RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 CYP26A1O43174 497 aa15.46■□□□□ 0.07
BRCA1-223ENST00000494123 C8AP07357 584 aa15.46■□□□□ 0.07
BRCA1-223ENST00000494123 TPM1P09493 284 aa15.46■□□□□ 0.07
BRCA1-223ENST00000494123 VDRP11473 427 aa15.46■□□□□ 0.07
BRCA1-223ENST00000494123 ADORA2BP29275 332 aa15.46■□□□□ 0.07
BRCA1-223ENST00000494123 JAM2P57087 298 aa15.46■□□□□ 0.07
BRCA1-223ENST00000494123 RBM10P98175 930 aaKnown RBP15.46■□□□□ 0.07
BRCA1-223ENST00000494123 PTK2Q05397 1052 aa15.46■□□□□ 0.07
BRCA1-223ENST00000494123 SKIV2LQ15477 1246 aaKnown RBP15.46■□□□□ 0.07
BRCA1-223ENST00000494123 MGAT5BQ3V5L5 792 aa15.46■□□□□ 0.07
BRCA1-223ENST00000494123 CFAP221Q4G0U5 840 aa15.46■□□□□ 0.07
BRCA1-223ENST00000494123 TCEAL8Q8IYN2 117 aa15.46■□□□□ 0.07
BRCA1-223ENST00000494123 FAM71AQ8IYT1 594 aa15.46■□□□□ 0.07
BRCA1-223ENST00000494123 ZNF397Q8NF99 534 aaPredicted RBP15.46■□□□□ 0.07
BRCA1-223ENST00000494123 SLC7A14Q8TBB6 771 aa15.46■□□□□ 0.07
BRCA1-223ENST00000494123 HDAC7Q8WUI4 952 aa15.46■□□□□ 0.07
BRCA1-223ENST00000494123 MRFAP1L1Q96HT8 127 aa15.46■□□□□ 0.07
BRCA1-223ENST00000494123 B3GNT5Q9BYG0 378 aa15.46■□□□□ 0.07
BRCA1-223ENST00000494123 EDEM3Q9BZQ6 932 aa15.46■□□□□ 0.07
BRCA1-223ENST00000494123 GPR88Q9GZN0 384 aa15.46■□□□□ 0.07
BRCA1-223ENST00000494123 ABCB6Q9NP58 842 aa15.46■□□□□ 0.07
BRCA1-223ENST00000494123 DZANK1Q9NVP4 752 aa15.46■□□□□ 0.07
BRCA1-223ENST00000494123 CLDND1Q9NY35 253 aa15.46■□□□□ 0.07
BRCA1-223ENST00000494123 HSFX1Q9UBD0 423 aa15.46■□□□□ 0.07
BRCA1-223ENST00000494123 SLC27A5Q9Y2P5 690 aa15.46■□□□□ 0.07
BRCA1-223ENST00000494123 CLDN5O00501 218 aa15.46■□□□□ 0.06
BRCA1-223ENST00000494123 LINC01565O15544 149 aa15.46■□□□□ 0.06
BRCA1-223ENST00000494123 GFPT2O94808 682 aa15.46■□□□□ 0.06
BRCA1-223ENST00000494123 SEC24AO95486 1093 aa15.46■□□□□ 0.06
BRCA1-223ENST00000494123 VNN2O95498 520 aa15.46■□□□□ 0.06
BRCA1-223ENST00000494123 BDNFP23560 247 aa15.46■□□□□ 0.06
BRCA1-223ENST00000494123 GNA15P30679 374 aa15.46■□□□□ 0.06
BRCA1-223ENST00000494123 SOX5P35711 763 aa15.46■□□□□ 0.06
BRCA1-223ENST00000494123 TUFMP49411 452 aaKnown RBP15.46■□□□□ 0.06
BRCA1-223ENST00000494123 BPIFB4P59827 614 aa15.46■□□□□ 0.06
BRCA1-223ENST00000494123 TRIM14Q14142 442 aa15.46■□□□□ 0.06
BRCA1-223ENST00000494123 PPM1LQ5SGD2 360 aa15.46■□□□□ 0.06
BRCA1-223ENST00000494123 PPP1R26Q5T8A7 1209 aaPredicted RBP15.46■□□□□ 0.06
BRCA1-223ENST00000494123 TMC6Q7Z403 805 aa15.46■□□□□ 0.06
BRCA1-223ENST00000494123 FAM35AQ86V20 835 aa15.46■□□□□ 0.06
BRCA1-223ENST00000494123 FMNL3Q8IVF7 1028 aa15.46■□□□□ 0.06
BRCA1-223ENST00000494123 VN1R2Q8NFZ6 395 aa15.46■□□□□ 0.06
BRCA1-223ENST00000494123 CPLX3Q8WVH0 158 aa15.46■□□□□ 0.06
BRCA1-223ENST00000494123 SMARCD1Q96GM5 515 aa15.46■□□□□ 0.06
BRCA1-223ENST00000494123 RHOBTB2Q9BYZ6 727 aa15.46■□□□□ 0.06
BRCA1-223ENST00000494123 ZNF518BQ9C0D4 1074 aa15.46■□□□□ 0.06
BRCA1-223ENST00000494123 TTYH3Q9C0H2 523 aa15.46■□□□□ 0.06
BRCA1-223ENST00000494123 GRPEL1Q9HAV7 217 aa15.46■□□□□ 0.06
BRCA1-223ENST00000494123 THAP12O43422 761 aa15.45■□□□□ 0.06
BRCA1-223ENST00000494123 MED7O43513 233 aa15.45■□□□□ 0.06
BRCA1-223ENST00000494123 LRG1P02750 347 aa15.45■□□□□ 0.06
BRCA1-223ENST00000494123 HAPLN1P10915 354 aaPredicted RBP15.45■□□□□ 0.06
BRCA1-223ENST00000494123 CYP2F1P24903 491 aa15.45■□□□□ 0.06
BRCA1-223ENST00000494123 BRD2P25440 801 aaKnown RBP15.45■□□□□ 0.06
BRCA1-223ENST00000494123 ALDH1A3P47895 512 aa15.45■□□□□ 0.06
BRCA1-223ENST00000494123 ADAM15Q13444 863 aa15.45■□□□□ 0.06
BRCA1-223ENST00000494123 KCNC3Q14003 757 aa15.45■□□□□ 0.06
BRCA1-223ENST00000494123 SCN4BQ8IWT1 228 aa15.45■□□□□ 0.06
BRCA1-223ENST00000494123 FUKQ8N0W3 1084 aa15.45■□□□□ 0.06
BRCA1-223ENST00000494123 TTC9BQ8N6N2 239 aa15.45■□□□□ 0.06
BRCA1-223ENST00000494123 PABPC5Q96DU9 382 aaKnown RBP15.45■□□□□ 0.06
BRCA1-223ENST00000494123 HNRNPABQ99729 332 aaKnown RBP15.45■□□□□ 0.06
BRCA1-223ENST00000494123 CRISPLD1Q9H336 500 aa15.45■□□□□ 0.06
BRCA1-223ENST00000494123 KRT82Q9NSB4 513 aa15.45■□□□□ 0.06
BRCA1-223ENST00000494123 HESX1Q9UBX0 185 aa15.45■□□□□ 0.06
BRCA1-223ENST00000494123 MYO6Q9UM54 1294 aa15.45■□□□□ 0.06
BRCA1-223ENST00000494123 YIPF1Q9Y548 306 aa15.45■□□□□ 0.06
BRCA1-223ENST00000494123 INSL5Q9Y5Q6 135 aa15.45■□□□□ 0.06
BRCA1-223ENST00000494123 PTPRDP23468 1912 aa15.44■□□□□ 0.06
BRCA1-223ENST00000494123 MYH10P35580 1976 aa15.44■□□□□ 0.06
BRCA1-223ENST00000494123 A0A1W2PQJ5 194 aa15.44■□□□□ 0.06
BRCA1-223ENST00000494123 LRRC53A6NM62 1247 aa15.44■□□□□ 0.06
BRCA1-223ENST00000494123 ZMYND10O75800 440 aa15.44■□□□□ 0.06
BRCA1-223ENST00000494123 AP1G2O75843 785 aa15.44■□□□□ 0.06
BRCA1-223ENST00000494123 ADCY5O95622 1261 aa15.44■□□□□ 0.06
BRCA1-223ENST00000494123 GLP2RO95838 553 aa15.44■□□□□ 0.06
BRCA1-223ENST00000494123 CALCAP01258 141 aa15.44■□□□□ 0.06
BRCA1-223ENST00000494123 CCDC172P0C7W6 258 aa15.44■□□□□ 0.06
BRCA1-223ENST00000494123 FAM200BP0CF97 657 aa15.44■□□□□ 0.06
BRCA1-223ENST00000494123 ANXA13P27216 316 aa15.44■□□□□ 0.06
BRCA1-223ENST00000494123 CLCN1P35523 988 aa15.44■□□□□ 0.06
BRCA1-223ENST00000494123 GRIK1P39086 918 aa15.44■□□□□ 0.06
BRCA1-223ENST00000494123 MAGEA11P43364 429 aa15.44■□□□□ 0.06
BRCA1-223ENST00000494123 PDE6CP51160 858 aa15.44■□□□□ 0.06
BRCA1-223ENST00000494123 SLC8A3P57103 927 aa15.44■□□□□ 0.06
BRCA1-223ENST00000494123 RPL10AP62906 217 aaKnown RBP15.44■□□□□ 0.06
BRCA1-223ENST00000494123 ARID5AQ03989 594 aa15.44■□□□□ 0.06
BRCA1-223ENST00000494123 PLD1Q13393 1074 aa15.44■□□□□ 0.06
BRCA1-223ENST00000494123 STILQ15468 1287 aa15.44■□□□□ 0.06
BRCA1-223ENST00000494123 GOLGA7BQ2TAP0 167 aa15.44■□□□□ 0.06
BRCA1-223ENST00000494123 ARHGAP17Q68EM7 881 aa15.44■□□□□ 0.06
BRCA1-223ENST00000494123 VSTM1Q6UX27 236 aa15.44■□□□□ 0.06
BRCA1-223ENST00000494123 TMEM184AQ6ZMB5 413 aa15.44■□□□□ 0.06
BRCA1-223ENST00000494123 RTL10Q7L3V2 364 aa15.44■□□□□ 0.06
BRCA1-223ENST00000494123 SLC47A2Q86VL8 602 aa15.44■□□□□ 0.06
BRCA1-223ENST00000494123 GPIHBP1Q8IV16 184 aa15.44■□□□□ 0.06
BRCA1-223ENST00000494123 DRC7Q8IY82 874 aa15.44■□□□□ 0.06
BRCA1-223ENST00000494123 BAP1Q92560 729 aa15.44■□□□□ 0.06
BRCA1-223ENST00000494123 SFXN1Q9H9B4 322 aa15.44■□□□□ 0.06
BRCA1-223ENST00000494123 ACP6Q9NPH0 428 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms