RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 SLC22A12Q96S37 553 aa13.51□□□□□ -0.25
HSPG2-212ENST00000493940 TRMT61BQ9BVS5 477 aaKnown RBP13.51□□□□□ -0.25
HSPG2-212ENST00000493940 CCL26Q9Y258 94 aa13.51□□□□□ -0.25
HSPG2-212ENST00000493940 EML5Q05BV3 1969 aa13.51□□□□□ -0.25
HSPG2-212ENST00000493940 KIAA1549LQ6ZVL6 1849 aa13.5□□□□□ -0.25
HSPG2-212ENST00000493940 FAM170BA6NMN3 283 aa13.5□□□□□ -0.25
HSPG2-212ENST00000493940 BDNFP23560 247 aa13.5□□□□□ -0.25
HSPG2-212ENST00000493940 SOX9P48436 509 aa13.5□□□□□ -0.25
HSPG2-212ENST00000493940 LHX1P48742 406 aa13.5□□□□□ -0.25
HSPG2-212ENST00000493940 USP46P62068 366 aa13.5□□□□□ -0.25
HSPG2-212ENST00000493940 MYL7Q01449 175 aa13.5□□□□□ -0.25
HSPG2-212ENST00000493940 TSPY1Q01534 308 aa13.5□□□□□ -0.25
HSPG2-212ENST00000493940 MYO1EQ12965 1108 aa13.5□□□□□ -0.25
HSPG2-212ENST00000493940 ANGPT1Q15389 498 aa13.5□□□□□ -0.25
HSPG2-212ENST00000493940 WDR72Q3MJ13 1102 aa13.5□□□□□ -0.25
HSPG2-212ENST00000493940 TXNDC8Q6A555 127 aa13.5□□□□□ -0.25
HSPG2-212ENST00000493940 TTC8Q8TAM2 541 aa13.5□□□□□ -0.25
HSPG2-212ENST00000493940 MYLPFQ96A32 169 aa13.5□□□□□ -0.25
HSPG2-212ENST00000493940 EEF2KMTQ96G04 330 aa13.5□□□□□ -0.25
HSPG2-212ENST00000493940 MMS19Q96T76 1030 aa13.5□□□□□ -0.25
HSPG2-212ENST00000493940 SYT15Q9BQS2 421 aa13.5□□□□□ -0.25
HSPG2-212ENST00000493940 SLITRK6Q9H5Y7 841 aa13.5□□□□□ -0.25
HSPG2-212ENST00000493940 TASP1Q9H6P5 420 aa13.5□□□□□ -0.25
HSPG2-212ENST00000493940 BRD9Q9H8M2 597 aa13.5□□□□□ -0.25
HSPG2-212ENST00000493940 LTB4R2Q9NPC1 389 aa13.5□□□□□ -0.25
HSPG2-212ENST00000493940 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.5□□□□□ -0.258e-7■■■■■ 45.7
HSPG2-212ENST00000493940 CGNQ9P2M7 1197 aaKnown RBP13.5□□□□□ -0.25
HSPG2-212ENST00000493940 NXF1Q9UBU9 619 aaKnown RBP13.5□□□□□ -0.25
HSPG2-212ENST00000493940 MAGED2Q9UNF1 606 aaPredicted RBP13.5□□□□□ -0.25
HSPG2-212ENST00000493940 TRAF3IP3Q9Y228 551 aa13.5□□□□□ -0.25
HSPG2-212ENST00000493940 ZNF292O60281 2723 aa13.5□□□□□ -0.25
HSPG2-212ENST00000493940 EP300Q09472 2414 aaPredicted RBP13.5□□□□□ -0.25
HSPG2-212ENST00000493940 MYO18AQ92614 2054 aaKnown RBP13.49□□□□□ -0.25
HSPG2-212ENST00000493940 SPTBN4Q9H254 2564 aa13.49□□□□□ -0.25
HSPG2-212ENST00000493940 SLC38A8A6NNN8 435 aa13.49□□□□□ -0.25
HSPG2-212ENST00000493940 CLDN5O00501 218 aa13.49□□□□□ -0.25
HSPG2-212ENST00000493940 AKAP3O75969 853 aa13.49□□□□□ -0.25
HSPG2-212ENST00000493940 NOL4O94818 638 aa13.49□□□□□ -0.25
HSPG2-212ENST00000493940 HOXC13P31276 330 aa13.49□□□□□ -0.25
HSPG2-212ENST00000493940 GNL1P36915 607 aaPredicted RBP13.49□□□□□ -0.25
HSPG2-212ENST00000493940 PRKCQQ04759 706 aa13.49□□□□□ -0.25
HSPG2-212ENST00000493940 TNK2Q07912 1038 aa13.49□□□□□ -0.25
HSPG2-212ENST00000493940 SMARCB1Q12824 385 aa13.49□□□□□ -0.25
HSPG2-212ENST00000493940 UBXN2BQ14CS0 331 aa13.49□□□□□ -0.25
HSPG2-212ENST00000493940 CFAP221Q4G0U5 840 aa13.49□□□□□ -0.25
HSPG2-212ENST00000493940 ZCWPW2Q504Y3 356 aa13.49□□□□□ -0.25
HSPG2-212ENST00000493940 SPOPLQ6IQ16 392 aa13.49□□□□□ -0.25
HSPG2-212ENST00000493940 PAQR9Q6ZVX9 377 aa13.49□□□□□ -0.25
HSPG2-212ENST00000493940 FRMD5Q7Z6J6 570 aa13.49□□□□□ -0.25
HSPG2-212ENST00000493940 ITIH5Q86UX2 942 aa13.49□□□□□ -0.25
HSPG2-212ENST00000493940 MAB21L3Q8N8X9 362 aa13.49□□□□□ -0.25
HSPG2-212ENST00000493940 SPATA18Q8TC71 538 aa13.49□□□□□ -0.25
HSPG2-212ENST00000493940 NKD2Q969F2 451 aaPredicted RBP13.49□□□□□ -0.25
HSPG2-212ENST00000493940 CHFRQ96EP1 664 aa13.49□□□□□ -0.25
HSPG2-212ENST00000493940 PCED1BQ96HM7 432 aa13.49□□□□□ -0.25
HSPG2-212ENST00000493940 CYP2S1Q96SQ9 504 aa13.49□□□□□ -0.25
HSPG2-212ENST00000493940 GPR88Q9GZN0 384 aa13.49□□□□□ -0.25
HSPG2-212ENST00000493940 SMYD3Q9H7B4 428 aa13.49□□□□□ -0.25
HSPG2-212ENST00000493940 CDH9Q9ULB4 789 aa13.49□□□□□ -0.25
HSPG2-212ENST00000493940 OTOL1A6NHN0 477 aaPredicted RBP13.48□□□□□ -0.25
HSPG2-212ENST00000493940 GADD45BO75293 160 aaPredicted RBP13.48□□□□□ -0.25
HSPG2-212ENST00000493940 TACC1O75410 805 aa13.48□□□□□ -0.25
HSPG2-212ENST00000493940 STAU1O95793 577 aaKnown RBP13.48□□□□□ -0.25
HSPG2-212ENST00000493940 MYL1P05976 194 aa13.48□□□□□ -0.25
HSPG2-212ENST00000493940 ZXDBP98169 803 aa13.48□□□□□ -0.25
HSPG2-212ENST00000493940 PFKPQ01813 784 aa13.48□□□□□ -0.25
HSPG2-212ENST00000493940 PPP3CAQ08209 521 aa13.48□□□□□ -0.25
HSPG2-212ENST00000493940 FCHO2Q0JRZ9 810 aa13.48□□□□□ -0.25
HSPG2-212ENST00000493940 KCNB1Q14721 858 aa13.48□□□□□ -0.25
HSPG2-212ENST00000493940 NFE2Q16621 373 aaPredicted RBP13.48□□□□□ -0.25
HSPG2-212ENST00000493940 MDH1BQ5I0G3 518 aa13.48□□□□□ -0.25
HSPG2-212ENST00000493940 CEP135Q66GS9 1140 aa13.48□□□□□ -0.25
HSPG2-212ENST00000493940 TXNDC11Q6PKC3 985 aa13.48□□□□□ -0.25
HSPG2-212ENST00000493940 SV2AQ7L0J3 742 aa13.48□□□□□ -0.25
HSPG2-212ENST00000493940 SPATA2LQ8IUW3 424 aaPredicted RBP13.48□□□□□ -0.25
HSPG2-212ENST00000493940 SCN4BQ8IWT1 228 aa13.48□□□□□ -0.25
HSPG2-212ENST00000493940 USP13Q92995 863 aaPredicted RBP13.48□□□□□ -0.25
HSPG2-212ENST00000493940 CLDN23Q96B33 292 aa13.48□□□□□ -0.25
HSPG2-212ENST00000493940 B3GNT5Q9BYG0 378 aa13.48□□□□□ -0.25
HSPG2-212ENST00000493940 ABCB6Q9NP58 842 aa13.48□□□□□ -0.25
HSPG2-212ENST00000493940 GTSE1Q9NYZ3 720 aa13.48□□□□□ -0.25
HSPG2-212ENST00000493940 ATP6V1DQ9Y5K8 247 aa13.48□□□□□ -0.25
HSPG2-212ENST00000493940 DCHS1Q96JQ0 3298 aa13.48□□□□□ -0.25
HSPG2-212ENST00000493940 OTOGLQ3ZCN5 2332 aa13.47□□□□□ -0.25
HSPG2-212ENST00000493940 ZNF263O14978 683 aa13.47□□□□□ -0.25
HSPG2-212ENST00000493940 TRIM49P0CI25 452 aa13.47□□□□□ -0.25
HSPG2-212ENST00000493940 TRIM49CP0CI26 452 aa13.47□□□□□ -0.25
HSPG2-212ENST00000493940 PTPN1P18031 435 aaKnown RBP13.47□□□□□ -0.25
HSPG2-212ENST00000493940 PCSK1P29120 753 aa13.47□□□□□ -0.25
HSPG2-212ENST00000493940 WEE1P30291 646 aa13.47□□□□□ -0.25
HSPG2-212ENST00000493940 PRCPP42785 496 aa13.47□□□□□ -0.25
HSPG2-212ENST00000493940 PMS1P54277 932 aaKnown RBP13.47□□□□□ -0.25
HSPG2-212ENST00000493940 CYP27A1Q02318 531 aa13.47□□□□□ -0.25
HSPG2-212ENST00000493940 ORC1Q13415 861 aa13.47□□□□□ -0.25
HSPG2-212ENST00000493940 NCOA4Q13772 614 aa13.47□□□□□ -0.25
HSPG2-212ENST00000493940 GAS6Q14393 721 aa13.47□□□□□ -0.25
HSPG2-212ENST00000493940 BECN1Q14457 450 aa13.47□□□□□ -0.25
HSPG2-212ENST00000493940 VEPH1Q14D04 833 aa13.47□□□□□ -0.25
HSPG2-212ENST00000493940 ZACNQ401N2 412 aa13.47□□□□□ -0.25
HSPG2-212ENST00000493940 SCARA5Q6ZMJ2 495 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms