RNA–Protein interactions for RNA: ENST00000493894.1

RHBDD3-206, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-206ENST00000493894 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.37■■□□□ 1.65
RHBDD3-206ENST00000493894 PVALEFA0A1B0GWK0 134 aa25.37■■□□□ 1.65
RHBDD3-206ENST00000493894 HCRTO43612 131 aa25.37■■□□□ 1.65
RHBDD3-206ENST00000493894 TNNI1P19237 187 aa25.37■■□□□ 1.65
RHBDD3-206ENST00000493894 AFMP43652 599 aa25.37■■□□□ 1.65
RHBDD3-206ENST00000493894 CCDC142Q17RM4 750 aa25.37■■□□□ 1.65
RHBDD3-206ENST00000493894 MAMSTRQ6ZN01 415 aa25.37■■□□□ 1.65
RHBDD3-206ENST00000493894 C4orf50Q6ZRC1 276 aa25.37■■□□□ 1.65
RHBDD3-206ENST00000493894 TRAPPC11Q7Z392 1133 aa25.37■■□□□ 1.65
RHBDD3-206ENST00000493894 CEP57L1Q8IYX8 460 aa25.37■■□□□ 1.65
RHBDD3-206ENST00000493894 MAB21L3Q8N8X9 362 aa25.37■■□□□ 1.65
RHBDD3-206ENST00000493894 XXYLT1Q8NBI6 393 aa25.37■■□□□ 1.65
RHBDD3-206ENST00000493894 SUMF1Q8NBK3 374 aa25.37■■□□□ 1.65
RHBDD3-206ENST00000493894 SPRYD3Q8NCJ5 442 aa25.37■■□□□ 1.65
RHBDD3-206ENST00000493894 TTC8Q8TAM2 541 aa25.37■■□□□ 1.65
RHBDD3-206ENST00000493894 KBTBD7Q8WVZ9 684 aa25.37■■□□□ 1.65
RHBDD3-206ENST00000493894 TRMT2BQ96GJ1 504 aaKnown RBP25.37■■□□□ 1.65
RHBDD3-206ENST00000493894 CGRRF1Q99675 332 aa25.37■■□□□ 1.65
RHBDD3-206ENST00000493894 SYT15Q9BQS2 421 aa25.37■■□□□ 1.65
RHBDD3-206ENST00000493894 DENND4CQ5VZ89 1909 aa25.36■■□□□ 1.65
RHBDD3-206ENST00000493894 SOBPA7XYQ1 873 aa25.36■■□□□ 1.65
RHBDD3-206ENST00000493894 CLIC2O15247 247 aa25.36■■□□□ 1.65
RHBDD3-206ENST00000493894 NOL4O94818 638 aa25.36■■□□□ 1.65
RHBDD3-206ENST00000493894 DNM1Q05193 864 aaKnown RBP25.36■■□□□ 1.65
RHBDD3-206ENST00000493894 CYP24A1Q07973 514 aa25.36■■□□□ 1.65
RHBDD3-206ENST00000493894 PSMD6Q15008 389 aa25.36■■□□□ 1.65
RHBDD3-206ENST00000493894 BMT2Q1RMZ1 405 aa25.36■■□□□ 1.65
RHBDD3-206ENST00000493894 LIMS2Q7Z4I7 341 aa25.36■■□□□ 1.65
RHBDD3-206ENST00000493894 MMS19Q96T76 1030 aa25.36■■□□□ 1.65
RHBDD3-206ENST00000493894 SLC39A2Q9NP94 309 aa25.36■■□□□ 1.65
RHBDD3-206ENST00000493894 CGNQ9P2M7 1197 aaKnown RBP25.36■■□□□ 1.65
RHBDD3-206ENST00000493894 CDH9Q9ULB4 789 aa25.36■■□□□ 1.65
RHBDD3-206ENST00000493894 LILRB5O75023 590 aa25.35■■□□□ 1.65
RHBDD3-206ENST00000493894 NRLP54845 237 aa25.35■■□□□ 1.65
RHBDD3-206ENST00000493894 PSMC1P62191 440 aaKnown RBP25.35■■□□□ 1.65
RHBDD3-206ENST00000493894 TNK2Q07912 1038 aa25.35■■□□□ 1.65
RHBDD3-206ENST00000493894 CUL4BQ13620 913 aa25.35■■□□□ 1.65
RHBDD3-206ENST00000493894 MAPRE1Q15691 268 aaKnown RBP25.35■■□□□ 1.65
RHBDD3-206ENST00000493894 ITPRIPL2Q3MIP1 535 aa25.35■■□□□ 1.65
RHBDD3-206ENST00000493894 TXNDC8Q6A555 127 aa25.35■■□□□ 1.65
RHBDD3-206ENST00000493894 TXNDC11Q6PKC3 985 aa25.35■■□□□ 1.65
RHBDD3-206ENST00000493894 SCN4BQ8IWT1 228 aa25.35■■□□□ 1.65
RHBDD3-206ENST00000493894 USP13Q92995 863 aaPredicted RBP25.35■■□□□ 1.65
RHBDD3-206ENST00000493894 CCDC127Q96BQ5 260 aa25.35■■□□□ 1.65
RHBDD3-206ENST00000493894 EPC1Q9H2F5 836 aa25.35■■□□□ 1.65
RHBDD3-206ENST00000493894 TDP1Q9NUW8 608 aa25.35■■□□□ 1.65
RHBDD3-206ENST00000493894 WARSP23381 471 aaKnown RBP25.34■■□□□ 1.65
RHBDD3-206ENST00000493894 MAGEA11P43364 429 aa25.34■■□□□ 1.65
RHBDD3-206ENST00000493894 DGKKQ5KSL6 1271 aa25.34■■□□□ 1.65
RHBDD3-206ENST00000493894 FAM171BQ6P995 826 aa25.34■■□□□ 1.65
RHBDD3-206ENST00000493894 MON1AQ86VX9 555 aa25.34■■□□□ 1.65
RHBDD3-206ENST00000493894 C12orf56Q8IXR9 622 aa25.34■■□□□ 1.65
RHBDD3-206ENST00000493894 KIAA2013Q8IYS2 634 aa25.34■■□□□ 1.65
RHBDD3-206ENST00000493894 MYLPFQ96A32 169 aa25.34■■□□□ 1.65
RHBDD3-206ENST00000493894 MYRFLQ96LU7 910 aa25.34■■□□□ 1.65
RHBDD3-206ENST00000493894 RBM12Q9NTZ6 932 aaKnown RBP25.34■■□□□ 1.65
RHBDD3-206ENST00000493894 NCDNQ9UBB6 729 aa25.34■■□□□ 1.65
RHBDD3-206ENST00000493894 CCL26Q9Y258 94 aa25.34■■□□□ 1.65
RHBDD3-206ENST00000493894 TADA3O75528 432 aa25.33■■□□□ 1.65
RHBDD3-206ENST00000493894 TDGF1P13385 188 aa25.33■■□□□ 1.65
RHBDD3-206ENST00000493894 LMO2P25791 158 aa25.33■■□□□ 1.65
RHBDD3-206ENST00000493894 ID4P47928 161 aa25.33■■□□□ 1.65
RHBDD3-206ENST00000493894 CXCL12P48061 93 aa25.33■■□□□ 1.65
RHBDD3-206ENST00000493894 PON2Q15165 354 aa25.33■■□□□ 1.65
RHBDD3-206ENST00000493894 KNOP1Q1ED39 458 aaKnown RBP25.33■■□□□ 1.65
RHBDD3-206ENST00000493894 GRAMD1CQ8IYS0 662 aa25.33■■□□□ 1.65
RHBDD3-206ENST00000493894 SPEM1Q8N4L4 309 aa25.33■■□□□ 1.65
RHBDD3-206ENST00000493894 MAGEC2Q9UBF1 373 aaPredicted RBP25.33■■□□□ 1.65
RHBDD3-206ENST00000493894 SERTAD1Q9UHV2 236 aa25.33■■□□□ 1.65
RHBDD3-206ENST00000493894 RCOR1Q9UKL0 485 aa25.33■■□□□ 1.65
RHBDD3-206ENST00000493894 SMG5Q9UPR3 1016 aaKnown RBP25.33■■□□□ 1.65
RHBDD3-206ENST00000493894 EP300Q09472 2414 aaPredicted RBP25.33■■□□□ 1.64
RHBDD3-206ENST00000493894 ATP2C2O75185 946 aa25.32■■□□□ 1.64
RHBDD3-206ENST00000493894 SLFN14P0C7P3 912 aa25.32■■□□□ 1.64
RHBDD3-206ENST00000493894 TNNC1P63316 161 aa25.32■■□□□ 1.64
RHBDD3-206ENST00000493894 SATB1Q01826 763 aa25.32■■□□□ 1.64
RHBDD3-206ENST00000493894 GAS6Q14393 721 aa25.32■■□□□ 1.64
RHBDD3-206ENST00000493894 ZNF268Q14587 947 aaPredicted RBP25.32■■□□□ 1.64
RHBDD3-206ENST00000493894 VSTM1Q6UX27 236 aa25.32■■□□□ 1.64
RHBDD3-206ENST00000493894 GOLGA5Q8TBA6 731 aa25.32■■□□□ 1.64
RHBDD3-206ENST00000493894 FAM83CQ9BQN1 747 aa25.32■■□□□ 1.64
RHBDD3-206ENST00000493894 SNX25Q9H3E2 840 aa25.32■■□□□ 1.64
RHBDD3-206ENST00000493894 TRPC7Q9HCX4 862 aa25.32■■□□□ 1.64
RHBDD3-206ENST00000493894 CRTAC1Q9NQ79 661 aa25.32■■□□□ 1.64
RHBDD3-206ENST00000493894 GKN1Q9NS71 199 aa25.32■■□□□ 1.64
RHBDD3-206ENST00000493894 EXOC1Q9NV70 894 aa25.32■■□□□ 1.64
RHBDD3-206ENST00000493894 OTOGLQ3ZCN5 2332 aa25.32■■□□□ 1.64
RHBDD3-206ENST00000493894 ZNF292O60281 2723 aa25.32■■□□□ 1.64
RHBDD3-206ENST00000493894 EXOC3O60645 756 aa25.31■■□□□ 1.64
RHBDD3-206ENST00000493894 PDGFRBP09619 1106 aa25.31■■□□□ 1.64
RHBDD3-206ENST00000493894 CYP27A1Q02318 531 aa25.31■■□□□ 1.64
RHBDD3-206ENST00000493894 TRPC3Q13507 836 aa25.31■■□□□ 1.64
RHBDD3-206ENST00000493894 CC2D1AQ6P1N0 951 aaPredicted RBP25.31■■□□□ 1.64
RHBDD3-206ENST00000493894 Q6ZS52 159 aa25.31■■□□□ 1.64
RHBDD3-206ENST00000493894 DCLK2Q8N568 766 aa25.31■■□□□ 1.64
RHBDD3-206ENST00000493894 FSIP1Q8NA03 581 aa25.31■■□□□ 1.64
RHBDD3-206ENST00000493894 SECISBP2LQ93073 1101 aaKnown RBP25.31■■□□□ 1.64
RHBDD3-206ENST00000493894 ZNF638Q14966 1978 aaKnown RBP25.31■■□□□ 1.64
RHBDD3-206ENST00000493894 TRAV19A0A0A6YYK7 116 aa25.3■■□□□ 1.64
RHBDD3-206ENST00000493894 ACTN4O43707 911 aaKnown RBP25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms