RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 PDP2Q9P2J9 529 aa7.18□□□□□ -1.26
SMC2-205ENST00000493955 SCAF8Q9UPN6 1271 aaKnown RBP7.18□□□□□ -1.26
SMC2-205ENST00000493955 CDY1Q9Y6F8 540 aa7.18□□□□□ -1.26
SMC2-205ENST00000493955 GLP2RO95838 553 aa7.18□□□□□ -1.26
SMC2-205ENST00000493955 NPPBP16860 134 aa7.18□□□□□ -1.26
SMC2-205ENST00000493955 CHRM3P20309 590 aa7.18□□□□□ -1.26
SMC2-205ENST00000493955 ATICP31939 592 aa7.18□□□□□ -1.26
SMC2-205ENST00000493955 MSX2P35548 267 aaPredicted RBP7.18□□□□□ -1.26
SMC2-205ENST00000493955 TMTC4Q5T4D3 741 aa7.18□□□□□ -1.26
SMC2-205ENST00000493955 CACHD1Q5VU97 1274 aa7.18□□□□□ -1.26
SMC2-205ENST00000493955 SULT6B1Q6IMI4 303 aa7.18□□□□□ -1.26
SMC2-205ENST00000493955 TAF2Q6P1X5 1199 aa7.18□□□□□ -1.26
SMC2-205ENST00000493955 LAYNQ6UX15 382 aa7.18□□□□□ -1.26
SMC2-205ENST00000493955 D2HGDHQ8N465 521 aa7.18□□□□□ -1.26
SMC2-205ENST00000493955 USP13Q92995 863 aaPredicted RBP7.18□□□□□ -1.26
SMC2-205ENST00000493955 MPP4Q96JB8 637 aa7.18□□□□□ -1.26
SMC2-205ENST00000493955 GNRHR2Q96P88 292 aa7.18□□□□□ -1.26
SMC2-205ENST00000493955 ZBTB26Q9HCK0 441 aa7.18□□□□□ -1.26
SMC2-205ENST00000493955 DNMT3BQ9UBC3 853 aaKnown RBP7.18□□□□□ -1.26
SMC2-205ENST00000493955 CA14Q9ULX7 337 aa7.18□□□□□ -1.26
SMC2-205ENST00000493955 RAD54BQ9Y620 910 aa7.18□□□□□ -1.26
SMC2-205ENST00000493955 SLC30A1Q9Y6M5 507 aa7.18□□□□□ -1.26
SMC2-205ENST00000493955 CCDC195A0A1B0GUA6 201 aa7.17□□□□□ -1.26
SMC2-205ENST00000493955 RRN3P2A6NIE6 340 aa7.17□□□□□ -1.26
SMC2-205ENST00000493955 PRRT4C9JH25 899 aa7.17□□□□□ -1.26
SMC2-205ENST00000493955 PIAS2O75928 621 aa7.17□□□□□ -1.26
SMC2-205ENST00000493955 MST1P26927 711 aa7.17□□□□□ -1.26
SMC2-205ENST00000493955 LRPAP1P30533 357 aa7.17□□□□□ -1.26
SMC2-205ENST00000493955 GCLCP48506 637 aaPredicted RBP7.17□□□□□ -1.26
SMC2-205ENST00000493955 PXNP49023 591 aaPredicted RBP7.17□□□□□ -1.26
SMC2-205ENST00000493955 POLE2P56282 527 aa7.17□□□□□ -1.26
SMC2-205ENST00000493955 LILRA4P59901 499 aa7.17□□□□□ -1.26
SMC2-205ENST00000493955 NSUN2Q08J23 767 aaKnown RBP eCLIP7.17□□□□□ -1.26
SMC2-205ENST00000493955 FOXL1Q12952 345 aa7.17□□□□□ -1.26
SMC2-205ENST00000493955 KCNAB1Q14722 419 aa7.17□□□□□ -1.26
SMC2-205ENST00000493955 ZNF648Q5T619 568 aaPredicted RBP7.17□□□□□ -1.26
SMC2-205ENST00000493955 AGAP9Q5VTM2 703 aa7.17□□□□□ -1.26
SMC2-205ENST00000493955 KLHL17Q6TDP4 642 aa7.17□□□□□ -1.26
SMC2-205ENST00000493955 SLC30A10Q6XR72 485 aa7.17□□□□□ -1.26
SMC2-205ENST00000493955 KCTD20Q7Z5Y7 419 aa7.17□□□□□ -1.26
SMC2-205ENST00000493955 ZNF280BQ86YH2 543 aa7.17□□□□□ -1.26
SMC2-205ENST00000493955 RHOT2Q8IXI1 618 aa7.17□□□□□ -1.26
SMC2-205ENST00000493955 SP8Q8IXZ3 490 aa7.17□□□□□ -1.26
SMC2-205ENST00000493955 NSUN7Q8NE18 718 aaKnown RBP7.17□□□□□ -1.26
SMC2-205ENST00000493955 OTUD7AQ8TE49 926 aaPredicted RBP7.17□□□□□ -1.26
SMC2-205ENST00000493955 MIEF2Q96C03 454 aa7.17□□□□□ -1.26
SMC2-205ENST00000493955 SENP7Q9BQF6 1050 aa7.17□□□□□ -1.26
SMC2-205ENST00000493955 HERC5Q9UII4 1024 aaKnown RBP7.17□□□□□ -1.26
SMC2-205ENST00000493955 MTO1Q9Y2Z2 717 aaKnown RBP7.17□□□□□ -1.26
SMC2-205ENST00000493955 A0A1B0GVC2 190 aa7.16□□□□□ -1.26
SMC2-205ENST00000493955 COQ9O75208 318 aa7.16□□□□□ -1.26
SMC2-205ENST00000493955 RAD17O75943 681 aa7.16□□□□□ -1.26
SMC2-205ENST00000493955 PECAM1P16284 738 aaPredicted RBP7.16□□□□□ -1.26
SMC2-205ENST00000493955 DDIT3P35638 169 aa7.16□□□□□ -1.26
SMC2-205ENST00000493955 ZNF134P52741 427 aa7.16□□□□□ -1.26
SMC2-205ENST00000493955 TBX2Q13207 712 aaPredicted RBP7.16□□□□□ -1.26
SMC2-205ENST00000493955 ZNF750Q32MQ0 723 aa7.16□□□□□ -1.26
SMC2-205ENST00000493955 ZIK1Q3SY52 487 aaPredicted RBP7.16□□□□□ -1.26
SMC2-205ENST00000493955 FAM102AQ5T9C2 384 aaPredicted RBP7.16□□□□□ -1.26
SMC2-205ENST00000493955 LCE4AQ5TA78 99 aa7.16□□□□□ -1.26
SMC2-205ENST00000493955 TSHZ3Q63HK5 1081 aa7.16□□□□□ -1.26
SMC2-205ENST00000493955 MZT2AQ6P582 158 aa7.16□□□□□ -1.26
SMC2-205ENST00000493955 POU5F2Q8N7G0 328 aa7.16□□□□□ -1.26
SMC2-205ENST00000493955 NAXEQ8NCW5 288 aa7.16□□□□□ -1.26
SMC2-205ENST00000493955 POC1BQ8TC44 478 aa7.16□□□□□ -1.26
SMC2-205ENST00000493955 BPIFB1Q8TDL5 484 aa7.16□□□□□ -1.26
SMC2-205ENST00000493955 RUBCNQ92622 972 aa7.16□□□□□ -1.26
SMC2-205ENST00000493955 NEU1Q99519 415 aa7.16□□□□□ -1.26
SMC2-205ENST00000493955 SLC46A2Q9BY10 475 aa7.16□□□□□ -1.26
SMC2-205ENST00000493955 SAYSD1Q9NPB0 183 aa7.16□□□□□ -1.26
SMC2-205ENST00000493955 TERF2IPQ9NYB0 399 aa7.16□□□□□ -1.26
SMC2-205ENST00000493955 SRP68Q9UHB9 627 aaKnown RBP7.16□□□□□ -1.26
SMC2-205ENST00000493955 HS3ST4Q9Y661 456 aa7.16□□□□□ -1.26
SMC2-205ENST00000493955 SOAT2O75908 522 aa7.15□□□□□ -1.27
SMC2-205ENST00000493955 RASAL1O95294 804 aa7.15□□□□□ -1.27
SMC2-205ENST00000493955 PYGLP06737 847 aa7.15□□□□□ -1.27
SMC2-205ENST00000493955 SPATA31D3P0C874 917 aa7.15□□□□□ -1.27
SMC2-205ENST00000493955 SLC5A2P31639 672 aa7.15□□□□□ -1.27
SMC2-205ENST00000493955 NHLH2Q02577 135 aa7.15□□□□□ -1.27
SMC2-205ENST00000493955 TRIM71Q2Q1W2 868 aaKnown RBP7.15□□□□□ -1.27
SMC2-205ENST00000493955 FBXO47Q5MNV8 452 aa7.15□□□□□ -1.27
SMC2-205ENST00000493955 METRNLQ641Q3 311 aa7.15□□□□□ -1.27
SMC2-205ENST00000493955 SPATA31D4Q6ZUB0 917 aa7.15□□□□□ -1.27
SMC2-205ENST00000493955 MOGAT3Q86VF5 341 aa7.15□□□□□ -1.27
SMC2-205ENST00000493955 ANKRD35Q8N283 1001 aa7.15□□□□□ -1.27
SMC2-205ENST00000493955 SPPL3Q8TCT6 385 aa7.15□□□□□ -1.27
SMC2-205ENST00000493955 LRIG1Q96JA1 1093 aa7.15□□□□□ -1.27
SMC2-205ENST00000493955 PPM1MQ96MI6 270 aa7.15□□□□□ -1.27
SMC2-205ENST00000493955 MED15Q96RN5 788 aa7.15□□□□□ -1.27
SMC2-205ENST00000493955 RNPEPQ9H4A4 650 aa7.15□□□□□ -1.27
SMC2-205ENST00000493955 VSX1Q9NZR4 365 aaPredicted RBP7.15□□□□□ -1.27
SMC2-205ENST00000493955 HPSEQ9Y251 543 aa7.15□□□□□ -1.27
SMC2-205ENST00000493955 DTNAQ9Y4J8 743 aa7.15□□□□□ -1.27
SMC2-205ENST00000493955 ADAMTS20P59510 1910 aa7.15□□□□□ -1.27
SMC2-205ENST00000493955 A0A0B4J269 797 aa7.14□□□□□ -1.27
SMC2-205ENST00000493955 FCHO1O14526 889 aa7.14□□□□□ -1.27
SMC2-205ENST00000493955 DGKEP52429 567 aa7.14□□□□□ -1.27
SMC2-205ENST00000493955 PKN1Q16512 942 aa7.14□□□□□ -1.27
SMC2-205ENST00000493955 ADCK5Q3MIX3 580 aa7.14□□□□□ -1.27
SMC2-205ENST00000493955 C1QL3Q5VWW1 255 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms