RNA–Protein interactions for RNA: ENST00000493660.5

SMARCE1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-211ENST00000493660 FAM126BQ8IXS8 530 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 PEX5LQ8IYB4 626 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 RIN2Q8WYP3 895 aaPredicted RBP7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 SEMA4DQ92854 862 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 SNX27Q96L92 541 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 CCT8L2Q96SF2 557 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 NAP1L3Q99457 506 aaPredicted RBP7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 NDNQ99608 321 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 IMPG2Q9BZV3 1241 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 ST3GAL5Q9UNP4 418 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 SH3GLB1Q9Y371 365 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 ATP8B3O60423 1300 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 TDRD15B5MCY1 1934 aaKnown RBP7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 SOWAHDA6NJG2 315 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 XPOTO43592 962 aaKnown RBP7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 DIAPH2O60879 1101 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 STAU1O95793 577 aaKnown RBP7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 CTSHP09668 335 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 CKBP12277 381 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 SKIP12755 728 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 ATICP31939 592 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 NSUN2Q08J23 767 aaKnown RBP eCLIP7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 PAK2Q13177 524 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 NCOA4Q13772 614 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 DSC3Q14574 896 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 LPIN1Q14693 890 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 DRAP1Q14919 205 aaPredicted RBP7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 TMEM132DQ14C87 1099 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 IFI16Q16666 785 aaKnown RBP7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 HGSNATQ68CP4 663 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 THOC7Q6I9Y2 204 aaKnown RBP7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 PACS1Q6VY07 963 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 RAD9BQ6WBX8 426 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 TRAPPC11Q7Z392 1133 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 ARHGEF19Q8IW93 802 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 SLC15A3Q8IY34 581 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 TMEM192Q8IY95 271 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 LRRC43Q8N309 656 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 ARHGAP18Q8N392 663 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 OR5B17Q8NGF7 314 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 HELQQ8TDG4 1101 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 EIF2AQ9BY44 585 aaKnown RBP7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 FAM124BQ9H5Z6 455 aaPredicted RBP7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 VRTNQ9H8Y1 702 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 UBE2TQ9NPD8 197 aaPredicted RBP7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 UBAP1Q9NZ09 502 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 CNTN3Q9P232 1028 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 AJAP1Q9UKB5 411 aaPredicted RBP7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 ITGA11Q9UKX5 1188 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 N6AMT1Q9Y5N5 214 aa7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 EPN1Q9Y6I3 576 aaPredicted RBP7.64□□□□□ -1.19
SMARCE1-211ENST00000493660 CTAGE9A4FU28 777 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 PITPNM1O00562 1244 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 PFDN1O60925 122 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 NDUFA10O95299 355 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 LCA5LO95447 670 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 PARNO95453 639 aaKnown RBP7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 ASS1P00966 412 aaKnown RBP7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 GSTA2P09210 222 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 HSPA1AP0DMV8 641 aaKnown RBP7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 HSPA1BP0DMV9 641 aaKnown RBP7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 KCNE1P15382 129 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 OSTNP61366 133 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 KRT83P78385 493 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 APBA1Q02410 837 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 SULT2A1Q06520 285 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 TRPC3Q13507 836 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 ZNF618Q5T7W0 954 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 LMBRD2Q68DH5 695 aaPredicted RBP7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 TWF2Q6IBS0 349 aaKnown RBP7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 JADE1Q6IE81 842 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 GJB7Q6PEY0 223 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 TRAF7Q6Q0C0 670 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 ALKAL1Q6UXT8 129 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 ZNF662Q6ZS27 426 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 ANKRD33Q7Z3H0 272 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 IRF2BP2Q7Z5L9 587 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 MRPL10Q7Z7H8 261 aaKnown RBP7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 U2AF1L4Q8WU68 220 aaKnown RBP7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 SHC3Q92529 594 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 NACC2Q96BF6 587 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 RPGRIP1Q96KN7 1286 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 CHP1Q99653 195 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 OSBPL7Q9BZF2 842 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 MTMR12Q9C0I1 747 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 GPR88Q9GZN0 384 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 TRPV6Q9H1D0 765 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 VCXQ9H320 206 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 NHEJ1Q9H9Q4 299 aaPredicted RBP7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 PIDD1Q9HB75 910 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 SNTG2Q9NY99 539 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 ARHGAP20Q9P2F6 1191 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 CTNNAL1Q9UBT7 734 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 IPPQ9Y573 584 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 RBAK-RBAKDNI3L0D1 243 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 ATP9BO43861 1147 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 ZNF623O75123 536 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 RECQL4O94761 1208 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 NFICP08651 508 aa7.63□□□□□ -1.19
SMARCE1-211ENST00000493660 NAT2P11245 290 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms