RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 IL1R1P14778 569 aa6.99□□□□□ -1.29
CCDC39-207ENST00000495817 FDXRP22570 491 aa6.99□□□□□ -1.29
CCDC39-207ENST00000495817 CARSP49589 748 aaKnown RBP6.99□□□□□ -1.29
CCDC39-207ENST00000495817 WNT3P56703 355 aa6.99□□□□□ -1.29
CCDC39-207ENST00000495817 TGFB2P61812 414 aa6.99□□□□□ -1.29
CCDC39-207ENST00000495817 ICA1Q05084 483 aa6.99□□□□□ -1.29
CCDC39-207ENST00000495817 TRIM14Q14142 442 aa6.99□□□□□ -1.29
CCDC39-207ENST00000495817 STARD3Q14849 445 aa6.99□□□□□ -1.29
CCDC39-207ENST00000495817 FOXR2Q6PJQ5 311 aa6.99□□□□□ -1.29
CCDC39-207ENST00000495817 UNC13DQ70J99 1090 aa6.99□□□□□ -1.29
CCDC39-207ENST00000495817 RNF44Q7L0R7 432 aa6.99□□□□□ -1.29
CCDC39-207ENST00000495817 LDLRAD3Q86YD5 345 aa6.99□□□□□ -1.29
CCDC39-207ENST00000495817 TMEM132CQ8N3T6 1108 aa6.99□□□□□ -1.29
CCDC39-207ENST00000495817 MYRIPQ8NFW9 859 aa6.99□□□□□ -1.29
CCDC39-207ENST00000495817 OR56A3Q8NH54 315 aa6.99□□□□□ -1.29
CCDC39-207ENST00000495817 ZNF566Q969W8 418 aa6.99□□□□□ -1.29
CCDC39-207ENST00000495817 FUBP1Q96AE4 644 aaKnown RBP6.99□□□□□ -1.29
CCDC39-207ENST00000495817 MOGAT1Q96PD6 335 aa6.99□□□□□ -1.29
CCDC39-207ENST00000495817 STK33Q9BYT3 514 aa6.99□□□□□ -1.29
CCDC39-207ENST00000495817 CHST8Q9H2A9 424 aa6.99□□□□□ -1.29
CCDC39-207ENST00000495817 XPR1Q9UBH6 696 aa6.99□□□□□ -1.29
CCDC39-207ENST00000495817 AGAP1Q9UPQ3 857 aa6.99□□□□□ -1.29
CCDC39-207ENST00000495817 NOX1Q9Y5S8 564 aa6.99□□□□□ -1.29
CCDC39-207ENST00000495817 E9PLN8 166 aa6.98□□□□□ -1.29
CCDC39-207ENST00000495817 M0QYG6 137 aa6.98□□□□□ -1.29
CCDC39-207ENST00000495817 FFAR2O15552 330 aa6.98□□□□□ -1.29
CCDC39-207ENST00000495817 GPANK1O95872 356 aa6.98□□□□□ -1.29
CCDC39-207ENST00000495817 CYP2C9P11712 490 aa6.98□□□□□ -1.29
CCDC39-207ENST00000495817 FGFR4P22455 802 aa6.98□□□□□ -1.29
CCDC39-207ENST00000495817 VIPR2P41587 438 aa6.98□□□□□ -1.29
CCDC39-207ENST00000495817 HMGA2P52926 109 aa6.98□□□□□ -1.29
CCDC39-207ENST00000495817 ABHD17BQ5VST6 288 aa6.98□□□□□ -1.29
CCDC39-207ENST00000495817 ZNF627Q7L945 461 aa6.98□□□□□ -1.29
CCDC39-207ENST00000495817 TXLNBQ8N3L3 684 aa6.98□□□□□ -1.29
CCDC39-207ENST00000495817 MPP5Q8N3R9 675 aa6.98□□□□□ -1.29
CCDC39-207ENST00000495817 PDPRQ8NCN5 879 aa6.98□□□□□ -1.29
CCDC39-207ENST00000495817 CYP2W1Q8TAV3 490 aa6.98□□□□□ -1.29
CCDC39-207ENST00000495817 SPSB4Q96A44 273 aa6.98□□□□□ -1.29
CCDC39-207ENST00000495817 BOD1Q96IK1 185 aa6.98□□□□□ -1.29
CCDC39-207ENST00000495817 ADAM2Q99965 735 aa6.98□□□□□ -1.29
CCDC39-207ENST00000495817 VKORC1Q9BQB6 163 aa6.98□□□□□ -1.29
CCDC39-207ENST00000495817 MRIQ9BWK5 157 aa6.98□□□□□ -1.29
CCDC39-207ENST00000495817 KRTAP4-5Q9BYR2 181 aa6.98□□□□□ -1.29
CCDC39-207ENST00000495817 SERHL2Q9H4I8 314 aa6.98□□□□□ -1.29
CCDC39-207ENST00000495817 TMEM74BQ9NUR3 256 aa6.98□□□□□ -1.29
CCDC39-207ENST00000495817 MORC2Q9Y6X9 1032 aaPredicted RBP6.98□□□□□ -1.29
CCDC39-207ENST00000495817 PIP5K1CO60331 668 aa6.97□□□□□ -1.29
CCDC39-207ENST00000495817 LPXNO60711 386 aa6.97□□□□□ -1.29
CCDC39-207ENST00000495817 ELANEP08246 267 aa6.97□□□□□ -1.29
CCDC39-207ENST00000495817 MYL4P12829 197 aa6.97□□□□□ -1.29
CCDC39-207ENST00000495817 GRK6P43250 576 aa6.97□□□□□ -1.29
CCDC39-207ENST00000495817 AVPR1BP47901 424 aa6.97□□□□□ -1.29
CCDC39-207ENST00000495817 CXADRP78310 365 aa6.97□□□□□ -1.29
CCDC39-207ENST00000495817 PIGFQ07326 219 aa6.97□□□□□ -1.29
CCDC39-207ENST00000495817 SLFN5Q08AF3 891 aa6.97□□□□□ -1.29
CCDC39-207ENST00000495817 RESTQ13127 1097 aa6.97□□□□□ -1.29
CCDC39-207ENST00000495817 PUM3Q15397 648 aaKnown RBP6.97□□□□□ -1.29
CCDC39-207ENST00000495817 TUBB8Q3ZCM7 444 aa6.97□□□□□ -1.29
CCDC39-207ENST00000495817 DCAF12L1Q5VU92 463 aa6.97□□□□□ -1.29
CCDC39-207ENST00000495817 B3GNTL1Q67FW5 361 aaPredicted RBP6.97□□□□□ -1.29
CCDC39-207ENST00000495817 TLDC1Q6P9B6 456 aa6.97□□□□□ -1.29
CCDC39-207ENST00000495817 Q6ZPA2 131 aa6.97□□□□□ -1.29
CCDC39-207ENST00000495817 YAF2Q8IY57 180 aa6.97□□□□□ -1.29
CCDC39-207ENST00000495817 ZNF527Q8NB42 609 aa6.97□□□□□ -1.29
CCDC39-207ENST00000495817 ZSWIM1Q9BR11 485 aa6.97□□□□□ -1.29
CCDC39-207ENST00000495817 AGO4Q9HCK5 861 aaKnown RBP6.97□□□□□ -1.29
CCDC39-207ENST00000495817 GALNT9Q9HCQ5 603 aa6.97□□□□□ -1.29
CCDC39-207ENST00000495817 TM7SF3Q9NS93 570 aa6.97□□□□□ -1.29
CCDC39-207ENST00000495817 ITGB1BP2Q9UKP3 347 aa6.97□□□□□ -1.29
CCDC39-207ENST00000495817 MAGED2Q9UNF1 606 aaPredicted RBP6.97□□□□□ -1.29
CCDC39-207ENST00000495817 NEU2Q9Y3R4 380 aa6.97□□□□□ -1.29
CCDC39-207ENST00000495817 MYADML2A6NDP7 307 aa6.96□□□□□ -1.3
CCDC39-207ENST00000495817 GOLGA6L3A6NEY3 463 aa6.96□□□□□ -1.3
CCDC39-207ENST00000495817 TMEM233B4DJY2 109 aa6.96□□□□□ -1.3
CCDC39-207ENST00000495817 RHOBTB3O94955 611 aa6.96□□□□□ -1.3
CCDC39-207ENST00000495817 INMTO95050 263 aa6.96□□□□□ -1.3
CCDC39-207ENST00000495817 PRSS23O95084 383 aa6.96□□□□□ -1.3
CCDC39-207ENST00000495817 KIF20AO95235 890 aa6.96□□□□□ -1.3
CCDC39-207ENST00000495817 FGAP02671 866 aa6.96□□□□□ -1.3
CCDC39-207ENST00000495817 TGM1P22735 817 aa6.96□□□□□ -1.3
CCDC39-207ENST00000495817 IL1R2P27930 398 aa6.96□□□□□ -1.3
CCDC39-207ENST00000495817 ALDH9A1P49189 494 aa6.96□□□□□ -1.3
CCDC39-207ENST00000495817 HSD11B2P80365 405 aa6.96□□□□□ -1.3
CCDC39-207ENST00000495817 BLMHQ13867 455 aa6.96□□□□□ -1.3
CCDC39-207ENST00000495817 NOMO2Q5JPE7 1267 aa6.96□□□□□ -1.3
CCDC39-207ENST00000495817 CCDC174Q6PII3 467 aa6.96□□□□□ -1.3
CCDC39-207ENST00000495817 GAS2L3Q86XJ1 694 aa6.96□□□□□ -1.3
CCDC39-207ENST00000495817 CFAP52Q8N1V2 620 aa6.96□□□□□ -1.3
CCDC39-207ENST00000495817 VGLL2Q8N8G2 317 aa6.96□□□□□ -1.3
CCDC39-207ENST00000495817 SPATA5Q8NB90 893 aa6.96□□□□□ -1.3
CCDC39-207ENST00000495817 FAM46DQ8NEK8 389 aa6.96□□□□□ -1.3
CCDC39-207ENST00000495817 COQ10AQ96MF6 247 aa6.96□□□□□ -1.3
CCDC39-207ENST00000495817 SMOQ99835 787 aa6.96□□□□□ -1.3
CCDC39-207ENST00000495817 GDF15Q99988 308 aa6.96□□□□□ -1.3
CCDC39-207ENST00000495817 STK31Q9BXU1 1019 aa6.96□□□□□ -1.3
CCDC39-207ENST00000495817 ALOXE3Q9BYJ1 711 aa6.96□□□□□ -1.3
CCDC39-207ENST00000495817 MS4A7Q9GZW8 240 aaPredicted RBP6.96□□□□□ -1.3
CCDC39-207ENST00000495817 DHX36Q9H2U1 1008 aaKnown RBP6.96□□□□□ -1.3
CCDC39-207ENST00000495817 XPNPEP3Q9NQH7 507 aa6.96□□□□□ -1.3
CCDC39-207ENST00000495817 GJB4Q9NTQ9 266 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms