RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 GOLGA8IPA6NC78 632 aa13.09□□□□□ -0.31
UPF3A-210ENST00000493727 GOLGA8JA6NMD2 632 aa13.09□□□□□ -0.31
UPF3A-210ENST00000493727 SLC16A3O15427 465 aaKnown RBP13.09□□□□□ -0.31
UPF3A-210ENST00000493727 TEX28O15482 410 aa13.09□□□□□ -0.31
UPF3A-210ENST00000493727 EXTL3O43909 919 aa13.09□□□□□ -0.31
UPF3A-210ENST00000493727 GNA14O95837 355 aa13.09□□□□□ -0.31
UPF3A-210ENST00000493727 LDHAP00338 332 aaKnown RBP13.09□□□□□ -0.31
UPF3A-210ENST00000493727 TPM2P07951 284 aa13.09□□□□□ -0.31
UPF3A-210ENST00000493727 MCF2P10911 925 aa13.09□□□□□ -0.31
UPF3A-210ENST00000493727 ADSSP30520 456 aa13.09□□□□□ -0.31
UPF3A-210ENST00000493727 PSMC2P35998 433 aaKnown RBP13.09□□□□□ -0.31
UPF3A-210ENST00000493727 MTIF2P46199 727 aaKnown RBP13.09□□□□□ -0.31
UPF3A-210ENST00000493727 SPAG1Q07617 926 aa13.09□□□□□ -0.31
UPF3A-210ENST00000493727 MCL1Q07820 350 aa13.09□□□□□ -0.31
UPF3A-210ENST00000493727 TDGQ13569 410 aa13.09□□□□□ -0.31
UPF3A-210ENST00000493727 ANGPT1Q15389 498 aa13.09□□□□□ -0.31
UPF3A-210ENST00000493727 KIAA0319Q5VV43 1072 aa13.09□□□□□ -0.31
UPF3A-210ENST00000493727 FUT10Q6P4F1 479 aa13.09□□□□□ -0.31
UPF3A-210ENST00000493727 C12orf56Q8IXR9 622 aa13.09□□□□□ -0.31
UPF3A-210ENST00000493727 FAM186BQ8IYM0 893 aa13.09□□□□□ -0.31
UPF3A-210ENST00000493727 GPD1LQ8N335 351 aa13.09□□□□□ -0.31
UPF3A-210ENST00000493727 DTWD2Q8NBA8 298 aa13.09□□□□□ -0.31
UPF3A-210ENST00000493727 DOCK6Q96HP0 2047 aa13.09□□□□□ -0.31
UPF3A-210ENST00000493727 RTP3Q9BQQ7 232 aa13.09□□□□□ -0.31
UPF3A-210ENST00000493727 FAM213AQ9BRX8 229 aa13.09□□□□□ -0.31
UPF3A-210ENST00000493727 CDT1Q9H211 546 aa13.09□□□□□ -0.31
UPF3A-210ENST00000493727 KCNK12Q9HB15 430 aa13.09□□□□□ -0.31
UPF3A-210ENST00000493727 KIAA1586Q9HCI6 787 aa13.09□□□□□ -0.31
UPF3A-210ENST00000493727 CHST7Q9NS84 486 aa13.09□□□□□ -0.31
UPF3A-210ENST00000493727 MIOSQ9NXC5 875 aa13.09□□□□□ -0.31
UPF3A-210ENST00000493727 FNIP2Q9P278 1114 aa13.09□□□□□ -0.31
UPF3A-210ENST00000493727 IGSF9Q9P2J2 1179 aa13.09□□□□□ -0.31
UPF3A-210ENST00000493727 PARP2Q9UGN5 583 aa13.09□□□□□ -0.31
UPF3A-210ENST00000493727 ADAM28Q9UKQ2 775 aa13.09□□□□□ -0.31
UPF3A-210ENST00000493727 SF3B1O75533 1304 aaKnown RBP eCLIP13.09□□□□□ -0.31
UPF3A-210ENST00000493727 CITO14578 2027 aa13.08□□□□□ -0.31
UPF3A-210ENST00000493727 A0A0B4J269 797 aa13.08□□□□□ -0.32
UPF3A-210ENST00000493727 KCNJ18B7U540 433 aa13.08□□□□□ -0.32
UPF3A-210ENST00000493727 PES1O00541 588 aaKnown RBP13.08□□□□□ -0.32
UPF3A-210ENST00000493727 OGTO15294 1046 aa13.08□□□□□ -0.32
UPF3A-210ENST00000493727 N4BP1O75113 896 aaKnown RBP13.08□□□□□ -0.32
UPF3A-210ENST00000493727 TADA2AO75478 443 aa13.08□□□□□ -0.32
UPF3A-210ENST00000493727 PAPLNO95428 1278 aa13.08□□□□□ -0.32
UPF3A-210ENST00000493727 KRT13P13646 458 aa13.08□□□□□ -0.32
UPF3A-210ENST00000493727 PROZP22891 400 aa13.08□□□□□ -0.32
UPF3A-210ENST00000493727 AKAP5P24588 427 aa13.08□□□□□ -0.32
UPF3A-210ENST00000493727 ELAVL2Q12926 359 aaKnown RBP13.08□□□□□ -0.32
UPF3A-210ENST00000493727 TUSC3Q13454 348 aa13.08□□□□□ -0.32
UPF3A-210ENST00000493727 KCNJ12Q14500 433 aa13.08□□□□□ -0.32
UPF3A-210ENST00000493727 KYAT1Q16773 422 aa13.08□□□□□ -0.32
UPF3A-210ENST00000493727 FILIP1Q7Z7B0 1213 aa13.08□□□□□ -0.32
UPF3A-210ENST00000493727 ZC3H3Q8IXZ2 948 aaKnown RBP13.08□□□□□ -0.32
UPF3A-210ENST00000493727 GSTCDQ8NEC7 633 aa13.08□□□□□ -0.32
UPF3A-210ENST00000493727 NXPE3Q969Y0 559 aa13.08□□□□□ -0.32
UPF3A-210ENST00000493727 MKNK1Q9BUB5 465 aa13.08□□□□□ -0.32
UPF3A-210ENST00000493727 TSPAN10Q9H1Z9 355 aaPredicted RBP13.08□□□□□ -0.32
UPF3A-210ENST00000493727 WDR6Q9NNW5 1121 aaKnown RBP13.08□□□□□ -0.32
UPF3A-210ENST00000493727 DMAC2Q9NW81 257 aa13.08□□□□□ -0.32
UPF3A-210ENST00000493727 CUEDC1Q9NWM3 386 aaPredicted RBP13.08□□□□□ -0.32
UPF3A-210ENST00000493727 ZDHHC7Q9NXF8 308 aa13.08□□□□□ -0.32
UPF3A-210ENST00000493727 STYXL1Q9Y6J8 313 aa13.08□□□□□ -0.32
UPF3A-210ENST00000493727 CCDC195A0A1B0GUA6 201 aa13.07□□□□□ -0.32
UPF3A-210ENST00000493727 ZNF233A6NK53 670 aa13.07□□□□□ -0.32
UPF3A-210ENST00000493727 NARSO43776 548 aaKnown RBP13.07□□□□□ -0.32
UPF3A-210ENST00000493727 AKAP3O75969 853 aa13.07□□□□□ -0.32
UPF3A-210ENST00000493727 WFS1O76024 890 aa13.07□□□□□ -0.32
UPF3A-210ENST00000493727 SERPINC1P01008 464 aa13.07□□□□□ -0.32
UPF3A-210ENST00000493727 EEF1GP26641 437 aaKnown RBP13.07□□□□□ -0.32
UPF3A-210ENST00000493727 PLA2G4AP47712 749 aa13.07□□□□□ -0.32
UPF3A-210ENST00000493727 CASP4P49662 377 aa13.07□□□□□ -0.32
UPF3A-210ENST00000493727 OSTNP61366 133 aa13.07□□□□□ -0.32
UPF3A-210ENST00000493727 SNRNP35Q16560 246 aaKnown RBP13.07□□□□□ -0.32
UPF3A-210ENST00000493727 TBCELQ5QJ74 424 aa13.07□□□□□ -0.32
UPF3A-210ENST00000493727 CDKAL1Q5VV42 579 aa13.07□□□□□ -0.32
UPF3A-210ENST00000493727 PDXDC1Q6P996 788 aa13.07□□□□□ -0.32
UPF3A-210ENST00000493727 TAS1R1Q7RTX1 841 aa13.07□□□□□ -0.32
UPF3A-210ENST00000493727 ZDHHC1Q8WTX9 485 aa13.07□□□□□ -0.32
UPF3A-210ENST00000493727 SMG7Q92540 1137 aaKnown RBP13.07□□□□□ -0.32
UPF3A-210ENST00000493727 CCDC94Q9BW85 323 aaPredicted RBP13.07□□□□□ -0.32
UPF3A-210ENST00000493727 HAPLN2Q9GZV7 340 aa13.07□□□□□ -0.32
UPF3A-210ENST00000493727 METTL14Q9HCE5 456 aaKnown RBP13.07□□□□□ -0.32
UPF3A-210ENST00000493727 PTPRHQ9HD43 1115 aa13.07□□□□□ -0.32
UPF3A-210ENST00000493727 RBAKQ9NYW8 714 aaPredicted RBP13.07□□□□□ -0.32
UPF3A-210ENST00000493727 ARMCX3Q9UH62 379 aaPredicted RBP13.07□□□□□ -0.32
UPF3A-210ENST00000493727 CLUHO75153 1309 aa13.07□□□□□ -0.32
UPF3A-210ENST00000493727 ACACBO00763 2458 aa13.06□□□□□ -0.32
UPF3A-210ENST00000493727 VWA8A3KMH1 1905 aa13.06□□□□□ -0.32
UPF3A-210ENST00000493727 A0A1B0GTH6 734 aa13.06□□□□□ -0.32
UPF3A-210ENST00000493727 KRBA1A5PL33 1030 aa13.06□□□□□ -0.32
UPF3A-210ENST00000493727 ABLIM1O14639 778 aa13.06□□□□□ -0.32
UPF3A-210ENST00000493727 THP07101 528 aa13.06□□□□□ -0.32
UPF3A-210ENST00000493727 VSIG8P0DPA2 414 aa13.06□□□□□ -0.32
UPF3A-210ENST00000493727 ZNF18P17022 549 aa13.06□□□□□ -0.32
UPF3A-210ENST00000493727 GBP2P32456 591 aaPredicted RBP13.06□□□□□ -0.32
UPF3A-210ENST00000493727 ACOT2P49753 483 aa13.06□□□□□ -0.32
UPF3A-210ENST00000493727 YARSP54577 528 aaKnown RBP13.06□□□□□ -0.32
UPF3A-210ENST00000493727 UVSSAQ2YD98 709 aa13.06□□□□□ -0.32
UPF3A-210ENST00000493727 SEZ6Q53EL9 994 aa13.06□□□□□ -0.32
UPF3A-210ENST00000493727 TCP11X2Q5H9J9 407 aa13.06□□□□□ -0.32
UPF3A-210ENST00000493727 DCAF17Q5H9S7 520 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms