RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 MAGEC2Q9UBF1 373 aaPredicted RBP24.16■■□□□ 1.46
SNIP1-203ENST00000493916 KRBA1A5PL33 1030 aa24.15■■□□□ 1.46
SNIP1-203ENST00000493916 A8MXQ7 604 aa24.15■■□□□ 1.46
SNIP1-203ENST00000493916 NOL4O94818 638 aa24.15■■□□□ 1.46
SNIP1-203ENST00000493916 CLSTN1O94985 981 aa24.15■■□□□ 1.46
SNIP1-203ENST00000493916 NPR3P17342 541 aa24.15■■□□□ 1.46
SNIP1-203ENST00000493916 CCNE1P24864 410 aa24.15■■□□□ 1.46
SNIP1-203ENST00000493916 AVPR2P30518 371 aa24.15■■□□□ 1.46
SNIP1-203ENST00000493916 CLCN5P51795 746 aa24.15■■□□□ 1.46
SNIP1-203ENST00000493916 PFKPQ01813 784 aa24.15■■□□□ 1.46
SNIP1-203ENST00000493916 MORC3Q14149 939 aa24.15■■□□□ 1.46
SNIP1-203ENST00000493916 DDR2Q16832 855 aa24.15■■□□□ 1.46
SNIP1-203ENST00000493916 ARHGAP15Q53QZ3 475 aa24.15■■□□□ 1.46
SNIP1-203ENST00000493916 MDH1BQ5I0G3 518 aa24.15■■□□□ 1.46
SNIP1-203ENST00000493916 STXBP5Q5T5C0 1151 aa24.15■■□□□ 1.46
SNIP1-203ENST00000493916 CWF19L1Q69YN2 538 aaKnown RBP24.15■■□□□ 1.46
SNIP1-203ENST00000493916 ASTLQ6HA08 431 aaPredicted RBP24.15■■□□□ 1.46
SNIP1-203ENST00000493916 VSTM1Q6UX27 236 aa24.15■■□□□ 1.46
SNIP1-203ENST00000493916 SCARA5Q6ZMJ2 495 aa24.15■■□□□ 1.46
SNIP1-203ENST00000493916 EEF2KMTQ96G04 330 aa24.15■■□□□ 1.46
SNIP1-203ENST00000493916 TRMT2BQ96GJ1 504 aaKnown RBP24.15■■□□□ 1.46
SNIP1-203ENST00000493916 PCED1BQ96HM7 432 aa24.15■■□□□ 1.46
SNIP1-203ENST00000493916 DPEP3Q9H4B8 488 aa24.15■■□□□ 1.46
SNIP1-203ENST00000493916 ARHGEF3Q9NR81 526 aa24.15■■□□□ 1.46
SNIP1-203ENST00000493916 CA14Q9ULX7 337 aa24.15■■□□□ 1.46
SNIP1-203ENST00000493916 WDFY4Q6ZS81 3184 aa24.15■■□□□ 1.46
SNIP1-203ENST00000493916 STX10O60499 249 aa24.14■■□□□ 1.45
SNIP1-203ENST00000493916 PTPN1P18031 435 aaKnown RBP24.14■■□□□ 1.45
SNIP1-203ENST00000493916 BMP6P22004 513 aa24.14■■□□□ 1.45
SNIP1-203ENST00000493916 WEE1P30291 646 aa24.14■■□□□ 1.45
SNIP1-203ENST00000493916 CDH8P55286 799 aa24.14■■□□□ 1.45
SNIP1-203ENST00000493916 CYP27A1Q02318 531 aa24.14■■□□□ 1.45
SNIP1-203ENST00000493916 SDHAF4Q5VUM1 108 aa24.14■■□□□ 1.45
SNIP1-203ENST00000493916 B3GALNT2Q8NCR0 500 aa24.14■■□□□ 1.45
SNIP1-203ENST00000493916 TAS1R2Q8TE23 839 aa24.14■■□□□ 1.45
SNIP1-203ENST00000493916 E2F7Q96AV8 911 aa24.14■■□□□ 1.45
SNIP1-203ENST00000493916 MYRFLQ96LU7 910 aa24.14■■□□□ 1.45
SNIP1-203ENST00000493916 IMPG2Q9BZV3 1241 aa24.14■■□□□ 1.45
SNIP1-203ENST00000493916 SDCBP2Q9H190 292 aa24.14■■□□□ 1.45
SNIP1-203ENST00000493916 ZMYM5Q9UJ78 669 aa24.14■■□□□ 1.45
SNIP1-203ENST00000493916 TRIM49BA6NDI0 452 aa24.13■■□□□ 1.45
SNIP1-203ENST00000493916 CD44P16070 742 aaKnown RBP24.13■■□□□ 1.45
SNIP1-203ENST00000493916 ASPAP45381 313 aa24.13■■□□□ 1.45
SNIP1-203ENST00000493916 RAP1GAPP47736 663 aa24.13■■□□□ 1.45
SNIP1-203ENST00000493916 NUBP1P53384 320 aa24.13■■□□□ 1.45
SNIP1-203ENST00000493916 NLRP12P59046 1061 aa24.13■■□□□ 1.45
SNIP1-203ENST00000493916 GPR158Q5T848 1215 aa24.13■■□□□ 1.45
SNIP1-203ENST00000493916 KRT39Q6A163 491 aa24.13■■□□□ 1.45
SNIP1-203ENST00000493916 ISM2Q6H9L7 571 aa24.13■■□□□ 1.45
SNIP1-203ENST00000493916 FOXR2Q6PJQ5 311 aa24.13■■□□□ 1.45
SNIP1-203ENST00000493916 VITQ6UXI7 678 aa24.13■■□□□ 1.45
SNIP1-203ENST00000493916 TMEM150AQ86TG1 271 aa24.13■■□□□ 1.45
SNIP1-203ENST00000493916 DEPDC1BQ8WUY9 529 aa24.13■■□□□ 1.45
SNIP1-203ENST00000493916 ELMO3Q96BJ8 720 aa24.13■■□□□ 1.45
SNIP1-203ENST00000493916 SPATA17Q96L03 361 aa24.13■■□□□ 1.45
SNIP1-203ENST00000493916 PRRX2Q99811 253 aa24.13■■□□□ 1.45
SNIP1-203ENST00000493916 TASP1Q9H6P5 420 aa24.13■■□□□ 1.45
SNIP1-203ENST00000493916 UXTQ9UBK9 157 aaPredicted RBP24.13■■□□□ 1.45
SNIP1-203ENST00000493916 PTPRDP23468 1912 aa24.13■■□□□ 1.45
SNIP1-203ENST00000493916 ZDBF2Q9HCK1 2354 aa24.12■■□□□ 1.45
SNIP1-203ENST00000493916 SLC38A8A6NNN8 435 aa24.12■■□□□ 1.45
SNIP1-203ENST00000493916 F11P03951 625 aa24.12■■□□□ 1.45
SNIP1-203ENST00000493916 BDNFP23560 247 aa24.12■■□□□ 1.45
SNIP1-203ENST00000493916 NOP14P78316 857 aaKnown RBP24.12■■□□□ 1.45
SNIP1-203ENST00000493916 CYP4F8P98187 520 aa24.12■■□□□ 1.45
SNIP1-203ENST00000493916 SPOPLQ6IQ16 392 aa24.12■■□□□ 1.45
SNIP1-203ENST00000493916 PHLDB3Q6NSJ2 640 aa24.12■■□□□ 1.45
SNIP1-203ENST00000493916 CLEC17AQ6ZS10 378 aa24.12■■□□□ 1.45
SNIP1-203ENST00000493916 SCN4BQ8IWT1 228 aa24.12■■□□□ 1.45
SNIP1-203ENST00000493916 TMEM105Q8N8V8 129 aa24.12■■□□□ 1.45
SNIP1-203ENST00000493916 STKLD1Q8NE28 680 aa24.12■■□□□ 1.45
SNIP1-203ENST00000493916 FLCNQ8NFG4 579 aa24.12■■□□□ 1.45
SNIP1-203ENST00000493916 TNIP3Q96KP6 325 aa24.12■■□□□ 1.45
SNIP1-203ENST00000493916 BCO2Q9BYV7 579 aa24.12■■□□□ 1.45
SNIP1-203ENST00000493916 ELOVL4Q9GZR5 314 aa24.12■■□□□ 1.45
SNIP1-203ENST00000493916 NUP210Q8TEM1 1887 aaPredicted RBP24.12■■□□□ 1.45
SNIP1-203ENST00000493916 NCANO14594 1321 aa24.11■■□□□ 1.45
SNIP1-203ENST00000493916 SOBPA7XYQ1 873 aa24.11■■□□□ 1.45
SNIP1-203ENST00000493916 PPP1R3GB7ZBB8 358 aa24.11■■□□□ 1.45
SNIP1-203ENST00000493916 TRIM66O15016 1216 aa24.11■■□□□ 1.45
SNIP1-203ENST00000493916 PSMC3P17980 439 aa24.11■■□□□ 1.45
SNIP1-203ENST00000493916 AOC1P19801 751 aa24.11■■□□□ 1.45
SNIP1-203ENST00000493916 DDX6P26196 483 aaKnown RBP eCLIP24.11■■□□□ 1.45
SNIP1-203ENST00000493916 VIPR2P41587 438 aa24.11■■□□□ 1.45
SNIP1-203ENST00000493916 MXI1P50539 228 aa24.11■■□□□ 1.45
SNIP1-203ENST00000493916 IER5LQ5T953 404 aa24.11■■□□□ 1.45
SNIP1-203ENST00000493916 ARID3BQ8IVW6 561 aaPredicted RBP24.11■■□□□ 1.45
SNIP1-203ENST00000493916 DNASE1L2Q92874 299 aa24.11■■□□□ 1.45
SNIP1-203ENST00000493916 CEP63Q96MT8 703 aa24.11■■□□□ 1.45
SNIP1-203ENST00000493916 TRMT61BQ9BVS5 477 aaKnown RBP24.11■■□□□ 1.45
SNIP1-203ENST00000493916 MMRN2Q9H8L6 949 aa24.11■■□□□ 1.45
SNIP1-203ENST00000493916 APOBEC3GQ9HC16 384 aaKnown RBP24.11■■□□□ 1.45
SNIP1-203ENST00000493916 MAGED2Q9UNF1 606 aaPredicted RBP24.11■■□□□ 1.45
SNIP1-203ENST00000493916 HEPACAM2A8MVW5 462 aa24.1■■□□□ 1.45
SNIP1-203ENST00000493916 GRIK1P39086 918 aa24.1■■□□□ 1.45
SNIP1-203ENST00000493916 GRM2Q14416 872 aa24.1■■□□□ 1.45
SNIP1-203ENST00000493916 MLF2Q15773 248 aaPredicted RBP24.1■■□□□ 1.45
SNIP1-203ENST00000493916 TTI2Q6NXR4 508 aa24.1■■□□□ 1.45
SNIP1-203ENST00000493916 UNC93AQ86WB7 457 aa24.1■■□□□ 1.45
SNIP1-203ENST00000493916 MFSD6LQ8IWD5 586 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms