RNA–Protein interactions for RNA: ENST00000495561.1

SRRM1-219, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-219ENST00000495561 KLHL22Q53GT1 634 aa5.34□□□□□ -1.55
SRRM1-219ENST00000495561 TRIM72Q6ZMU5 477 aa5.34□□□□□ -1.55
SRRM1-219ENST00000495561 HEATR3Q7Z4Q2 680 aa5.34□□□□□ -1.55
SRRM1-219ENST00000495561 KRT73Q86Y46 540 aa5.34□□□□□ -1.55
SRRM1-219ENST00000495561 LRRC71Q8N4P6 559 aa5.34□□□□□ -1.55
SRRM1-219ENST00000495561 RITA1Q96K30 269 aa5.34□□□□□ -1.55
SRRM1-219ENST00000495561 SLC46A1Q96NT5 459 aa5.34□□□□□ -1.55
SRRM1-219ENST00000495561 TMEM79Q9BSE2 394 aa5.34□□□□□ -1.55
SRRM1-219ENST00000495561 CCDC8Q9H0W5 538 aaPredicted RBP5.34□□□□□ -1.55
SRRM1-219ENST00000495561 TMX1Q9H3N1 280 aa5.34□□□□□ -1.55
SRRM1-219ENST00000495561 HESX1Q9UBX0 185 aa5.34□□□□□ -1.55
SRRM1-219ENST00000495561 ABCF2Q9UG63 623 aa5.34□□□□□ -1.55
SRRM1-219ENST00000495561 SSX2IPQ9Y2D8 614 aa5.34□□□□□ -1.55
SRRM1-219ENST00000495561 FESP07332 822 aa5.33□□□□□ -1.56
SRRM1-219ENST00000495561 PIM1P11309 404 aaPredicted RBP5.33□□□□□ -1.56
SRRM1-219ENST00000495561 POLGP54098 1239 aaPredicted RBP5.33□□□□□ -1.56
SRRM1-219ENST00000495561 PDE1AP54750 535 aa5.33□□□□□ -1.56
SRRM1-219ENST00000495561 PXDC1Q5TGL8 231 aa5.33□□□□□ -1.56
SRRM1-219ENST00000495561 PNMA8AQ86V59 439 aaPredicted RBP5.33□□□□□ -1.56
SRRM1-219ENST00000495561 CPA6Q8N4T0 437 aa5.33□□□□□ -1.56
SRRM1-219ENST00000495561 ATG4AQ8WYN0 398 aa5.33□□□□□ -1.56
SRRM1-219ENST00000495561 TTYH3Q9C0H2 523 aa5.33□□□□□ -1.56
SRRM1-219ENST00000495561 FEZ2Q9UHY8 353 aaPredicted RBP5.33□□□□□ -1.56
SRRM1-219ENST00000495561 ATP8A1Q9Y2Q0 1164 aa5.33□□□□□ -1.56
SRRM1-219ENST00000495561 BCAR3O75815 825 aa5.32□□□□□ -1.56
SRRM1-219ENST00000495561 AHSGP02765 367 aa5.32□□□□□ -1.56
SRRM1-219ENST00000495561 NPSP0C0P6 89 aa5.32□□□□□ -1.56
SRRM1-219ENST00000495561 PPIFP30405 207 aaKnown RBP5.32□□□□□ -1.56
SRRM1-219ENST00000495561 CCKBRP32239 447 aa5.32□□□□□ -1.56
SRRM1-219ENST00000495561 PLCD1P51178 756 aa5.32□□□□□ -1.56
SRRM1-219ENST00000495561 HK3P52790 923 aa5.32□□□□□ -1.56
SRRM1-219ENST00000495561 LOXL3P58215 753 aa5.32□□□□□ -1.56
SRRM1-219ENST00000495561 ITKQ08881 620 aa5.32□□□□□ -1.56
SRRM1-219ENST00000495561 Q4G0T1 1027 aa5.32□□□□□ -1.56
SRRM1-219ENST00000495561 PARS2Q7L3T8 475 aaKnown RBP5.32□□□□□ -1.56
SRRM1-219ENST00000495561 PPP1R3BQ86XI6 285 aa5.32□□□□□ -1.56
SRRM1-219ENST00000495561 RP9Q8TA86 221 aaKnown RBP5.32□□□□□ -1.56
SRRM1-219ENST00000495561 WDR17Q8IZU2 1322 aa5.31□□□□□ -1.56
SRRM1-219ENST00000495561 E5RJQ4 531 aa5.31□□□□□ -1.56
SRRM1-219ENST00000495561 SLC16A6O15403 523 aa5.31□□□□□ -1.56
SRRM1-219ENST00000495561 INSIG1O15503 277 aa5.31□□□□□ -1.56
SRRM1-219ENST00000495561 ZRANB2O95218 330 aaKnown RBP eCLIP5.31□□□□□ -1.562e-15■□□□□ 10.6
SRRM1-219ENST00000495561 ATXN1LP0C7T5 689 aaKnown RBP5.31□□□□□ -1.56
SRRM1-219ENST00000495561 KRTAP10-6P60371 365 aaPredicted RBP5.31□□□□□ -1.56
SRRM1-219ENST00000495561 TRIP6Q15654 476 aaKnown RBP5.31□□□□□ -1.56
SRRM1-219ENST00000495561 LONRF3Q496Y0 759 aa5.31□□□□□ -1.56
SRRM1-219ENST00000495561 THEMIS2Q5TEJ8 643 aa5.31□□□□□ -1.56
SRRM1-219ENST00000495561 ARHGAP40Q5TG30 622 aa5.31□□□□□ -1.56
SRRM1-219ENST00000495561 RUSC1-AS1Q66K80 236 aa5.31□□□□□ -1.56
SRRM1-219ENST00000495561 FCRL6Q6DN72 434 aa5.31□□□□□ -1.56
SRRM1-219ENST00000495561 MIS18BP1Q6P0N0 1132 aa5.31□□□□□ -1.56
SRRM1-219ENST00000495561 LAYNQ6UX15 382 aa5.31□□□□□ -1.56
SRRM1-219ENST00000495561 GLG1Q92896 1179 aa5.31□□□□□ -1.56
SRRM1-219ENST00000495561 R3HDM4Q96D70 268 aa5.31□□□□□ -1.56
SRRM1-219ENST00000495561 MTMR8Q96EF0 704 aa5.31□□□□□ -1.56
SRRM1-219ENST00000495561 DAZAP1Q96EP5 407 aaKnown RBP5.31□□□□□ -1.56
SRRM1-219ENST00000495561 PTDSS2Q9BVG9 487 aa5.31□□□□□ -1.56
SRRM1-219ENST00000495561 GLOD4Q9HC38 313 aa5.31□□□□□ -1.56
SRRM1-219ENST00000495561 USP35Q9P2H5 1018 aa5.31□□□□□ -1.56
SRRM1-219ENST00000495561 ZNF580Q9UK33 172 aa5.31□□□□□ -1.56
SRRM1-219ENST00000495561 AFG3L2Q9Y4W6 797 aa5.31□□□□□ -1.56
SRRM1-219ENST00000495561 A1L4Q6 167 aa5.3□□□□□ -1.56
SRRM1-219ENST00000495561 H7C1Q1 480 aa5.3□□□□□ -1.56
SRRM1-219ENST00000495561 GUCY2FP51841 1108 aa5.3□□□□□ -1.56
SRRM1-219ENST00000495561 LILRA4P59901 499 aa5.3□□□□□ -1.56
SRRM1-219ENST00000495561 GTF2H3Q13889 308 aa5.3□□□□□ -1.56
SRRM1-219ENST00000495561 RAPGEF1Q13905 1077 aa5.3□□□□□ -1.56
SRRM1-219ENST00000495561 LRRC41Q15345 812 aa5.3□□□□□ -1.56
SRRM1-219ENST00000495561 KIRREL2Q6UWL6 708 aa5.3□□□□□ -1.56
SRRM1-219ENST00000495561 Q6ZWC4 215 aa5.3□□□□□ -1.56
SRRM1-219ENST00000495561 SAMD14Q8IZD0 417 aaPredicted RBP5.3□□□□□ -1.56
SRRM1-219ENST00000495561 MIER2Q8N344 545 aa5.3□□□□□ -1.56
SRRM1-219ENST00000495561 PRSS3P2Q8NHM4 247 aa5.3□□□□□ -1.56
SRRM1-219ENST00000495561 ZC3H10Q96K80 434 aaKnown RBP5.3□□□□□ -1.56
SRRM1-219ENST00000495561 TRNAU1APQ9NX07 287 aaKnown RBP5.3□□□□□ -1.56
SRRM1-219ENST00000495561 KLHL13Q9P2N7 655 aa5.3□□□□□ -1.56
SRRM1-219ENST00000495561 POC1B-GALNT4F8VUJ3 575 aa5.29□□□□□ -1.56
SRRM1-219ENST00000495561 ERC2O15083 957 aa5.29□□□□□ -1.56
SRRM1-219ENST00000495561 KATNA1O75449 491 aa5.29□□□□□ -1.56
SRRM1-219ENST00000495561 TJP3O95049 919 aa5.29□□□□□ -1.56
SRRM1-219ENST00000495561 FTLP02792 175 aaPredicted RBP5.29□□□□□ -1.56
SRRM1-219ENST00000495561 CBSLP0DN79 551 aa5.29□□□□□ -1.56
SRRM1-219ENST00000495561 SNHG28P0DPA3 235 aa5.29□□□□□ -1.56
SRRM1-219ENST00000495561 TYRP14679 529 aa5.29□□□□□ -1.56
SRRM1-219ENST00000495561 TKTP29401 623 aaKnown RBP5.29□□□□□ -1.56
SRRM1-219ENST00000495561 CBSP35520 551 aa5.29□□□□□ -1.56
SRRM1-219ENST00000495561 PXNP49023 591 aaPredicted RBP5.29□□□□□ -1.56
SRRM1-219ENST00000495561 EXOSC9Q06265 439 aaKnown RBP5.29□□□□□ -1.56
SRRM1-219ENST00000495561 IQCB1Q15051 598 aa5.29□□□□□ -1.56
SRRM1-219ENST00000495561 PTPN21Q16825 1174 aa5.29□□□□□ -1.56
SRRM1-219ENST00000495561 EGFLAMQ63HQ2 1017 aa5.29□□□□□ -1.56
SRRM1-219ENST00000495561 RGS7BPQ6MZT1 257 aaPredicted RBP5.29□□□□□ -1.56
SRRM1-219ENST00000495561 GALNT4Q8N4A0 578 aa5.29□□□□□ -1.56
SRRM1-219ENST00000495561 NANOGP1Q8N7R0 232 aa5.29□□□□□ -1.56
SRRM1-219ENST00000495561 THAP7Q9BT49 309 aaPredicted RBP5.29□□□□□ -1.56
SRRM1-219ENST00000495561 ADGRE3Q9BY15 652 aa5.29□□□□□ -1.56
SRRM1-219ENST00000495561 SLC13A1Q9BZW2 595 aa5.29□□□□□ -1.56
SRRM1-219ENST00000495561 LMBRD1Q9NUN5 540 aa5.29□□□□□ -1.56
SRRM1-219ENST00000495561 PCDHA1Q9Y5I3 950 aa5.29□□□□□ -1.56
SRRM1-219ENST00000495561 H3BNC9 293 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms