RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 HES2Q9Y543 173 aa8.92□□□□□ -0.98
RIF1-211ENST00000494333 IPPQ9Y573 584 aa8.92□□□□□ -0.98
RIF1-211ENST00000494333 XIRP2A4UGR9 3374 aa8.92□□□□□ -0.98
RIF1-211ENST00000494333 RALGAPA2Q2PPJ7 1873 aa8.91□□□□□ -0.98
RIF1-211ENST00000494333 FSD2A1L4K1 749 aa8.91□□□□□ -0.98
RIF1-211ENST00000494333 PI4K2BG5E9Z4 385 aa8.91□□□□□ -0.98
RIF1-211ENST00000494333 RGS13O14921 159 aa8.91□□□□□ -0.98
RIF1-211ENST00000494333 B4GALT5O43286 388 aa8.91□□□□□ -0.98
RIF1-211ENST00000494333 DDHD2O94830 711 aa8.91□□□□□ -0.98
RIF1-211ENST00000494333 EYA4O95677 639 aa8.91□□□□□ -0.98
RIF1-211ENST00000494333 GLP2RO95838 553 aa8.91□□□□□ -0.98
RIF1-211ENST00000494333 ARF4P18085 180 aaPredicted RBP8.91□□□□□ -0.98
RIF1-211ENST00000494333 CYP11B2P19099 503 aa8.91□□□□□ -0.98
RIF1-211ENST00000494333 MUTP22033 750 aa8.91□□□□□ -0.98
RIF1-211ENST00000494333 CDC25AP30304 524 aa8.91□□□□□ -0.98
RIF1-211ENST00000494333 SLC11A1P49279 550 aa8.91□□□□□ -0.98
RIF1-211ENST00000494333 COASYQ13057 564 aa8.91□□□□□ -0.98
RIF1-211ENST00000494333 SMAD4Q13485 552 aaKnown RBP8.91□□□□□ -0.98
RIF1-211ENST00000494333 SMC1AQ14683 1233 aaKnown RBP8.91□□□□□ -0.98
RIF1-211ENST00000494333 RILPL1Q5EBL4 403 aa8.91□□□□□ -0.98
RIF1-211ENST00000494333 LARP1BQ659C4 914 aaKnown RBP8.91□□□□□ -0.98
RIF1-211ENST00000494333 DDX53Q86TM3 631 aaKnown RBP8.91□□□□□ -0.98
RIF1-211ENST00000494333 TMEM173Q86WV6 379 aaPredicted RBP8.91□□□□□ -0.98
RIF1-211ENST00000494333 ADHFE1Q8IWW8 467 aa8.91□□□□□ -0.98
RIF1-211ENST00000494333 VPS52Q8N1B4 723 aa8.91□□□□□ -0.98
RIF1-211ENST00000494333 IGSF22Q8N9C0 903 aa8.91□□□□□ -0.98
RIF1-211ENST00000494333 VN1R2Q8NFZ6 395 aa8.91□□□□□ -0.98
RIF1-211ENST00000494333 IGSF21Q96ID5 467 aa8.91□□□□□ -0.98
RIF1-211ENST00000494333 APOL6Q9BWW8 343 aa8.91□□□□□ -0.98
RIF1-211ENST00000494333 RAB34Q9BZG1 259 aa8.91□□□□□ -0.98
RIF1-211ENST00000494333 BHMT2Q9H2M3 363 aa8.91□□□□□ -0.98
RIF1-211ENST00000494333 UBN1Q9NPG3 1134 aa8.91□□□□□ -0.98
RIF1-211ENST00000494333 DDX19AQ9NUU7 478 aaKnown RBP8.91□□□□□ -0.98
RIF1-211ENST00000494333 SMC3Q9UQE7 1217 aa8.91□□□□□ -0.98
RIF1-211ENST00000494333 MAPK8IP1Q9UQF2 711 aa8.91□□□□□ -0.98
RIF1-211ENST00000494333 FAN1Q9Y2M0 1017 aa8.91□□□□□ -0.98
RIF1-211ENST00000494333 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.91□□□□□ -0.98
RIF1-211ENST00000494333 TRANK1O15050 2925 aa8.91□□□□□ -0.98
RIF1-211ENST00000494333 NLRC5Q86WI3 1866 aa8.91□□□□□ -0.98
RIF1-211ENST00000494333 WDR81Q562E7 1941 aa8.9□□□□□ -0.98
RIF1-211ENST00000494333 CNTNAP2Q9UHC6 1331 aa8.9□□□□□ -0.98
RIF1-211ENST00000494333 A0A1B0GUA9 196 aa8.9□□□□□ -0.98
RIF1-211ENST00000494333 C2orf71A6NGG8 1288 aa8.9□□□□□ -0.98
RIF1-211ENST00000494333 PP2D1A8MPX8 630 aa8.9□□□□□ -0.98
RIF1-211ENST00000494333 E9PMD0 336 aa8.9□□□□□ -0.98
RIF1-211ENST00000494333 LAD1O00515 517 aa8.9□□□□□ -0.98
RIF1-211ENST00000494333 NRP1O14786 923 aa8.9□□□□□ -0.98
RIF1-211ENST00000494333 B4GALT3O60512 393 aa8.9□□□□□ -0.98
RIF1-211ENST00000494333 NME1P15531 152 aaKnown RBP8.9□□□□□ -0.98
RIF1-211ENST00000494333 AKAP5P24588 427 aa8.9□□□□□ -0.98
RIF1-211ENST00000494333 MLH1P40692 756 aa8.9□□□□□ -0.98
RIF1-211ENST00000494333 PRPHP41219 470 aa8.9□□□□□ -0.98
RIF1-211ENST00000494333 CD97P48960 835 aa8.9□□□□□ -0.98
RIF1-211ENST00000494333 OXCT1P55809 520 aa8.9□□□□□ -0.98
RIF1-211ENST00000494333 ZP2Q05996 745 aa8.9□□□□□ -0.98
RIF1-211ENST00000494333 KCNC3Q14003 757 aa8.9□□□□□ -0.98
RIF1-211ENST00000494333 IL17AQ16552 155 aa8.9□□□□□ -0.98
RIF1-211ENST00000494333 MSMPQ1L6U9 139 aa8.9□□□□□ -0.98
RIF1-211ENST00000494333 SFRP5Q5T4F7 317 aa8.9□□□□□ -0.98
RIF1-211ENST00000494333 KRT79Q5XKE5 535 aa8.9□□□□□ -0.98
RIF1-211ENST00000494333 SLC27A1Q6PCB7 646 aa8.9□□□□□ -0.98
RIF1-211ENST00000494333 TMEM184AQ6ZMB5 413 aa8.9□□□□□ -0.98
RIF1-211ENST00000494333 ZBTB8OSQ8IWT0 167 aa8.9□□□□□ -0.98
RIF1-211ENST00000494333 HACE1Q8IYU2 909 aa8.9□□□□□ -0.98
RIF1-211ENST00000494333 RBBP8NLQ8NC74 664 aaPredicted RBP8.9□□□□□ -0.98
RIF1-211ENST00000494333 SMRP1Q8NCR6 262 aa8.9□□□□□ -0.98
RIF1-211ENST00000494333 BCL7CQ8WUZ0 217 aaPredicted RBP8.9□□□□□ -0.98
RIF1-211ENST00000494333 AUTS2Q8WXX7 1259 aa8.9□□□□□ -0.98
RIF1-211ENST00000494333 CCDC51Q96ER9 411 aa8.9□□□□□ -0.98
RIF1-211ENST00000494333 GAD1Q99259 594 aa8.9□□□□□ -0.98
RIF1-211ENST00000494333 APOL5Q9BWW9 433 aa8.9□□□□□ -0.98
RIF1-211ENST00000494333 SRRTQ9BXP5 876 aaKnown RBP8.9□□□□□ -0.98
RIF1-211ENST00000494333 FZD8Q9H461 694 aa8.9□□□□□ -0.98
RIF1-211ENST00000494333 PRMT7Q9NVM4 692 aaPredicted RBP8.9□□□□□ -0.98
RIF1-211ENST00000494333 MIOSQ9NXC5 875 aa8.9□□□□□ -0.98
RIF1-211ENST00000494333 DNM3Q9UQ16 869 aa8.9□□□□□ -0.98
RIF1-211ENST00000494333 REV3LO60673 3130 aa8.9□□□□□ -0.98
RIF1-211ENST00000494333 FNDC1Q4ZHG4 1894 aaPredicted RBP8.89□□□□□ -0.99
RIF1-211ENST00000494333 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.89□□□□□ -0.99
RIF1-211ENST00000494333 ARL5CA6NH57 179 aa8.89□□□□□ -0.99
RIF1-211ENST00000494333 UBOX5O94941 541 aa8.89□□□□□ -0.99
RIF1-211ENST00000494333 NPTXRO95502 500 aa8.89□□□□□ -0.99
RIF1-211ENST00000494333 SRGAP2BP0DMP2 458 aa8.89□□□□□ -0.99
RIF1-211ENST00000494333 CTSAP10619 480 aa8.89□□□□□ -0.99
RIF1-211ENST00000494333 ALADP13716 330 aa8.89□□□□□ -0.99
RIF1-211ENST00000494333 POLR2BP30876 1174 aaKnown RBP8.89□□□□□ -0.99
RIF1-211ENST00000494333 GBP1P32455 592 aa8.89□□□□□ -0.99
RIF1-211ENST00000494333 ETV3P41162 512 aa8.89□□□□□ -0.99
RIF1-211ENST00000494333 NAMPTP43490 491 aa8.89□□□□□ -0.99
RIF1-211ENST00000494333 OR1G1P47890 313 aa8.89□□□□□ -0.99
RIF1-211ENST00000494333 SCNN1GP51170 649 aa8.89□□□□□ -0.99
RIF1-211ENST00000494333 GIT2Q14161 759 aa8.89□□□□□ -0.99
RIF1-211ENST00000494333 ZRSR1Q15695 479 aaKnown RBP8.89□□□□□ -0.99
RIF1-211ENST00000494333 MAPK6Q16659 721 aa8.89□□□□□ -0.99
RIF1-211ENST00000494333 CDCA2Q69YH5 1023 aaPredicted RBP8.89□□□□□ -0.99
RIF1-211ENST00000494333 ANKRD54Q6NXT1 300 aa8.89□□□□□ -0.99
RIF1-211ENST00000494333 COLGALT2Q8IYK4 626 aa8.89□□□□□ -0.99
RIF1-211ENST00000494333 PLD6Q8N2A8 252 aaKnown RBP8.89□□□□□ -0.99
RIF1-211ENST00000494333 DEPTORQ8TB45 409 aa8.89□□□□□ -0.99
RIF1-211ENST00000494333 IFT74Q96LB3 600 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms