RNA–Protein interactions for RNA: ENST00000495705.5

LMO4-204, Transcript of LIM domain only 4, humanhuman

TSL 3

Gene LMO4, Length 565 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-204ENST00000495705 NR2E1Q9Y466 385 aa21.34■■□□□ 1.01
LMO4-204ENST00000495705 DOCK6Q96HP0 2047 aa21.33■■□□□ 1.01
LMO4-204ENST00000495705 NCOR1O75376 2440 aa21.33■■□□□ 1.01
LMO4-204ENST00000495705 BECN2A8MW95 431 aa21.33■■□□□ 1.01
LMO4-204ENST00000495705 ATF6P18850 670 aa21.33■■□□□ 1.01
LMO4-204ENST00000495705 CYP2F1P24903 491 aa21.33■■□□□ 1.01
LMO4-204ENST00000495705 KRT31Q15323 416 aa21.33■■□□□ 1.01
LMO4-204ENST00000495705 PABPC1LQ4VXU2 614 aaKnown RBP21.33■■□□□ 1.01
LMO4-204ENST00000495705 TRIM65Q6PJ69 517 aa21.33■■□□□ 1.01
LMO4-204ENST00000495705 DHX40Q8IX18 779 aaKnown RBP21.33■■□□□ 1.01
LMO4-204ENST00000495705 ADAMTS19Q8TE59 1207 aa21.33■■□□□ 1.01
LMO4-204ENST00000495705 FAM81BQ96LP2 452 aa21.33■■□□□ 1.01
LMO4-204ENST00000495705 CRACR2AQ9BSW2 395 aa21.33■■□□□ 1.01
LMO4-204ENST00000495705 AVENQ9NQS1 362 aaPredicted RBP21.33■■□□□ 1.01
LMO4-204ENST00000495705 TAB2Q9NYJ8 693 aa21.33■■□□□ 1.01
LMO4-204ENST00000495705 CEP72Q9P209 647 aa21.33■■□□□ 1.01
LMO4-204ENST00000495705 DNMT3BQ9UBC3 853 aaKnown RBP21.33■■□□□ 1.01
LMO4-204ENST00000495705 USTQ9Y2C2 406 aa21.33■■□□□ 1.01
LMO4-204ENST00000495705 SOAT2O75908 522 aa21.32■■□□□ 1
LMO4-204ENST00000495705 CDK11BP21127 795 aaKnown RBP21.32■■□□□ 1
LMO4-204ENST00000495705 CDR1P51861 262 aa21.32■■□□□ 1
LMO4-204ENST00000495705 ZP2Q05996 745 aa21.32■■□□□ 1
LMO4-204ENST00000495705 FAM200AQ8TCP9 573 aa21.32■■□□□ 1
LMO4-204ENST00000495705 WHAMMQ8TF30 809 aa21.32■■□□□ 1
LMO4-204ENST00000495705 PSMG2Q969U7 264 aa21.32■■□□□ 1
LMO4-204ENST00000495705 CEP295NLQ96MC4 621 aa21.32■■□□□ 1
LMO4-204ENST00000495705 TWNKQ96RR1 684 aa21.32■■□□□ 1
LMO4-204ENST00000495705 ASAH2Q9NR71 780 aa21.32■■□□□ 1
LMO4-204ENST00000495705 HCFC1R1Q9NWW0 138 aa21.32■■□□□ 1
LMO4-204ENST00000495705 LIMA1Q9UHB6 759 aaKnown RBP21.32■■□□□ 1
LMO4-204ENST00000495705 NOTCH4Q99466 2003 aa21.31■■□□□ 1
LMO4-204ENST00000495705 TRIM66O15016 1216 aa21.31■■□□□ 1
LMO4-204ENST00000495705 RHOP08100 348 aa21.31■■□□□ 1
LMO4-204ENST00000495705 BDNFP23560 247 aa21.31■■□□□ 1
LMO4-204ENST00000495705 ORC1Q13415 861 aa21.31■■□□□ 1
LMO4-204ENST00000495705 ENOSF1Q7L5Y1 443 aa21.31■■□□□ 1
LMO4-204ENST00000495705 OTOP3Q7RTS5 596 aa21.31■■□□□ 1
LMO4-204ENST00000495705 ARHGEF19Q8IW93 802 aa21.31■■□□□ 1
LMO4-204ENST00000495705 UBR7Q8N806 425 aa21.31■■□□□ 1
LMO4-204ENST00000495705 JAKMIP2Q96AA8 810 aa21.31■■□□□ 1
LMO4-204ENST00000495705 ACSF2Q96CM8 615 aaPredicted RBP21.31■■□□□ 1
LMO4-204ENST00000495705 LPIN3Q9BQK8 851 aa21.31■■□□□ 1
LMO4-204ENST00000495705 CORO1BQ9BR76 489 aa21.31■■□□□ 1
LMO4-204ENST00000495705 B3GNT5Q9BYG0 378 aa21.31■■□□□ 1
LMO4-204ENST00000495705 HSD3B7Q9H2F3 369 aa21.31■■□□□ 1
LMO4-204ENST00000495705 APEX2Q9UBZ4 518 aa21.31■■□□□ 1
LMO4-204ENST00000495705 ZNF197O14709 1029 aa21.3■■□□□ 1
LMO4-204ENST00000495705 CSH1P0DML2 217 aa21.3■■□□□ 1
LMO4-204ENST00000495705 CSH2P0DML3 217 aa21.3■■□□□ 1
LMO4-204ENST00000495705 SLC9A1P19634 815 aa21.3■■□□□ 1
LMO4-204ENST00000495705 FSHRP23945 695 aa21.3■■□□□ 1
LMO4-204ENST00000495705 PON1P27169 355 aa21.3■■□□□ 1
LMO4-204ENST00000495705 ANXA13P27216 316 aa21.3■■□□□ 1
LMO4-204ENST00000495705 EPHA5P54756 1037 aa21.3■■□□□ 1
LMO4-204ENST00000495705 IQCB1Q15051 598 aa21.3■■□□□ 1
LMO4-204ENST00000495705 TAF12Q16514 161 aa21.3■■□□□ 1
LMO4-204ENST00000495705 ZNF394Q53GI3 561 aa21.3■■□□□ 1
LMO4-204ENST00000495705 FKBP15Q5T1M5 1219 aa21.3■■□□□ 1
LMO4-204ENST00000495705 CYP4A22Q5TCH4 519 aa21.3■■□□□ 1
LMO4-204ENST00000495705 PHLDB3Q6NSJ2 640 aa21.3■■□□□ 1
LMO4-204ENST00000495705 PDZD4Q76G19 769 aaPredicted RBP21.3■■□□□ 1
LMO4-204ENST00000495705 FAM35AQ86V20 835 aa21.3■■□□□ 1
LMO4-204ENST00000495705 SCN4BQ8IWT1 228 aa21.3■■□□□ 1
LMO4-204ENST00000495705 TDRD5Q8NAT2 981 aaKnown RBP21.3■■□□□ 1
LMO4-204ENST00000495705 SMARCD1Q96GM5 515 aa21.3■■□□□ 1
LMO4-204ENST00000495705 TMEM176AQ96HP8 235 aa21.3■■□□□ 1
LMO4-204ENST00000495705 RPGRIP1Q96KN7 1286 aa21.3■■□□□ 1
LMO4-204ENST00000495705 UHRF1Q96T88 793 aaPredicted RBP21.3■■□□□ 1
LMO4-204ENST00000495705 MED10Q9BTT4 135 aa21.3■■□□□ 1
LMO4-204ENST00000495705 ZNF518BQ9C0D4 1074 aa21.3■■□□□ 1
LMO4-204ENST00000495705 VPS16Q9H269 839 aa21.3■■□□□ 1
LMO4-204ENST00000495705 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.3■■□□□ 18e-7■■■■□ 21.4
LMO4-204ENST00000495705 C5orf42Q9H799 3197 aa21.3■■□□□ 1
LMO4-204ENST00000495705 MYH10P35580 1976 aa21.3■■□□□ 1
LMO4-204ENST00000495705 DOCK8Q8NF50 2099 aa21.3■■□□□ 1
LMO4-204ENST00000495705 TTC28Q96AY4 2481 aa21.3■■□□□ 1
LMO4-204ENST00000495705 LOC730098B7Z3J9 87 aa21.29■■□□□ 1
LMO4-204ENST00000495705 FGF19O95750 216 aa21.29■■□□□ 1
LMO4-204ENST00000495705 GRIK1P39086 918 aa21.29■■□□□ 1
LMO4-204ENST00000495705 COPB1P53618 953 aaKnown RBP21.29■■□□□ 1
LMO4-204ENST00000495705 RAD23BP54727 409 aa21.29■■□□□ 1
LMO4-204ENST00000495705 TPM4P67936 248 aa21.29■■□□□ 1
LMO4-204ENST00000495705 NTHL1P78549 312 aa21.29■■□□□ 1
LMO4-204ENST00000495705 DDR2Q16832 855 aa21.29■■□□□ 1
LMO4-204ENST00000495705 SMYD5Q6GMV2 418 aa21.29■■□□□ 1
LMO4-204ENST00000495705 RRAGAQ7L523 313 aa21.29■■□□□ 1
LMO4-204ENST00000495705 GET4Q7L5D6 327 aaPredicted RBP21.29■■□□□ 1
LMO4-204ENST00000495705 DNAJB7Q7Z6W7 309 aaPredicted RBP21.29■■□□□ 1
LMO4-204ENST00000495705 FUKQ8N0W3 1084 aa21.29■■□□□ 1
LMO4-204ENST00000495705 C12orf29Q8N999 325 aa21.29■■□□□ 1
LMO4-204ENST00000495705 SLC4A11Q8NBS3 891 aa21.29■■□□□ 1
LMO4-204ENST00000495705 GIPC2Q8TF65 315 aa21.29■■□□□ 1
LMO4-204ENST00000495705 SPATA17Q96L03 361 aa21.29■■□□□ 1
LMO4-204ENST00000495705 C8orf48Q96LL4 319 aa21.29■■□□□ 1
LMO4-204ENST00000495705 UBE2TQ9NPD8 197 aaPredicted RBP21.29■■□□□ 1
LMO4-204ENST00000495705 FAM49BQ9NUQ9 324 aa21.29■■□□□ 1
LMO4-204ENST00000495705 MRPS23Q9Y3D9 190 aaKnown RBP21.29■■□□□ 1
LMO4-204ENST00000495705 GREB1Q4ZG55 1949 aa21.28■■□□□ 1
LMO4-204ENST00000495705 LRRC10BA6NIK2 292 aa21.28■■□□□ 1
LMO4-204ENST00000495705 C19orf67A6NJJ6 358 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms