RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 ABCB4P21439 1286 aa10.67□□□□□ -0.7
PRPF3-206ENST00000493553 AXLP30530 894 aa10.67□□□□□ -0.7
PRPF3-206ENST00000493553 POLR2BP30876 1174 aaKnown RBP10.67□□□□□ -0.7
PRPF3-206ENST00000493553 RGS2P41220 211 aa10.67□□□□□ -0.7
PRPF3-206ENST00000493553 EPHB4P54760 987 aa10.67□□□□□ -0.7
PRPF3-206ENST00000493553 FMO1Q01740 532 aa10.67□□□□□ -0.7
PRPF3-206ENST00000493553 MLLT1Q03111 559 aaPredicted RBP10.67□□□□□ -0.7
PRPF3-206ENST00000493553 PLAURQ03405 335 aa10.67□□□□□ -0.7
PRPF3-206ENST00000493553 MBTD1Q05BQ5 628 aa10.67□□□□□ -0.7
PRPF3-206ENST00000493553 SUZ12Q15022 739 aaKnown RBP10.67□□□□□ -0.7
PRPF3-206ENST00000493553 TAF1CQ15572 869 aaPredicted RBP10.67□□□□□ -0.7
PRPF3-206ENST00000493553 ELMSAN1Q6PJG2 1045 aa10.67□□□□□ -0.7
PRPF3-206ENST00000493553 MTHFD1LQ6UB35 978 aa10.67□□□□□ -0.7
PRPF3-206ENST00000493553 SLC47A2Q86VL8 602 aa10.67□□□□□ -0.7
PRPF3-206ENST00000493553 LRRC71Q8N4P6 559 aa10.67□□□□□ -0.7
PRPF3-206ENST00000493553 ZSWIM2Q8NEG5 633 aa10.67□□□□□ -0.7
PRPF3-206ENST00000493553 ZNF653Q96CK0 615 aa10.67□□□□□ -0.7
PRPF3-206ENST00000493553 SCLT1Q96NL6 688 aa10.67□□□□□ -0.7
PRPF3-206ENST00000493553 C16orf70Q9BSU1 422 aa10.67□□□□□ -0.7
PRPF3-206ENST00000493553 FUT8Q9BYC5 575 aa10.67□□□□□ -0.7
PRPF3-206ENST00000493553 GCOM2Q9BZD3 368 aaPredicted RBP10.67□□□□□ -0.7
PRPF3-206ENST00000493553 FAM129AQ9BZQ8 928 aa10.67□□□□□ -0.7
PRPF3-206ENST00000493553 THAP2Q9H0W7 228 aa10.67□□□□□ -0.7
PRPF3-206ENST00000493553 ZFYVE28Q9HCC9 887 aa10.67□□□□□ -0.7
PRPF3-206ENST00000493553 PDGFCQ9NRA1 345 aa10.67□□□□□ -0.7
PRPF3-206ENST00000493553 TOPORSQ9NS56 1045 aaPredicted RBP10.67□□□□□ -0.7
PRPF3-206ENST00000493553 HOMER3Q9NSC5 361 aa10.67□□□□□ -0.7
PRPF3-206ENST00000493553 ZNF446Q9NWS9 450 aa10.67□□□□□ -0.7
PRPF3-206ENST00000493553 FEZ2Q9UHY8 353 aaPredicted RBP10.67□□□□□ -0.7
PRPF3-206ENST00000493553 TMEM59LQ9UK28 342 aa10.67□□□□□ -0.7
PRPF3-206ENST00000493553 KIAA1257Q9ULG3 409 aa10.67□□□□□ -0.7
PRPF3-206ENST00000493553 AKT3Q9Y243 479 aa10.67□□□□□ -0.7
PRPF3-206ENST00000493553 FAM229AH3BQW9 127 aa10.66□□□□□ -0.7
PRPF3-206ENST00000493553 KRIT1O00522 736 aa10.66□□□□□ -0.7
PRPF3-206ENST00000493553 FAM189A1O60320 539 aa10.66□□□□□ -0.7
PRPF3-206ENST00000493553 TBC1D8O95759 1140 aa10.66□□□□□ -0.7
PRPF3-206ENST00000493553 MMP3P08254 477 aa10.66□□□□□ -0.7
PRPF3-206ENST00000493553 PAEPP09466 180 aa10.66□□□□□ -0.7
PRPF3-206ENST00000493553 CTNNA2P26232 953 aa10.66□□□□□ -0.7
PRPF3-206ENST00000493553 MAN1A1P33908 653 aa10.66□□□□□ -0.7
PRPF3-206ENST00000493553 ADCYAP1R1P41586 468 aa10.66□□□□□ -0.7
PRPF3-206ENST00000493553 ZNF157P51786 506 aaPredicted RBP10.66□□□□□ -0.7
PRPF3-206ENST00000493553 SNX16P57768 344 aa10.66□□□□□ -0.7
PRPF3-206ENST00000493553 VSNL1P62760 191 aa10.66□□□□□ -0.7
PRPF3-206ENST00000493553 GRIK4Q16099 956 aa10.66□□□□□ -0.7
PRPF3-206ENST00000493553 ZNF699Q32M78 642 aa10.66□□□□□ -0.7
PRPF3-206ENST00000493553 SEL1L2Q5TEA6 688 aa10.66□□□□□ -0.7
PRPF3-206ENST00000493553 PHF13Q86YI8 300 aaPredicted RBP10.66□□□□□ -0.7
PRPF3-206ENST00000493553 NME8Q8N427 588 aa10.66□□□□□ -0.7
PRPF3-206ENST00000493553 RBBP8NLQ8NC74 664 aaPredicted RBP10.66□□□□□ -0.7
PRPF3-206ENST00000493553 OLIG1Q8TAK6 271 aa10.66□□□□□ -0.7
PRPF3-206ENST00000493553 ZNF564Q8TBZ8 553 aaPredicted RBP10.66□□□□□ -0.7
PRPF3-206ENST00000493553 SLC20A1Q8WUM9 679 aa10.66□□□□□ -0.7
PRPF3-206ENST00000493553 DDX1Q92499 740 aaKnown RBP10.66□□□□□ -0.7
PRPF3-206ENST00000493553 COPS5Q92905 334 aa10.66□□□□□ -0.7
PRPF3-206ENST00000493553 ZBTB45Q96K62 511 aaPredicted RBP10.66□□□□□ -0.7
PRPF3-206ENST00000493553 PNKPQ96T60 521 aa10.66□□□□□ -0.7
PRPF3-206ENST00000493553 RNPEPQ9H4A4 650 aa10.66□□□□□ -0.7
PRPF3-206ENST00000493553 RASAL2Q9UJF2 1139 aa10.66□□□□□ -0.7
PRPF3-206ENST00000493553 ZHX1Q9UKY1 873 aaPredicted RBP10.66□□□□□ -0.7
PRPF3-206ENST00000493553 STRIP2Q9ULQ0 834 aa10.66□□□□□ -0.7
PRPF3-206ENST00000493553 FNDC3AQ9Y2H6 1198 aaKnown RBP10.66□□□□□ -0.7
PRPF3-206ENST00000493553 C2CD2Q9Y426 696 aa10.66□□□□□ -0.7
PRPF3-206ENST00000493553 ALG6Q9Y672 507 aa10.66□□□□□ -0.7
PRPF3-206ENST00000493553 LRRC37A2A6NM11 1700 aa10.66□□□□□ -0.7
PRPF3-206ENST00000493553 ZNF236Q9UL36 1845 aa10.65□□□□□ -0.7
PRPF3-206ENST00000493553 A0A0A0MRY4 1105 aa10.65□□□□□ -0.7
PRPF3-206ENST00000493553 SMIM35A0A1B0GVV1 85 aa10.65□□□□□ -0.7
PRPF3-206ENST00000493553 MYO1FO00160 1098 aa10.65□□□□□ -0.7
PRPF3-206ENST00000493553 ABLIM1O14639 778 aa10.65□□□□□ -0.7
PRPF3-206ENST00000493553 XPOTO43592 962 aaKnown RBP10.65□□□□□ -0.7
PRPF3-206ENST00000493553 SPOPO43791 374 aa10.65□□□□□ -0.7
PRPF3-206ENST00000493553 VNN1O95497 513 aa10.65□□□□□ -0.7
PRPF3-206ENST00000493553 CYP1A1P04798 512 aaPredicted RBP10.65□□□□□ -0.7
PRPF3-206ENST00000493553 MMEP08473 750 aa10.65□□□□□ -0.7
PRPF3-206ENST00000493553 HARSP12081 509 aaKnown RBP10.65□□□□□ -0.7
PRPF3-206ENST00000493553 ACO1P21399 889 aaKnown RBP10.65□□□□□ -0.7
PRPF3-206ENST00000493553 GNA15P30679 374 aa10.65□□□□□ -0.7
PRPF3-206ENST00000493553 CXCR5P32302 372 aa10.65□□□□□ -0.7
PRPF3-206ENST00000493553 CLCN3P51790 818 aa10.65□□□□□ -0.7
PRPF3-206ENST00000493553 ZNF132P52740 706 aa10.65□□□□□ -0.7
PRPF3-206ENST00000493553 RWDD2BP57060 319 aa10.65□□□□□ -0.7
PRPF3-206ENST00000493553 TFAMQ00059 246 aaKnown RBP10.65□□□□□ -0.7
PRPF3-206ENST00000493553 C2orf54Q08AI8 447 aa10.65□□□□□ -0.7
PRPF3-206ENST00000493553 PTP4A2Q12974 167 aa10.65□□□□□ -0.7
PRPF3-206ENST00000493553 DRP2Q13474 957 aa10.65□□□□□ -0.7
PRPF3-206ENST00000493553 DHX34Q14147 1143 aaKnown RBP10.65□□□□□ -0.7
PRPF3-206ENST00000493553 STILQ15468 1287 aa10.65□□□□□ -0.7
PRPF3-206ENST00000493553 ZNF667Q5HYK9 610 aa10.65□□□□□ -0.7
PRPF3-206ENST00000493553 TAF3Q5VWG9 929 aa10.65□□□□□ -0.7
PRPF3-206ENST00000493553 ALS2CLQ60I27 953 aa10.65□□□□□ -0.7
PRPF3-206ENST00000493553 RGMBQ6NW40 437 aa10.65□□□□□ -0.7
PRPF3-206ENST00000493553 TMEM270Q6UE05 265 aa10.65□□□□□ -0.7
PRPF3-206ENST00000493553 MCOLN2Q8IZK6 566 aa10.65□□□□□ -0.7
PRPF3-206ENST00000493553 TMEM35BQ8NCS4 154 aa10.65□□□□□ -0.7
PRPF3-206ENST00000493553 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.65□□□□□ -0.7
PRPF3-206ENST00000493553 KAT5Q92993 513 aa10.65□□□□□ -0.7
PRPF3-206ENST00000493553 APBA2Q99767 749 aa10.65□□□□□ -0.7
PRPF3-206ENST00000493553 ZSWIM1Q9BR11 485 aa10.65□□□□□ -0.7
PRPF3-206ENST00000493553 NUP85Q9BW27 656 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms