RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 CYP2F1P24903 491 aa14.36□□□□□ -0.11
CTDSP1-212ENST00000494067 LMO2P25791 158 aa14.36□□□□□ -0.11
CTDSP1-212ENST00000494067 HOXC13P31276 330 aa14.36□□□□□ -0.11
CTDSP1-212ENST00000494067 ID4P47928 161 aa14.36□□□□□ -0.11
CTDSP1-212ENST00000494067 SNRPFP62306 86 aaKnown RBP14.36□□□□□ -0.11
CTDSP1-212ENST00000494067 FOXK2Q01167 660 aa14.36□□□□□ -0.11
CTDSP1-212ENST00000494067 MTAPQ13126 283 aa14.36□□□□□ -0.11
CTDSP1-212ENST00000494067 BMT2Q1RMZ1 405 aa14.36□□□□□ -0.11
CTDSP1-212ENST00000494067 INTS6LQ5JSJ4 861 aaKnown RBP14.36□□□□□ -0.11
CTDSP1-212ENST00000494067 CC2D1AQ6P1N0 951 aaPredicted RBP14.36□□□□□ -0.11
CTDSP1-212ENST00000494067 TSSK4Q6SA08 328 aa14.36□□□□□ -0.11
CTDSP1-212ENST00000494067 MAMSTRQ6ZN01 415 aa14.36□□□□□ -0.11
CTDSP1-212ENST00000494067 HS2ST1Q7LGA3 356 aa14.36□□□□□ -0.11
CTDSP1-212ENST00000494067 RALGPS2Q86X27 583 aaPredicted RBP14.36□□□□□ -0.11
CTDSP1-212ENST00000494067 ADGRF2Q8IZF7 708 aa14.36□□□□□ -0.11
CTDSP1-212ENST00000494067 KIAA0895Q8NCT3 520 aa14.36□□□□□ -0.11
CTDSP1-212ENST00000494067 TTC8Q8TAM2 541 aa14.36□□□□□ -0.11
CTDSP1-212ENST00000494067 ELMO3Q96BJ8 720 aa14.36□□□□□ -0.11
CTDSP1-212ENST00000494067 CHFRQ96EP1 664 aa14.36□□□□□ -0.11
CTDSP1-212ENST00000494067 FNBP1Q96RU3 617 aa14.36□□□□□ -0.11
CTDSP1-212ENST00000494067 SLC46A2Q9BY10 475 aa14.36□□□□□ -0.11
CTDSP1-212ENST00000494067 NCDNQ9UBB6 729 aa14.36□□□□□ -0.11
CTDSP1-212ENST00000494067 GTF3C4Q9UKN8 822 aa14.36□□□□□ -0.11
CTDSP1-212ENST00000494067 CCL26Q9Y258 94 aa14.36□□□□□ -0.11
CTDSP1-212ENST00000494067 HELZP42694 1942 aaKnown RBP14.35□□□□□ -0.11
CTDSP1-212ENST00000494067 FRYLO94915 3013 aa14.35□□□□□ -0.11
CTDSP1-212ENST00000494067 SLC38A8A6NNN8 435 aa14.35□□□□□ -0.11
CTDSP1-212ENST00000494067 TNNI1P19237 187 aa14.35□□□□□ -0.11
CTDSP1-212ENST00000494067 CXCL12P48061 93 aa14.35□□□□□ -0.11
CTDSP1-212ENST00000494067 CASP4P49662 377 aa14.35□□□□□ -0.11
CTDSP1-212ENST00000494067 CYP2J2P51589 502 aa14.35□□□□□ -0.11
CTDSP1-212ENST00000494067 PSMC1P62191 440 aaKnown RBP14.35□□□□□ -0.11
CTDSP1-212ENST00000494067 AMPD2Q01433 879 aa14.35□□□□□ -0.11
CTDSP1-212ENST00000494067 TNK2Q07912 1038 aa14.35□□□□□ -0.11
CTDSP1-212ENST00000494067 STK4Q13043 487 aa14.35□□□□□ -0.11
CTDSP1-212ENST00000494067 GAS6Q14393 721 aa14.35□□□□□ -0.11
CTDSP1-212ENST00000494067 MAPRE1Q15691 268 aaKnown RBP14.35□□□□□ -0.11
CTDSP1-212ENST00000494067 SNRNP35Q16560 246 aaKnown RBP14.35□□□□□ -0.11
CTDSP1-212ENST00000494067 DDR2Q16832 855 aa14.35□□□□□ -0.11
CTDSP1-212ENST00000494067 DGKKQ5KSL6 1271 aa14.35□□□□□ -0.11
CTDSP1-212ENST00000494067 TXNDC11Q6PKC3 985 aa14.35□□□□□ -0.11
CTDSP1-212ENST00000494067 C4orf50Q6ZRC1 276 aa14.35□□□□□ -0.11
CTDSP1-212ENST00000494067 WDR49Q8IV35 697 aa14.35□□□□□ -0.11
CTDSP1-212ENST00000494067 CEP57L1Q8IYX8 460 aa14.35□□□□□ -0.11
CTDSP1-212ENST00000494067 CMTM8Q8IZV2 173 aa14.35□□□□□ -0.11
CTDSP1-212ENST00000494067 GPR161Q8N6U8 529 aaKnown RBP14.35□□□□□ -0.11
CTDSP1-212ENST00000494067 MAB21L3Q8N8X9 362 aa14.35□□□□□ -0.11
CTDSP1-212ENST00000494067 FSIP1Q8NA03 581 aa14.35□□□□□ -0.11
CTDSP1-212ENST00000494067 EXOC4Q96A65 974 aa14.35□□□□□ -0.11
CTDSP1-212ENST00000494067 PAGE5Q96GU1 130 aa14.35□□□□□ -0.11
CTDSP1-212ENST00000494067 HPDLQ96IR7 371 aa14.35□□□□□ -0.11
CTDSP1-212ENST00000494067 MMS19Q96T76 1030 aa14.35□□□□□ -0.11
CTDSP1-212ENST00000494067 KIF9Q9HAQ2 790 aa14.35□□□□□ -0.11
CTDSP1-212ENST00000494067 CRTAC1Q9NQ79 661 aa14.35□□□□□ -0.11
CTDSP1-212ENST00000494067 PRMT8Q9NR22 394 aaPredicted RBP14.35□□□□□ -0.11
CTDSP1-212ENST00000494067 RAB23Q9ULC3 237 aa14.35□□□□□ -0.11
CTDSP1-212ENST00000494067 UBE4BO95155 1302 aa14.35□□□□□ -0.11
CTDSP1-212ENST00000494067 A0A1B0GVL5 298 aa14.34□□□□□ -0.11
CTDSP1-212ENST00000494067 SPECC1L-ADORA2AF8WAN1 911 aa14.34□□□□□ -0.11
CTDSP1-212ENST00000494067 PRR29P0C7W0 189 aa14.34□□□□□ -0.11
CTDSP1-212ENST00000494067 CHRNB1P11230 501 aa14.34□□□□□ -0.11
CTDSP1-212ENST00000494067 TDGF1P13385 188 aa14.34□□□□□ -0.11
CTDSP1-212ENST00000494067 PFKFB1P16118 471 aa14.34□□□□□ -0.11
CTDSP1-212ENST00000494067 NLRP12P59046 1061 aa14.34□□□□□ -0.11
CTDSP1-212ENST00000494067 CYP24A1Q07973 514 aa14.34□□□□□ -0.11
CTDSP1-212ENST00000494067 PSMD6Q15008 389 aa14.34□□□□□ -0.11
CTDSP1-212ENST00000494067 ITPRIPL2Q3MIP1 535 aa14.34□□□□□ -0.11
CTDSP1-212ENST00000494067 TRAPPC11Q7Z392 1133 aa14.34□□□□□ -0.11
CTDSP1-212ENST00000494067 SCN4BQ8IWT1 228 aa14.34□□□□□ -0.11
CTDSP1-212ENST00000494067 KIAA2013Q8IYS2 634 aa14.34□□□□□ -0.11
CTDSP1-212ENST00000494067 ZBTB44Q8NCP5 570 aa14.34□□□□□ -0.11
CTDSP1-212ENST00000494067 FUBP3Q96I24 572 aaKnown RBP eCLIP14.34□□□□□ -0.11
CTDSP1-212ENST00000494067 CGRRF1Q99675 332 aa14.34□□□□□ -0.11
CTDSP1-212ENST00000494067 MRPL45Q9BRJ2 306 aaKnown RBP14.34□□□□□ -0.11
CTDSP1-212ENST00000494067 RBM12Q9NTZ6 932 aaKnown RBP14.34□□□□□ -0.11
CTDSP1-212ENST00000494067 TMEM30AQ9NV96 361 aa14.34□□□□□ -0.11
CTDSP1-212ENST00000494067 C2orf42Q9NWW7 574 aa14.34□□□□□ -0.11
CTDSP1-212ENST00000494067 GTSE1Q9NYZ3 720 aa14.34□□□□□ -0.11
CTDSP1-212ENST00000494067 EHD2Q9NZN4 543 aa14.34□□□□□ -0.11
CTDSP1-212ENST00000494067 CGNQ9P2M7 1197 aaKnown RBP14.34□□□□□ -0.11
CTDSP1-212ENST00000494067 MAGEC2Q9UBF1 373 aaPredicted RBP14.34□□□□□ -0.11
CTDSP1-212ENST00000494067 CDH9Q9ULB4 789 aa14.34□□□□□ -0.11
CTDSP1-212ENST00000494067 HPSEQ9Y251 543 aa14.34□□□□□ -0.11
CTDSP1-212ENST00000494067 ZNF638Q14966 1978 aaKnown RBP14.34□□□□□ -0.11
CTDSP1-212ENST00000494067 DNAH14Q0VDD8 3507 aa14.34□□□□□ -0.11
CTDSP1-212ENST00000494067 PVALEFA0A1B0GWK0 134 aa14.33□□□□□ -0.12
CTDSP1-212ENST00000494067 OTOL1A6NHN0 477 aaPredicted RBP14.33□□□□□ -0.12
CTDSP1-212ENST00000494067 SLFN14P0C7P3 912 aa14.33□□□□□ -0.12
CTDSP1-212ENST00000494067 DLATP10515 647 aaKnown RBP14.33□□□□□ -0.12
CTDSP1-212ENST00000494067 ANXA13P27216 316 aa14.33□□□□□ -0.12
CTDSP1-212ENST00000494067 CTHP32929 405 aa14.33□□□□□ -0.12
CTDSP1-212ENST00000494067 TRPC3Q13507 836 aa14.33□□□□□ -0.12
CTDSP1-212ENST00000494067 CFAP221Q4G0U5 840 aa14.33□□□□□ -0.12
CTDSP1-212ENST00000494067 TXNDC8Q6A555 127 aa14.33□□□□□ -0.12
CTDSP1-212ENST00000494067 FAM171BQ6P995 826 aa14.33□□□□□ -0.12
CTDSP1-212ENST00000494067 SYNPOQ8N3V7 929 aa14.33□□□□□ -0.12
CTDSP1-212ENST00000494067 SPEM1Q8N4L4 309 aa14.33□□□□□ -0.12
CTDSP1-212ENST00000494067 XXYLT1Q8NBI6 393 aa14.33□□□□□ -0.12
CTDSP1-212ENST00000494067 NELL1Q92832 810 aa14.33□□□□□ -0.12
CTDSP1-212ENST00000494067 USP13Q92995 863 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms