RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, human

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VTI1A-208	ENST00000494728	KLRC4	O43908	158 aa		12.49	□□□□□ -0.41
VTI1A-208	ENST00000494728	NOL4	O94818	638 aa		12.49	□□□□□ -0.41
VTI1A-208	ENST00000494728	DLAT	P10515	647 aa	Known RBP	12.49	□□□□□ -0.41
VTI1A-208	ENST00000494728	WEE1	P30291	646 aa		12.49	□□□□□ -0.41
VTI1A-208	ENST00000494728	CDC25C	P30307	473 aa		12.49	□□□□□ -0.41
VTI1A-208	ENST00000494728	AFM	P43652	599 aa		12.49	□□□□□ -0.41
VTI1A-208	ENST00000494728	ME1	P48163	572 aa		12.49	□□□□□ -0.41
VTI1A-208	ENST00000494728	CYP2J2	P51589	502 aa		12.49	□□□□□ -0.41
VTI1A-208	ENST00000494728	RBP5	P82980	135 aa		12.49	□□□□□ -0.41
VTI1A-208	ENST00000494728	SMARCB1	Q12824	385 aa		12.49	□□□□□ -0.41
VTI1A-208	ENST00000494728	NFE2	Q16621	373 aa	Predicted RBP	12.49	□□□□□ -0.41
VTI1A-208	ENST00000494728	BMT2	Q1RMZ1	405 aa		12.49	□□□□□ -0.41
VTI1A-208	ENST00000494728	ARHGAP15	Q53QZ3	475 aa		12.49	□□□□□ -0.41
VTI1A-208	ENST00000494728	PKN3	Q6P5Z2	889 aa		12.49	□□□□□ -0.41
VTI1A-208	ENST00000494728	TRAPPC11	Q7Z392	1133 aa		12.49	□□□□□ -0.41
VTI1A-208	ENST00000494728	WDR49	Q8IV35	697 aa		12.49	□□□□□ -0.41
VTI1A-208	ENST00000494728	YAF2	Q8IY57	180 aa		12.49	□□□□□ -0.41
VTI1A-208	ENST00000494728	TMEM86A	Q8N2M4	240 aa		12.49	□□□□□ -0.41
VTI1A-208	ENST00000494728	RDH13	Q8NBN7	331 aa		12.49	□□□□□ -0.41
VTI1A-208	ENST00000494728	KIAA0895	Q8NCT3	520 aa		12.49	□□□□□ -0.41
VTI1A-208	ENST00000494728	BPIFB1	Q8TDL5	484 aa		12.49	□□□□□ -0.41
VTI1A-208	ENST00000494728	ZNF516	Q92618	1163 aa		12.49	□□□□□ -0.41
VTI1A-208	ENST00000494728	MYLPF	Q96A32	169 aa		12.49	□□□□□ -0.41
VTI1A-208	ENST00000494728	E2F7	Q96AV8	911 aa		12.49	□□□□□ -0.41
VTI1A-208	ENST00000494728	ELMO3	Q96BJ8	720 aa		12.49	□□□□□ -0.41
VTI1A-208	ENST00000494728	HPDL	Q96IR7	371 aa		12.49	□□□□□ -0.41
VTI1A-208	ENST00000494728	ANKRD36BP1	Q96IX9	119 aa		12.49	□□□□□ -0.41
VTI1A-208	ENST00000494728	MRPL45	Q9BRJ2	306 aa	Known RBP	12.49	□□□□□ -0.41
VTI1A-208	ENST00000494728	SEMA4A	Q9H3S1	761 aa		12.49	□□□□□ -0.41
VTI1A-208	ENST00000494728	SLC39A2	Q9NP94	309 aa		12.49	□□□□□ -0.41
VTI1A-208	ENST00000494728	TMEM30A	Q9NV96	361 aa		12.49	□□□□□ -0.41
VTI1A-208	ENST00000494728	PCDHGA2	Q9Y5H1	932 aa		12.49	□□□□□ -0.41
VTI1A-208	ENST00000494728	EPG5	Q9HCE0	2579 aa		12.49	□□□□□ -0.41
VTI1A-208	ENST00000494728	CNOT1	A5YKK6	2376 aa	Known RBP	12.49	□□□□□ -0.41
VTI1A-208	ENST00000494728	DPYSL4	O14531	572 aa		12.48	□□□□□ -0.41
VTI1A-208	ENST00000494728	NCAM2	O15394	837 aa		12.48	□□□□□ -0.41
VTI1A-208	ENST00000494728	KIN	O60870	393 aa	Known RBP	12.48	□□□□□ -0.41
VTI1A-208	ENST00000494728	FGF19	O95750	216 aa		12.48	□□□□□ -0.41
VTI1A-208	ENST00000494728	CST3	P01034	146 aa	Predicted RBP	12.48	□□□□□ -0.41
VTI1A-208	ENST00000494728	CASP4	P49662	377 aa		12.48	□□□□□ -0.41
VTI1A-208	ENST00000494728	KPNA1	P52294	538 aa	Predicted RBP	12.48	□□□□□ -0.41
VTI1A-208	ENST00000494728	USP46	P62068	366 aa		12.48	□□□□□ -0.41
VTI1A-208	ENST00000494728	MYL7	Q01449	175 aa		12.48	□□□□□ -0.41
VTI1A-208	ENST00000494728	CYP24A1	Q07973	514 aa		12.48	□□□□□ -0.41
VTI1A-208	ENST00000494728	CCIN	Q13939	588 aa		12.48	□□□□□ -0.41
VTI1A-208	ENST00000494728	PON2	Q15165	354 aa		12.48	□□□□□ -0.41
VTI1A-208	ENST00000494728	TAF12	Q16514	161 aa		12.48	□□□□□ -0.41
VTI1A-208	ENST00000494728	CFAP221	Q4G0U5	840 aa		12.48	□□□□□ -0.41
VTI1A-208	ENST00000494728	ARHGAP29	Q52LW3	1261 aa		12.48	□□□□□ -0.41
VTI1A-208	ENST00000494728	FAM171B	Q6P995	826 aa		12.48	□□□□□ -0.41
VTI1A-208	ENST00000494728	CSGALNACT1	Q8TDX6	532 aa		12.48	□□□□□ -0.41
VTI1A-208	ENST00000494728	CCDC127	Q96BQ5	260 aa		12.48	□□□□□ -0.41
VTI1A-208	ENST00000494728	GCNA	Q96QF7	691 aa		12.48	□□□□□ -0.41
VTI1A-208	ENST00000494728	CGRRF1	Q99675	332 aa		12.48	□□□□□ -0.41
VTI1A-208	ENST00000494728	FAM83C	Q9BQN1	747 aa		12.48	□□□□□ -0.41
VTI1A-208	ENST00000494728	SYT15	Q9BQS2	421 aa		12.48	□□□□□ -0.41
VTI1A-208	ENST00000494728	EPC1	Q9H2F5	836 aa		12.48	□□□□□ -0.41
VTI1A-208	ENST00000494728	ABCB6	Q9NP58	842 aa		12.48	□□□□□ -0.41
VTI1A-208	ENST00000494728	ZSCAN32	Q9NX65	697 aa		12.48	□□□□□ -0.41
VTI1A-208	ENST00000494728	OBP2A	Q9NY56	170 aa		12.48	□□□□□ -0.41
VTI1A-208	ENST00000494728	SERTAD1	Q9UHV2	236 aa		12.48	□□□□□ -0.41
VTI1A-208	ENST00000494728	SMG5	Q9UPR3	1016 aa	Known RBP	12.48	□□□□□ -0.41
VTI1A-208	ENST00000494728	ZDHHC9	Q9Y397	364 aa		12.48	□□□□□ -0.41
VTI1A-208	ENST00000494728	CEP295	Q9C0D2	2601 aa		12.48	□□□□□ -0.41
VTI1A-208	ENST00000494728		K7ESF4	209 aa		12.47	□□□□□ -0.41
VTI1A-208	ENST00000494728	KIAA0391	O15091	583 aa	Known RBP	12.47	□□□□□ -0.41
VTI1A-208	ENST00000494728	TNNC2	P02585	160 aa		12.47	□□□□□ -0.41
VTI1A-208	ENST00000494728	ARSA	P15289	507 aa		12.47	□□□□□ -0.41
VTI1A-208	ENST00000494728	CACNA2D1	P54289	1103 aa		12.47	□□□□□ -0.41
VTI1A-208	ENST00000494728	MLLT6	P55198	1093 aa	Predicted RBP	12.47	□□□□□ -0.41
VTI1A-208	ENST00000494728	SRSF5	Q13243	272 aa	Known RBP	12.47	□□□□□ -0.41
VTI1A-208	ENST00000494728	PSMD6	Q15008	389 aa		12.47	□□□□□ -0.41
VTI1A-208	ENST00000494728	DUOXA2	Q1HG44	320 aa		12.47	□□□□□ -0.41
VTI1A-208	ENST00000494728	STXBP4	Q6ZWJ1	553 aa		12.47	□□□□□ -0.41
VTI1A-208	ENST00000494728	SPATA2L	Q8IUW3	424 aa	Predicted RBP	12.47	□□□□□ -0.41
VTI1A-208	ENST00000494728	SCN4B	Q8IWT1	228 aa		12.47	□□□□□ -0.41
VTI1A-208	ENST00000494728	CELF5	Q8N6W0	485 aa	Known RBP	12.47	□□□□□ -0.41
VTI1A-208	ENST00000494728	SPATA18	Q8TC71	538 aa		12.47	□□□□□ -0.41
VTI1A-208	ENST00000494728	RUBCN	Q92622	972 aa		12.47	□□□□□ -0.41
VTI1A-208	ENST00000494728	RMDN1	Q96DB5	314 aa		12.47	□□□□□ -0.41
VTI1A-208	ENST00000494728	TRMT2B	Q96GJ1	504 aa	Known RBP	12.47	□□□□□ -0.41
VTI1A-208	ENST00000494728	MYRFL	Q96LU7	910 aa		12.47	□□□□□ -0.41
VTI1A-208	ENST00000494728	HINFP	Q9BQA5	517 aa		12.47	□□□□□ -0.41
VTI1A-208	ENST00000494728	LRRC27	Q9C0I9	530 aa		12.47	□□□□□ -0.41
VTI1A-208	ENST00000494728	XYLT2	Q9H1B5	865 aa		12.47	□□□□□ -0.41
VTI1A-208	ENST00000494728	DPEP3	Q9H4B8	488 aa		12.47	□□□□□ -0.41
VTI1A-208	ENST00000494728	EBF3	Q9H4W6	596 aa		12.47	□□□□□ -0.41
VTI1A-208	ENST00000494728	C8orf33	Q9H7E9	229 aa	Predicted RBP	12.47	□□□□□ -0.41
VTI1A-208	ENST00000494728	MAGEF1	Q9HAY2	307 aa		12.47	□□□□□ -0.41
VTI1A-208	ENST00000494728	TPR	P12270	2363 aa	Known RBP	12.47	□□□□□ -0.41
VTI1A-208	ENST00000494728	C2orf78	A6NCI8	922 aa		12.46	□□□□□ -0.41
VTI1A-208	ENST00000494728	HSP90AA1	P07900	732 aa	Known RBP	12.46	□□□□□ -0.41
VTI1A-208	ENST00000494728	PDGFRB	P09619	1106 aa		12.46	□□□□□ -0.41
VTI1A-208	ENST00000494728	CSH1	P0DML2	217 aa		12.46	□□□□□ -0.41
VTI1A-208	ENST00000494728	CSH2	P0DML3	217 aa		12.46	□□□□□ -0.41
VTI1A-208	ENST00000494728	PFKFB1	P16118	471 aa		12.46	□□□□□ -0.41
VTI1A-208	ENST00000494728	WARS	P23381	471 aa	Known RBP	12.46	□□□□□ -0.41
VTI1A-208	ENST00000494728	BDNF	P23560	247 aa		12.46	□□□□□ -0.41
VTI1A-208	ENST00000494728	AVPR1A	P37288	418 aa		12.46	□□□□□ -0.41
VTI1A-208	ENST00000494728	LHX1	P48742	406 aa		12.46	□□□□□ -0.41

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