73
CALD1-223ENST00000496024 ABCB6Q9NP58 842 aa10.46□□□□□ -0.73
CALD1-223ENST00000496024 CISHQ9NSE2 258 aa10.46□□□□□ -0.73
CALD1-223ENST00000496024 CDH7Q9ULB5 785 aa10.46□□□□□ -0.73
CALD1-223ENST00000496024 NFE2L3Q9Y4A8 694 aa10.46□□□□□ -0.73
CALD1-223ENST00000496024 ASB3Q9Y575 518 aa10.46□□□□□ -0.73
CALD1-223ENST00000496024 ZNF638Q14966 1978 aaKnown RBP10.45□□□□□ -0.74
CALD1-223ENST00000496024 SLC38A8A6NNN8 435 aa10.45□□□□□ -0.74
CALD1-223ENST00000496024 KCNJ18B7U540 433 aa10.45□□□□□ -0.74
CALD1-223ENST00000496024 F8VP50 259 aa10.45□□□□□ -0.74
CALD1-223ENST00000496024 PRKCSHP14314 528 aaPredicted RBP10.45□□□□□ -0.74
CALD1-223ENST00000496024 ANXA13P27216 316 aa10.45□□□□□ -0.74
CALD1-223ENST00000496024 GABRR2P28476 465 aa10.45□□□□□ -0.74
CALD1-223ENST00000496024 ADORA2BP29275 332 aa10.45□□□□□ -0.74
CALD1-223ENST00000496024 CACNA2D1P54289 1103 aa10.45□□□□□ -0.74
CALD1-223ENST00000496024 CYP4F8P98187 520 aa10.45□□□□□ -0.74
CALD1-223ENST00000496024 IFRD2Q12894 506 aaPredicted RBP10.45□□□□□ -0.74
CALD1-223ENST00000496024 CUL2Q13617 745 aa10.45□□□□□ -0.74
CALD1-223ENST00000496024 KCNJ12Q14500 433 aa10.45□□□□□ -0.74
CALD1-223ENST00000496024 TEAD2Q15562 447 aa10.45□□□□□ -0.74
CALD1-223ENST00000496024 CFAP221Q4G0U5 840 aa10.45□□□□□ -0.74
CALD1-223ENST00000496024 CT47A1Q5JQC4 288 aaPredicted RBP10.45□□□□□ -0.74
CALD1-223ENST00000496024 PRSS36Q5K4E3 855 aa10.45□□□□□ -0.74
CALD1-223ENST00000496024 RRAGAQ7L523 313 aa10.45□□□□□ -0.74
CALD1-223ENST00000496024 FAM35AQ86V20 835 aa10.45□□□□□ -0.74
CALD1-223ENST00000496024 UNC93AQ86WB7 457 aa10.45□□□□□ -0.74
CALD1-223ENST00000496024 TMC8Q8IU68 726 aa10.45□□□□□ -0.74
CALD1-223ENST00000496024 GPIHBP1Q8IV16 184 aa10.45□□□□□ -0.74
CALD1-223ENST00000496024 ARHGEF19Q8IW93 802 aa10.45□□□□□ -0.74
CALD1-223ENST00000496024 NPAS3Q8IXF0 933 aa10.45□□□□□ -0.74
CALD1-223ENST00000496024 PPM1KQ8N3J5 372 aa10.45□□□□□ -0.74
CALD1-223ENST00000496024 EHBP1Q8NDI1 1231 aa10.45□□□□□ -0.74
CALD1-223ENST00000496024 SHKBP1Q8TBC3 707 aa10.45□□□□□ -0.74
CALD1-223ENST00000496024 SLC2A14Q8TDB8 520 aa10.45□□□□□ -0.74
CALD1-223ENST00000496024 WHAMMQ8TF30 809 aa10.45□□□□□ -0.74
CALD1-223ENST00000496024 KAT5Q92993 513 aa10.45□□□□□ -0.74
CALD1-223ENST00000496024 JAKMIP2Q96AA8 810 aa10.45□□□□□ -0.74
CALD1-223ENST00000496024 HEXIM2Q96MH2 286 aaKnown RBP10.45□□□□□ -0.74
CALD1-223ENST00000496024 NT5C1AQ9BXI3 368 aa10.45□□□□□ -0.74
CALD1-223ENST00000496024 LRRC3Q9BY71 257 aa10.45□□□□□ -0.74
CALD1-223ENST00000496024 ELOVL4Q9GZR5 314 aa10.45□□□□□ -0.74
CALD1-223ENST00000496024 INTS2Q9H0H0 1204 aaKnown RBP10.45□□□□□ -0.74
CALD1-223ENST00000496024 ATXN3LQ9H3M9 355 aa10.45□□□□□ -0.74
CALD1-223ENST00000496024 SMOC2Q9H3U7 446 aa10.45□□□□□ -0.74
CALD1-223ENST00000496024 EPS15L1Q9UBC2 864 aa10.45□□□□□ -0.74
CALD1-223ENST00000496024 MUC3AQ02505 3323 aa10.45□□□□□ -0.74
CALD1-223ENST00000496024 ATP8B3O60423 1300 aa10.44□□□□□ -0.74
CALD1-223ENST00000496024 SYCE3A1L190 88 aa10.44□□□□□ -0.74
CALD1-223ENST00000496024 PMM2O15305 246 aa10.44□□□□□ -0.74
CALD1-223ENST00000496024 P4HA2O15460 535 aa10.44□□□□□ -0.74
CALD1-223ENST00000496024 DCXO43602 365 aa10.44□□□□□ -0.74
CALD1-223ENST00000496024 CILPO75339 1184 aa10.44□□□□□ -0.74
CALD1-223ENST00000496024 MOSPD3O75425 235 aa10.44□□□□□ -0.74
CALD1-223ENST00000496024 AP1G2O75843 785 aa10.44□□□□□ -0.74
CALD1-223ENST00000496024 CSH1P0DML2 217 aa10.44□□□□□ -0.74
CALD1-223ENST00000496024 CSH2P0DML3 217 aa10.44□□□□□ -0.74
CALD1-223ENST00000496024 TRIM21P19474 475 aaKnown RBP10.44□□□□□ -0.74
CALD1-223ENST00000496024 SLC9A1P19634 815 aa10.44□□□□□ -0.74
CALD1-223ENST00000496024 PTMSP20962 102 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms