RNA–Protein interactions for RNA: ENST00000495643.1

DCTN1-223, Transcript of dynactin subunit 1, human

TSL 3

Gene DCTN1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DCTN1-223	ENST00000495643	SMC2	O95347	1197 aa		11.7	□□□□□ -0.54
DCTN1-223	ENST00000495643	CSH1	P0DML2	217 aa		11.7	□□□□□ -0.54
DCTN1-223	ENST00000495643	CSH2	P0DML3	217 aa		11.7	□□□□□ -0.54
DCTN1-223	ENST00000495643	PSMC3	P17980	439 aa		11.7	□□□□□ -0.54
DCTN1-223	ENST00000495643	PTPN1	P18031	435 aa	Known RBP	11.7	□□□□□ -0.54
DCTN1-223	ENST00000495643	RPL13	P26373	211 aa	Known RBP	11.7	□□□□□ -0.54
DCTN1-223	ENST00000495643	CDC25C	P30307	473 aa		11.7	□□□□□ -0.54
DCTN1-223	ENST00000495643	PSMC2	P35998	433 aa	Known RBP	11.7	□□□□□ -0.54
DCTN1-223	ENST00000495643	VAMP7	P51809	220 aa		11.7	□□□□□ -0.54
DCTN1-223	ENST00000495643	PTPN5	P54829	565 aa		11.7	□□□□□ -0.54
DCTN1-223	ENST00000495643	CYP4F8	P98187	520 aa		11.7	□□□□□ -0.54
DCTN1-223	ENST00000495643	PRKCQ	Q04759	706 aa		11.7	□□□□□ -0.54
DCTN1-223	ENST00000495643	ENPEP	Q07075	957 aa		11.7	□□□□□ -0.54
DCTN1-223	ENST00000495643	GRM2	Q14416	872 aa		11.7	□□□□□ -0.54
DCTN1-223	ENST00000495643	MAPRE1	Q15691	268 aa	Known RBP	11.7	□□□□□ -0.54
DCTN1-223	ENST00000495643	MLF2	Q15773	248 aa	Predicted RBP	11.7	□□□□□ -0.54
DCTN1-223	ENST00000495643	SGSM1	Q2NKQ1	1148 aa		11.7	□□□□□ -0.54
DCTN1-223	ENST00000495643	ZNF699	Q32M78	642 aa		11.7	□□□□□ -0.54
DCTN1-223	ENST00000495643	GPR158	Q5T848	1215 aa		11.7	□□□□□ -0.54
DCTN1-223	ENST00000495643	C4orf50	Q6ZRC1	276 aa		11.7	□□□□□ -0.54
DCTN1-223	ENST00000495643	INTS8	Q75QN2	995 aa	Known RBP	11.7	□□□□□ -0.54
DCTN1-223	ENST00000495643	ARID3B	Q8IVW6	561 aa	Predicted RBP	11.7	□□□□□ -0.54
DCTN1-223	ENST00000495643	MFSD6L	Q8IWD5	586 aa		11.7	□□□□□ -0.54
DCTN1-223	ENST00000495643	FAM186B	Q8IYM0	893 aa		11.7	□□□□□ -0.54
DCTN1-223	ENST00000495643	OR6B3	Q8NGW1	331 aa		11.7	□□□□□ -0.54
DCTN1-223	ENST00000495643	DNASE1L2	Q92874	299 aa		11.7	□□□□□ -0.54
DCTN1-223	ENST00000495643	ERCC4	Q92889	916 aa	Predicted RBP	11.7	□□□□□ -0.54
DCTN1-223	ENST00000495643	MYLPF	Q96A32	169 aa		11.7	□□□□□ -0.54
DCTN1-223	ENST00000495643	ELMO3	Q96BJ8	720 aa		11.7	□□□□□ -0.54
DCTN1-223	ENST00000495643	TRMT2B	Q96GJ1	504 aa	Known RBP	11.7	□□□□□ -0.54
DCTN1-223	ENST00000495643	SHD	Q96IW2	340 aa		11.7	□□□□□ -0.54
DCTN1-223	ENST00000495643	MYRFL	Q96LU7	910 aa		11.7	□□□□□ -0.54
DCTN1-223	ENST00000495643	LRRC3B	Q96PB8	259 aa		11.7	□□□□□ -0.54
DCTN1-223	ENST00000495643	TRMT61B	Q9BVS5	477 aa	Known RBP	11.7	□□□□□ -0.54
DCTN1-223	ENST00000495643	DPEP3	Q9H4B8	488 aa		11.7	□□□□□ -0.54
DCTN1-223	ENST00000495643	TASP1	Q9H6P5	420 aa		11.7	□□□□□ -0.54
DCTN1-223	ENST00000495643	SMYD3	Q9H7B4	428 aa		11.7	□□□□□ -0.54
DCTN1-223	ENST00000495643	TRPV5	Q9NQA5	729 aa		11.7	□□□□□ -0.54
DCTN1-223	ENST00000495643	MAGEC2	Q9UBF1	373 aa	Predicted RBP	11.7	□□□□□ -0.54
DCTN1-223	ENST00000495643	CACNA1H	O95180	2353 aa		11.7	□□□□□ -0.54
DCTN1-223	ENST00000495643	ZNF638	Q14966	1978 aa	Known RBP	11.7	□□□□□ -0.54
DCTN1-223	ENST00000495643	KIF26A	Q9ULI4	1882 aa	Predicted RBP	11.7	□□□□□ -0.54
DCTN1-223	ENST00000495643	SLC38A8	A6NNN8	435 aa		11.69	□□□□□ -0.54
DCTN1-223	ENST00000495643	HEPACAM2	A8MVW5	462 aa		11.69	□□□□□ -0.54
DCTN1-223	ENST00000495643	ARNTL	O00327	626 aa		11.69	□□□□□ -0.54
DCTN1-223	ENST00000495643	STK25	O00506	426 aa		11.69	□□□□□ -0.54
DCTN1-223	ENST00000495643	ASS1	P00966	412 aa	Known RBP	11.69	□□□□□ -0.54
DCTN1-223	ENST00000495643	HLA-DRA	P01903	254 aa		11.69	□□□□□ -0.54
DCTN1-223	ENST00000495643	TRIM49	P0CI25	452 aa		11.69	□□□□□ -0.54
DCTN1-223	ENST00000495643	TRIM49C	P0CI26	452 aa		11.69	□□□□□ -0.54
DCTN1-223	ENST00000495643	BDNF	P23560	247 aa		11.69	□□□□□ -0.54
DCTN1-223	ENST00000495643	CDH8	P55286	799 aa		11.69	□□□□□ -0.54
DCTN1-223	ENST00000495643	PPP3CA	Q08209	521 aa		11.69	□□□□□ -0.54
DCTN1-223	ENST00000495643	FCHO2	Q0JRZ9	810 aa		11.69	□□□□□ -0.54
DCTN1-223	ENST00000495643	ARHGAP15	Q53QZ3	475 aa		11.69	□□□□□ -0.54
DCTN1-223	ENST00000495643	ZNF667	Q5HYK9	610 aa		11.69	□□□□□ -0.54
DCTN1-223	ENST00000495643	MDH1B	Q5I0G3	518 aa		11.69	□□□□□ -0.54
DCTN1-223	ENST00000495643	VSTM1	Q6UX27	236 aa		11.69	□□□□□ -0.54
DCTN1-223	ENST00000495643	GPIHBP1	Q8IV16	184 aa		11.69	□□□□□ -0.54
DCTN1-223	ENST00000495643	SCN4B	Q8IWT1	228 aa		11.69	□□□□□ -0.54
DCTN1-223	ENST00000495643	CCDC105	Q8IYK2	499 aa		11.69	□□□□□ -0.54
DCTN1-223	ENST00000495643	DEPDC1B	Q8WUY9	529 aa		11.69	□□□□□ -0.54
DCTN1-223	ENST00000495643	TAF4B	Q92750	862 aa		11.69	□□□□□ -0.54
DCTN1-223	ENST00000495643	IRF7	Q92985	503 aa		11.69	□□□□□ -0.54
DCTN1-223	ENST00000495643	SMARCE1	Q969G3	411 aa		11.69	□□□□□ -0.54
DCTN1-223	ENST00000495643	PCED1B	Q96HM7	432 aa		11.69	□□□□□ -0.54
DCTN1-223	ENST00000495643	SPATA17	Q96L03	361 aa		11.69	□□□□□ -0.54
DCTN1-223	ENST00000495643	SLC46A2	Q9BY10	475 aa		11.69	□□□□□ -0.54
DCTN1-223	ENST00000495643	GTPBP4	Q9BZE4	634 aa	Known RBP	11.69	□□□□□ -0.54
DCTN1-223	ENST00000495643	FOXQ1	Q9C009	403 aa		11.69	□□□□□ -0.54
DCTN1-223	ENST00000495643	SDCBP2	Q9H190	292 aa		11.69	□□□□□ -0.54
DCTN1-223	ENST00000495643	BRD9	Q9H8M2	597 aa		11.69	□□□□□ -0.54
DCTN1-223	ENST00000495643	DLGAP2	Q9P1A6	1054 aa		11.69	□□□□□ -0.54
DCTN1-223	ENST00000495643	ZMYM5	Q9UJ78	669 aa		11.69	□□□□□ -0.54
DCTN1-223	ENST00000495643	HOOK1	Q9UJC3	728 aa	Known RBP	11.69	□□□□□ -0.54
DCTN1-223	ENST00000495643	MAGED2	Q9UNF1	606 aa	Predicted RBP	11.69	□□□□□ -0.54
DCTN1-223	ENST00000495643	SIT1	Q9Y3P8	196 aa		11.69	□□□□□ -0.54
DCTN1-223	ENST00000495643	KANSL1L	A0AUZ9	987 aa		11.68	□□□□□ -0.54
DCTN1-223	ENST00000495643	SOBP	A7XYQ1	873 aa		11.68	□□□□□ -0.54
DCTN1-223	ENST00000495643	TADA3	O75528	432 aa		11.68	□□□□□ -0.54
DCTN1-223	ENST00000495643	PRAMEF12	O95522	483 aa		11.68	□□□□□ -0.54
DCTN1-223	ENST00000495643	KRT13	P13646	458 aa		11.68	□□□□□ -0.54
DCTN1-223	ENST00000495643	GLUL	P15104	373 aa		11.68	□□□□□ -0.54
DCTN1-223	ENST00000495643	DDX6	P26196	483 aa	Known RBP eCLIP	11.68	□□□□□ -0.54	5e-6	■■■■■ 46.6
DCTN1-223	ENST00000495643	GDI1	P31150	447 aa		11.68	□□□□□ -0.54
DCTN1-223	ENST00000495643	RAP1GAP	P47736	663 aa		11.68	□□□□□ -0.54
DCTN1-223	ENST00000495643	GCLM	P48507	274 aa		11.68	□□□□□ -0.54
DCTN1-223	ENST00000495643	CYP27A1	Q02318	531 aa		11.68	□□□□□ -0.54
DCTN1-223	ENST00000495643	ZC3H3	Q8IXZ2	948 aa	Known RBP	11.68	□□□□□ -0.54
DCTN1-223	ENST00000495643	CMTM8	Q8IZV2	173 aa		11.68	□□□□□ -0.54
DCTN1-223	ENST00000495643	ADSSL1	Q8N142	457 aa		11.68	□□□□□ -0.54
DCTN1-223	ENST00000495643	MAB21L3	Q8N8X9	362 aa		11.68	□□□□□ -0.54
DCTN1-223	ENST00000495643	DTWD2	Q8NBA8	298 aa		11.68	□□□□□ -0.54
DCTN1-223	ENST00000495643	B3GALNT2	Q8NCR0	500 aa		11.68	□□□□□ -0.54
DCTN1-223	ENST00000495643	PJA1	Q8NG27	643 aa		11.68	□□□□□ -0.54
DCTN1-223	ENST00000495643	EEF2KMT	Q96G04	330 aa		11.68	□□□□□ -0.54
DCTN1-223	ENST00000495643	CEP295NL	Q96MC4	621 aa		11.68	□□□□□ -0.54
DCTN1-223	ENST00000495643	GCNA	Q96QF7	691 aa		11.68	□□□□□ -0.54
DCTN1-223	ENST00000495643	B3GNT5	Q9BYG0	378 aa		11.68	□□□□□ -0.54
DCTN1-223	ENST00000495643	HEBP1	Q9NRV9	189 aa		11.68	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms