RNA–Protein interactions for RNA: ENST00000494913.5

COL20A1-207, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 2

Gene COL20A1, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-207ENST00000494913 CYP27A1Q02318 531 aa19.22■□□□□ 0.67
COL20A1-207ENST00000494913 ZCWPW2Q504Y3 356 aa19.22■□□□□ 0.67
COL20A1-207ENST00000494913 ZNF667Q5HYK9 610 aa19.22■□□□□ 0.67
COL20A1-207ENST00000494913 C1orf220Q5T0J3 134 aa19.22■□□□□ 0.67
COL20A1-207ENST00000494913 SV2AQ7L0J3 742 aa19.22■□□□□ 0.67
COL20A1-207ENST00000494913 MFSD6LQ8IWD5 586 aa19.22■□□□□ 0.67
COL20A1-207ENST00000494913 FAM186BQ8IYM0 893 aa19.22■□□□□ 0.67
COL20A1-207ENST00000494913 MYCBPAPQ8TBZ2 947 aa19.22■□□□□ 0.67
COL20A1-207ENST00000494913 SMARCE1Q969G3 411 aa19.22■□□□□ 0.67
COL20A1-207ENST00000494913 MYLPFQ96A32 169 aa19.22■□□□□ 0.67
COL20A1-207ENST00000494913 E2F7Q96AV8 911 aa19.22■□□□□ 0.67
COL20A1-207ENST00000494913 RSPRY1Q96DX4 576 aa19.22■□□□□ 0.67
COL20A1-207ENST00000494913 FOXQ1Q9C009 403 aa19.22■□□□□ 0.67
COL20A1-207ENST00000494913 TASP1Q9H6P5 420 aa19.22■□□□□ 0.67
COL20A1-207ENST00000494913 VRTNQ9H8Y1 702 aa19.22■□□□□ 0.67
COL20A1-207ENST00000494913 CHMP5Q9NZZ3 219 aa19.22■□□□□ 0.67
COL20A1-207ENST00000494913 SIT1Q9Y3P8 196 aa19.22■□□□□ 0.67
COL20A1-207ENST00000494913 NME7Q9Y5B8 376 aa19.22■□□□□ 0.67
COL20A1-207ENST00000494913 A8MXQ7 604 aa19.21■□□□□ 0.67
COL20A1-207ENST00000494913 H0Y858 1186 aa19.21■□□□□ 0.67
COL20A1-207ENST00000494913 KRT13P13646 458 aa19.21■□□□□ 0.67
COL20A1-207ENST00000494913 BDNFP23560 247 aa19.21■□□□□ 0.67
COL20A1-207ENST00000494913 PSMC2P35998 433 aaKnown RBP19.21■□□□□ 0.67
COL20A1-207ENST00000494913 PRCPP42785 496 aa19.21■□□□□ 0.67
COL20A1-207ENST00000494913 MAGEA11P43364 429 aa19.21■□□□□ 0.67
COL20A1-207ENST00000494913 CDH8P55286 799 aa19.21■□□□□ 0.67
COL20A1-207ENST00000494913 NLRP12P59046 1061 aa19.21■□□□□ 0.67
COL20A1-207ENST00000494913 PRKCQQ04759 706 aa19.21■□□□□ 0.67
COL20A1-207ENST00000494913 SGSM1Q2NKQ1 1148 aa19.21■□□□□ 0.67
COL20A1-207ENST00000494913 ZACNQ401N2 412 aa19.21■□□□□ 0.67
COL20A1-207ENST00000494913 MDH1BQ5I0G3 518 aa19.21■□□□□ 0.67
COL20A1-207ENST00000494913 ZNF658Q5TYW1 1059 aaPredicted RBP19.21■□□□□ 0.67
COL20A1-207ENST00000494913 INTS8Q75QN2 995 aaKnown RBP19.21■□□□□ 0.67
COL20A1-207ENST00000494913 TMEM150AQ86TG1 271 aa19.21■□□□□ 0.67
COL20A1-207ENST00000494913 DEPDC1BQ8WUY9 529 aa19.21■□□□□ 0.67
COL20A1-207ENST00000494913 EEF2KMTQ96G04 330 aa19.21■□□□□ 0.67
COL20A1-207ENST00000494913 PCED1BQ96HM7 432 aa19.21■□□□□ 0.67
COL20A1-207ENST00000494913 SMYD3Q9H7B4 428 aa19.21■□□□□ 0.67
COL20A1-207ENST00000494913 HEBP1Q9NRV9 189 aa19.21■□□□□ 0.67
COL20A1-207ENST00000494913 NCANO14594 1321 aa19.21■□□□□ 0.67
COL20A1-207ENST00000494913 SLC38A8A6NNN8 435 aa19.2■□□□□ 0.66
COL20A1-207ENST00000494913 DPYSL4O14531 572 aa19.2■□□□□ 0.66
COL20A1-207ENST00000494913 GADD45BO75293 160 aaPredicted RBP19.2■□□□□ 0.66
COL20A1-207ENST00000494913 F11P03951 625 aa19.2■□□□□ 0.66
COL20A1-207ENST00000494913 DCNP07585 359 aaKnown RBP19.2■□□□□ 0.66
COL20A1-207ENST00000494913 TRIM49P0CI25 452 aa19.2■□□□□ 0.66
COL20A1-207ENST00000494913 TRIM49CP0CI26 452 aa19.2■□□□□ 0.66
COL20A1-207ENST00000494913 PTPN1P18031 435 aaKnown RBP19.2■□□□□ 0.66
COL20A1-207ENST00000494913 CD72P21854 359 aa19.2■□□□□ 0.66
COL20A1-207ENST00000494913 GRIK1P39086 918 aa19.2■□□□□ 0.66
COL20A1-207ENST00000494913 RAP1GAPP47736 663 aa19.2■□□□□ 0.66
COL20A1-207ENST00000494913 EDRF1Q3B7T1 1238 aa19.2■□□□□ 0.66
COL20A1-207ENST00000494913 YAF2Q8IY57 180 aa19.2■□□□□ 0.66
COL20A1-207ENST00000494913 DTWD2Q8NBA8 298 aa19.2■□□□□ 0.66
COL20A1-207ENST00000494913 SPATA20Q8TB22 786 aa19.2■□□□□ 0.66
COL20A1-207ENST00000494913 IRF7Q92985 503 aa19.2■□□□□ 0.66
COL20A1-207ENST00000494913 DDX23Q9BUQ8 820 aaKnown RBP19.2■□□□□ 0.66
COL20A1-207ENST00000494913 SLC46A2Q9BY10 475 aa19.2■□□□□ 0.66
COL20A1-207ENST00000494913 DPEP3Q9H4B8 488 aa19.2■□□□□ 0.66
COL20A1-207ENST00000494913 KANSL1LA0AUZ9 987 aa19.19■□□□□ 0.66
COL20A1-207ENST00000494913 ZNF263O14978 683 aa19.19■□□□□ 0.66
COL20A1-207ENST00000494913 GCLMP48507 274 aa19.19■□□□□ 0.66
COL20A1-207ENST00000494913 VSTM1Q6UX27 236 aa19.19■□□□□ 0.66
COL20A1-207ENST00000494913 SCARA5Q6ZMJ2 495 aa19.19■□□□□ 0.66
COL20A1-207ENST00000494913 TPRG1Q6ZUI0 275 aa19.19■□□□□ 0.66
COL20A1-207ENST00000494913 CCDC105Q8IYK2 499 aa19.19■□□□□ 0.66
COL20A1-207ENST00000494913 MAB21L3Q8N8X9 362 aa19.19■□□□□ 0.66
COL20A1-207ENST00000494913 PJA1Q8NG27 643 aa19.19■□□□□ 0.66
COL20A1-207ENST00000494913 DNASE1L2Q92874 299 aa19.19■□□□□ 0.66
COL20A1-207ENST00000494913 UXTQ9UBK9 157 aaPredicted RBP19.19■□□□□ 0.66
COL20A1-207ENST00000494913 KINO60870 393 aaKnown RBP19.18■□□□□ 0.66
COL20A1-207ENST00000494913 NOL4O94818 638 aa19.18■□□□□ 0.66
COL20A1-207ENST00000494913 HLA-DRAP01903 254 aa19.18■□□□□ 0.66
COL20A1-207ENST00000494913 P4HA1P13674 534 aa19.18■□□□□ 0.66
COL20A1-207ENST00000494913 PIK3CAP42336 1068 aa19.18■□□□□ 0.66
COL20A1-207ENST00000494913 PPP3CAQ08209 521 aa19.18■□□□□ 0.66
COL20A1-207ENST00000494913 UBXN2BQ14CS0 331 aa19.18■□□□□ 0.66
COL20A1-207ENST00000494913 TXNDC8Q6A555 127 aa19.18■□□□□ 0.66
COL20A1-207ENST00000494913 CMTM8Q8IZV2 173 aa19.18■□□□□ 0.66
COL20A1-207ENST00000494913 TAF4BQ92750 862 aa19.18■□□□□ 0.66
COL20A1-207ENST00000494913 ATOH1Q92858 354 aaPredicted RBP19.18■□□□□ 0.66
COL20A1-207ENST00000494913 TRMT2BQ96GJ1 504 aaKnown RBP19.18■□□□□ 0.66
COL20A1-207ENST00000494913 MYRFLQ96LU7 910 aa19.18■□□□□ 0.66
COL20A1-207ENST00000494913 LRRC3BQ96PB8 259 aa19.18■□□□□ 0.66
COL20A1-207ENST00000494913 SMG9Q9H0W8 520 aaKnown RBP19.18■□□□□ 0.66
COL20A1-207ENST00000494913 SDCBP2Q9H190 292 aa19.18■□□□□ 0.66
COL20A1-207ENST00000494913 IRF2BPLQ9H1B7 796 aa19.18■□□□□ 0.66
COL20A1-207ENST00000494913 MMRN2Q9H8L6 949 aa19.18■□□□□ 0.66
COL20A1-207ENST00000494913 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.18■□□□□ 0.66
COL20A1-207ENST00000494913 MTF2Q9Y483 593 aaPredicted RBP19.18■□□□□ 0.66
COL20A1-207ENST00000494913 PIEZO1Q92508 2521 aa19.18■□□□□ 0.66
COL20A1-207ENST00000494913 COL4A3Q01955 1670 aa19.17■□□□□ 0.66
COL20A1-207ENST00000494913 FAM170BA6NMN3 283 aa19.17■□□□□ 0.66
COL20A1-207ENST00000494913 CETN3O15182 167 aa19.17■□□□□ 0.66
COL20A1-207ENST00000494913 LRRN2O75325 713 aa19.17■□□□□ 0.66
COL20A1-207ENST00000494913 PRAMEF12O95522 483 aa19.17■□□□□ 0.66
COL20A1-207ENST00000494913 ASS1P00966 412 aaKnown RBP19.17■□□□□ 0.66
COL20A1-207ENST00000494913 WEE1P30291 646 aa19.17■□□□□ 0.66
COL20A1-207ENST00000494913 COBLL1Q53SF7 1204 aa19.17■□□□□ 0.66
COL20A1-207ENST00000494913 ISM2Q6H9L7 571 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms