RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 GDPD5Q8WTR4 605 aa20.56■□□□□ 0.88
USP39-218ENST00000493829 SAMD11Q96NU1 681 aa20.56■□□□□ 0.88
USP39-218ENST00000493829 PKMYT1Q99640 499 aa20.56■□□□□ 0.88
USP39-218ENST00000493829 DESI2Q9BSY9 194 aa20.56■□□□□ 0.88
USP39-218ENST00000493829 B3GNT5Q9BYG0 378 aa20.56■□□□□ 0.88
USP39-218ENST00000493829 ZNF518BQ9C0D4 1074 aa20.56■□□□□ 0.88
USP39-218ENST00000493829 COLQQ9Y215 455 aaPredicted RBP20.56■□□□□ 0.88
USP39-218ENST00000493829 A0A087X0T9 212 aa20.55■□□□□ 0.88
USP39-218ENST00000493829 SSU72P8A0A1W2PR75 194 aa20.55■□□□□ 0.88
USP39-218ENST00000493829 FAM228BP0C875 321 aa20.55■□□□□ 0.88
USP39-218ENST00000493829 GPM6BQ13491 265 aa20.55■□□□□ 0.88
USP39-218ENST00000493829 FAM35AQ86V20 835 aa20.55■□□□□ 0.88
USP39-218ENST00000493829 ZNF677Q86XU0 584 aa20.55■□□□□ 0.88
USP39-218ENST00000493829 FUKQ8N0W3 1084 aa20.55■□□□□ 0.88
USP39-218ENST00000493829 TRIM44Q96DX7 344 aaPredicted RBP20.55■□□□□ 0.88
USP39-218ENST00000493829 TLR9Q9NR96 1032 aa20.55■□□□□ 0.88
USP39-218ENST00000493829 KRT82Q9NSB4 513 aa20.55■□□□□ 0.88
USP39-218ENST00000493829 ABI2Q9NYB9 513 aaPredicted RBP20.55■□□□□ 0.88
USP39-218ENST00000493829 KIAA1257Q9ULG3 409 aa20.55■□□□□ 0.88
USP39-218ENST00000493829 EPOPA6NHQ4 379 aa20.54■□□□□ 0.88
USP39-218ENST00000493829 RB1P06400 928 aa20.54■□□□□ 0.88
USP39-218ENST00000493829 CTSAP10619 480 aa20.54■□□□□ 0.88
USP39-218ENST00000493829 OR1D2P34982 312 aa20.54■□□□□ 0.88
USP39-218ENST00000493829 NAA35Q5VZE5 725 aa20.54■□□□□ 0.88
USP39-218ENST00000493829 TOGARAM2Q6ZUX3 1019 aa20.54■□□□□ 0.88
USP39-218ENST00000493829 DCP1BQ8IZD4 617 aaKnown RBP20.54■□□□□ 0.88
USP39-218ENST00000493829 C1orf131Q8NDD1 294 aaKnown RBP20.54■□□□□ 0.88
USP39-218ENST00000493829 TAS2R14Q9NYV8 317 aa20.54■□□□□ 0.88
USP39-218ENST00000493829 TBC1D4O60343 1298 aa20.54■□□□□ 0.88
USP39-218ENST00000493829 IRS1P35568 1242 aa20.54■□□□□ 0.88
USP39-218ENST00000493829 CYLC1P35663 651 aaPredicted RBP20.54■□□□□ 0.88
USP39-218ENST00000493829 SMAD3P84022 425 aaKnown RBP20.54■□□□□ 0.88
USP39-218ENST00000493829 ROR1Q01973 937 aa20.54■□□□□ 0.88
USP39-218ENST00000493829 ASTE1Q2TB18 679 aaPredicted RBP20.54■□□□□ 0.88
USP39-218ENST00000493829 ARHGAP17Q68EM7 881 aa20.54■□□□□ 0.88
USP39-218ENST00000493829 FAM171BQ6P995 826 aa20.54■□□□□ 0.88
USP39-218ENST00000493829 RNF19BQ6ZMZ0 732 aa20.54■□□□□ 0.88
USP39-218ENST00000493829 TTC30AQ86WT1 665 aa20.54■□□□□ 0.88
USP39-218ENST00000493829 SPATA2LQ8IUW3 424 aaPredicted RBP20.54■□□□□ 0.88
USP39-218ENST00000493829 ACRBPQ8NEB7 543 aa20.54■□□□□ 0.88
USP39-218ENST00000493829 MICAL1Q8TDZ2 1067 aa20.54■□□□□ 0.88
USP39-218ENST00000493829 CPA5Q8WXQ8 436 aa20.54■□□□□ 0.88
USP39-218ENST00000493829 SECISBP2LQ93073 1101 aaKnown RBP20.54■□□□□ 0.88
USP39-218ENST00000493829 CLSTN3Q9BQT9 956 aa20.54■□□□□ 0.88
USP39-218ENST00000493829 HESX1Q9UBX0 185 aa20.54■□□□□ 0.88
USP39-218ENST00000493829 STK39Q9UEW8 545 aa20.54■□□□□ 0.88
USP39-218ENST00000493829 LZTS1Q9Y250 596 aa20.54■□□□□ 0.88
USP39-218ENST00000493829 BACE2Q9Y5Z0 518 aa20.54■□□□□ 0.88
USP39-218ENST00000493829 ARHGAP6O43182 974 aa20.53■□□□□ 0.88
USP39-218ENST00000493829 NDUFA10O95299 355 aa20.53■□□□□ 0.88
USP39-218ENST00000493829 CXCL14O95715 111 aa20.53■□□□□ 0.88
USP39-218ENST00000493829 BDNFP23560 247 aa20.53■□□□□ 0.88
USP39-218ENST00000493829 BMS1Q14692 1282 aaKnown RBP20.53■□□□□ 0.88
USP39-218ENST00000493829 CNGA2Q16280 664 aa20.53■□□□□ 0.88
USP39-218ENST00000493829 LCLAT1Q6UWP7 414 aa20.53■□□□□ 0.88
USP39-218ENST00000493829 PAQR9Q6ZVX9 377 aa20.53■□□□□ 0.88
USP39-218ENST00000493829 SLC30A5Q8TAD4 765 aa20.53■□□□□ 0.88
USP39-218ENST00000493829 HNRNPABQ99729 332 aaKnown RBP20.53■□□□□ 0.88
USP39-218ENST00000493829 PCDHGC3Q9UN70 934 aa20.53■□□□□ 0.88
USP39-218ENST00000493829 WDR27A2RRH5 827 aa20.52■□□□□ 0.88
USP39-218ENST00000493829 HIDE1A8MVS5 230 aa20.52■□□□□ 0.88
USP39-218ENST00000493829 H3BNC9 293 aa20.52■□□□□ 0.88
USP39-218ENST00000493829 RFXAPO00287 272 aa20.52■□□□□ 0.88
USP39-218ENST00000493829 CACNA2D1P54289 1103 aa20.52■□□□□ 0.88
USP39-218ENST00000493829 MAPRE1Q15691 268 aaKnown RBP20.52■□□□□ 0.88
USP39-218ENST00000493829 SLC18A3Q16572 532 aa20.52■□□□□ 0.88
USP39-218ENST00000493829 CLEC16AQ2KHT3 1053 aa20.52■□□□□ 0.88
USP39-218ENST00000493829 CCDC170Q8IYT3 715 aa20.52■□□□□ 0.88
USP39-218ENST00000493829 TTC9BQ8N6N2 239 aa20.52■□□□□ 0.88
USP39-218ENST00000493829 ATAD1Q8NBU5 361 aa20.52■□□□□ 0.88
USP39-218ENST00000493829 PYCARDQ9ULZ3 195 aa20.52■□□□□ 0.88
USP39-218ENST00000493829 CEP83Q9Y592 693 aa20.52■□□□□ 0.88
USP39-218ENST00000493829 EPN1Q9Y6I3 576 aaPredicted RBP20.52■□□□□ 0.88
USP39-218ENST00000493829 TULP2O00295 520 aa20.51■□□□□ 0.87
USP39-218ENST00000493829 ZNF263O14978 683 aa20.51■□□□□ 0.87
USP39-218ENST00000493829 TEX28O15482 410 aa20.51■□□□□ 0.87
USP39-218ENST00000493829 AP1G2O75843 785 aa20.51■□□□□ 0.87
USP39-218ENST00000493829 CNPP09543 421 aaKnown RBP20.51■□□□□ 0.87
USP39-218ENST00000493829 FAM200BP0CF97 657 aa20.51■□□□□ 0.87
USP39-218ENST00000493829 NOMO3P69849 1222 aa20.51■□□□□ 0.87
USP39-218ENST00000493829 UBE3AQ05086 875 aa20.51■□□□□ 0.87
USP39-218ENST00000493829 CAMK1Q14012 370 aa20.51■□□□□ 0.87
USP39-218ENST00000493829 SMC1AQ14683 1233 aaKnown RBP20.51■□□□□ 0.87
USP39-218ENST00000493829 STILQ15468 1287 aa20.51■□□□□ 0.87
USP39-218ENST00000493829 C2CD6Q53TS8 623 aa20.51■□□□□ 0.87
USP39-218ENST00000493829 CCDC122Q5T0U0 273 aa20.51■□□□□ 0.87
USP39-218ENST00000493829 SMYD5Q6GMV2 418 aa20.51■□□□□ 0.87
USP39-218ENST00000493829 SLC8B1Q6J4K2 584 aa20.51■□□□□ 0.87
USP39-218ENST00000493829 C4orf50Q6ZRC1 276 aa20.51■□□□□ 0.87
USP39-218ENST00000493829 TMEM30AQ9NV96 361 aa20.51■□□□□ 0.87
USP39-218ENST00000493829 PTPRDP23468 1912 aa20.51■□□□□ 0.87
USP39-218ENST00000493829 ATP8B3O60423 1300 aa20.51■□□□□ 0.87
USP39-218ENST00000493829 MTMR11A4FU01 709 aa20.51■□□□□ 0.87
USP39-218ENST00000493829 PIK3R2O00459 728 aa20.51■□□□□ 0.87
USP39-218ENST00000493829 SOAT2O75908 522 aa20.51■□□□□ 0.87
USP39-218ENST00000493829 BEST1O76090 585 aa20.51■□□□□ 0.87
USP39-218ENST00000493829 CYP2F1P24903 491 aa20.51■□□□□ 0.87
USP39-218ENST00000493829 RGS7P49802 495 aa20.51■□□□□ 0.87
USP39-218ENST00000493829 BCAT1P54687 386 aa20.51■□□□□ 0.87
USP39-218ENST00000493829 MAP3K7CLP57077 242 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms