RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, human

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC66-222	ENST00000494672	PPP1R32	Q7Z5V6	425 aa		5.53	□□□□□ -1.52
CCDC66-222	ENST00000494672	FAM109A	Q8N4B1	249 aa		5.53	□□□□□ -1.52
CCDC66-222	ENST00000494672	SNRNP27	Q8WVK2	155 aa	Known RBP	5.53	□□□□□ -1.52
CCDC66-222	ENST00000494672	ASPSCR1	Q9BZE9	553 aa		5.53	□□□□□ -1.52
CCDC66-222	ENST00000494672	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	5.53	□□□□□ -1.52
CCDC66-222	ENST00000494672	PNPO	Q9NVS9	261 aa		5.53	□□□□□ -1.52
CCDC66-222	ENST00000494672	LINC01548	A6NM66	108 aa		5.52	□□□□□ -1.53
CCDC66-222	ENST00000494672	JTB	O76095	146 aa		5.52	□□□□□ -1.53
CCDC66-222	ENST00000494672	POU2F2	P09086	479 aa		5.52	□□□□□ -1.53
CCDC66-222	ENST00000494672	TYR	P14679	529 aa		5.52	□□□□□ -1.53
CCDC66-222	ENST00000494672	DRD4	P21917	467 aa		5.52	□□□□□ -1.53
CCDC66-222	ENST00000494672	TNNT2	P45379	298 aa	Predicted RBP	5.52	□□□□□ -1.53
CCDC66-222	ENST00000494672	TOB1	P50616	345 aa	Predicted RBP	5.52	□□□□□ -1.53
CCDC66-222	ENST00000494672	RHBDL3	P58872	404 aa		5.52	□□□□□ -1.53
CCDC66-222	ENST00000494672	CCDC157	Q569K6	752 aa		5.52	□□□□□ -1.53
CCDC66-222	ENST00000494672	ZNF618	Q5T7W0	954 aa		5.52	□□□□□ -1.53
CCDC66-222	ENST00000494672	VPS53	Q5VIR6	699 aa		5.52	□□□□□ -1.53
CCDC66-222	ENST00000494672	CEP85	Q6P2H3	762 aa		5.52	□□□□□ -1.53
CCDC66-222	ENST00000494672	LAYN	Q6UX15	382 aa		5.52	□□□□□ -1.53
CCDC66-222	ENST00000494672	DTX2	Q86UW9	622 aa		5.52	□□□□□ -1.53
CCDC66-222	ENST00000494672	FAM46D	Q8NEK8	389 aa		5.52	□□□□□ -1.53
CCDC66-222	ENST00000494672	KLHDC4	Q8TBB5	520 aa		5.52	□□□□□ -1.53
CCDC66-222	ENST00000494672	SCARB1	Q8WTV0	552 aa		5.52	□□□□□ -1.53
CCDC66-222	ENST00000494672	C1QTNF7	Q9BXJ2	289 aa		5.52	□□□□□ -1.53
CCDC66-222	ENST00000494672	PCDHA1	Q9Y5I3	950 aa		5.52	□□□□□ -1.53
CCDC66-222	ENST00000494672	WDR91	A4D1P6	747 aa		5.51	□□□□□ -1.53
CCDC66-222	ENST00000494672	TLR5	O60602	858 aa		5.51	□□□□□ -1.53
CCDC66-222	ENST00000494672	EIF3J	O75822	258 aa	Known RBP	5.51	□□□□□ -1.53
CCDC66-222	ENST00000494672	IL33	O95760	270 aa		5.51	□□□□□ -1.53
CCDC66-222	ENST00000494672	MAP2K6	P52564	334 aa		5.51	□□□□□ -1.53
CCDC66-222	ENST00000494672	SATB1	Q01826	763 aa		5.51	□□□□□ -1.53
CCDC66-222	ENST00000494672	TMEM119	Q4V9L6	283 aa		5.51	□□□□□ -1.53
CCDC66-222	ENST00000494672	AMOT	Q4VCS5	1084 aa		5.51	□□□□□ -1.53
CCDC66-222	ENST00000494672	ICE2	Q659A1	982 aa		5.51	□□□□□ -1.53
CCDC66-222	ENST00000494672	ANKRD16	Q6P6B7	361 aa		5.51	□□□□□ -1.53
CCDC66-222	ENST00000494672	TMEM108	Q6UXF1	575 aa		5.51	□□□□□ -1.53
CCDC66-222	ENST00000494672	C1QL2	Q7Z5L3	287 aa		5.51	□□□□□ -1.53
CCDC66-222	ENST00000494672	PPP1R3B	Q86XI6	285 aa		5.51	□□□□□ -1.53
CCDC66-222	ENST00000494672	ZCRB1	Q8TBF4	217 aa	Known RBP	5.51	□□□□□ -1.53
CCDC66-222	ENST00000494672	ZNF778	Q96MU6	729 aa		5.51	□□□□□ -1.53
CCDC66-222	ENST00000494672	MAF1	Q9H063	256 aa		5.51	□□□□□ -1.53
CCDC66-222	ENST00000494672	COMMD10	Q9Y6G5	202 aa		5.51	□□□□□ -1.53
CCDC66-222	ENST00000494672	RPGRIP1L	Q68CZ1	1315 aa		5.5	□□□□□ -1.53
CCDC66-222	ENST00000494672		H3BUI4	141 aa		5.5	□□□□□ -1.53
CCDC66-222	ENST00000494672	PPM1D	O15297	605 aa		5.5	□□□□□ -1.53
CCDC66-222	ENST00000494672	SLC16A3	O15427	465 aa	Known RBP	5.5	□□□□□ -1.53
CCDC66-222	ENST00000494672	ONECUT2	O95948	504 aa		5.5	□□□□□ -1.53
CCDC66-222	ENST00000494672	AHSG	P02765	367 aa		5.5	□□□□□ -1.53
CCDC66-222	ENST00000494672	VCAM1	P19320	739 aa		5.5	□□□□□ -1.53
CCDC66-222	ENST00000494672	PAX3	P23760	479 aa		5.5	□□□□□ -1.53
CCDC66-222	ENST00000494672	COPB2	P35606	906 aa		5.5	□□□□□ -1.53
CCDC66-222	ENST00000494672	TFF2	Q03403	129 aa		5.5	□□□□□ -1.53
CCDC66-222	ENST00000494672	EIF2B5	Q13144	721 aa	Known RBP	5.5	□□□□□ -1.53
CCDC66-222	ENST00000494672	PGS1	Q32NB8	556 aa		5.5	□□□□□ -1.53
CCDC66-222	ENST00000494672	SLC44A4	Q53GD3	710 aa		5.5	□□□□□ -1.53
CCDC66-222	ENST00000494672	AARS2	Q5JTZ9	985 aa	Known RBP	5.5	□□□□□ -1.53
CCDC66-222	ENST00000494672	DNTTIP2	Q5QJE6	756 aa	Known RBP	5.5	□□□□□ -1.53
CCDC66-222	ENST00000494672	TMEM240	Q5SV17	173 aa		5.5	□□□□□ -1.53
CCDC66-222	ENST00000494672	SLC29A4	Q7RTT9	530 aa		5.5	□□□□□ -1.53
CCDC66-222	ENST00000494672	WDR53	Q7Z5U6	358 aa	Predicted RBP	5.5	□□□□□ -1.53
CCDC66-222	ENST00000494672	CREBRF	Q8IUR6	639 aa		5.5	□□□□□ -1.53
CCDC66-222	ENST00000494672	FANCB	Q8NB91	859 aa		5.5	□□□□□ -1.53
CCDC66-222	ENST00000494672	BRIX1	Q8TDN6	353 aa	Known RBP	5.5	□□□□□ -1.53
CCDC66-222	ENST00000494672	TBC1D5	Q92609	795 aa		5.5	□□□□□ -1.53
CCDC66-222	ENST00000494672	HSPBAP1	Q96EW2	488 aa		5.5	□□□□□ -1.53
CCDC66-222	ENST00000494672	SLC46A1	Q96NT5	459 aa		5.5	□□□□□ -1.53
CCDC66-222	ENST00000494672	MAP7D2	Q96T17	732 aa		5.5	□□□□□ -1.53
CCDC66-222	ENST00000494672	SEMA4C	Q9C0C4	833 aa		5.5	□□□□□ -1.53
CCDC66-222	ENST00000494672	WDR26	Q9H7D7	661 aa		5.5	□□□□□ -1.53
CCDC66-222	ENST00000494672	PCDH12	Q9NPG4	1184 aa		5.5	□□□□□ -1.53
CCDC66-222	ENST00000494672	ZNF70	Q9UC06	446 aa	Predicted RBP	5.5	□□□□□ -1.53
CCDC66-222	ENST00000494672	LUC7L2	Q9Y383	392 aa	Known RBP	5.5	□□□□□ -1.53
CCDC66-222	ENST00000494672	COL4A3BP	Q9Y5P4	624 aa		5.5	□□□□□ -1.53
CCDC66-222	ENST00000494672	ZNF804B	A4D1E1	1349 aa		5.49	□□□□□ -1.53
CCDC66-222	ENST00000494672	VGLL3	A8MV65	326 aa		5.49	□□□□□ -1.53
CCDC66-222	ENST00000494672	QSOX1	O00391	747 aa		5.49	□□□□□ -1.53
CCDC66-222	ENST00000494672	ERBB2	P04626	1255 aa		5.49	□□□□□ -1.53
CCDC66-222	ENST00000494672	ATXN1L	P0C7T5	689 aa	Known RBP	5.49	□□□□□ -1.53
CCDC66-222	ENST00000494672	PIM1	P11309	404 aa	Predicted RBP	5.49	□□□□□ -1.53
CCDC66-222	ENST00000494672	JUP	P14923	745 aa		5.49	□□□□□ -1.53
CCDC66-222	ENST00000494672	AKAP5	P24588	427 aa		5.49	□□□□□ -1.53
CCDC66-222	ENST00000494672	BOP1	Q14137	746 aa	Known RBP	5.49	□□□□□ -1.53
CCDC66-222	ENST00000494672	MTX3	Q5HYI7	312 aa		5.49	□□□□□ -1.53
CCDC66-222	ENST00000494672	ZNF804A	Q7Z570	1209 aa		5.49	□□□□□ -1.53
CCDC66-222	ENST00000494672	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	5.49	□□□□□ -1.53
CCDC66-222	ENST00000494672	VGLL2	Q8N8G2	317 aa		5.49	□□□□□ -1.53
CCDC66-222	ENST00000494672	MOGAT1	Q96PD6	335 aa		5.49	□□□□□ -1.53
CCDC66-222	ENST00000494672	TTYH3	Q9C0H2	523 aa		5.49	□□□□□ -1.53
CCDC66-222	ENST00000494672	SERHL	Q9NQF3	203 aa		5.49	□□□□□ -1.53
CCDC66-222	ENST00000494672	HOMER2	Q9NSB8	354 aa		5.49	□□□□□ -1.53
CCDC66-222	ENST00000494672	SH3BP4	Q9P0V3	963 aa		5.49	□□□□□ -1.53
CCDC66-222	ENST00000494672	HESX1	Q9UBX0	185 aa		5.49	□□□□□ -1.53
CCDC66-222	ENST00000494672	SH2B3	Q9UQQ2	575 aa		5.49	□□□□□ -1.53
CCDC66-222	ENST00000494672	UNC13A	Q9UPW8	1703 aa		5.48	□□□□□ -1.53
CCDC66-222	ENST00000494672	ZCCHC6	Q5VYS8	1495 aa	Known RBP	5.48	□□□□□ -1.53
CCDC66-222	ENST00000494672	GOLGA6L3	A6NEY3	463 aa		5.48	□□□□□ -1.53
CCDC66-222	ENST00000494672	PDHA1	P08559	390 aa		5.48	□□□□□ -1.53
CCDC66-222	ENST00000494672	CERS1	P27544	350 aa		5.48	□□□□□ -1.53
CCDC66-222	ENST00000494672	CYP2C18	P33260	490 aa		5.48	□□□□□ -1.53
CCDC66-222	ENST00000494672	LOXL3	P58215	753 aa		5.48	□□□□□ -1.53

Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms