RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 ZSWIM1Q9BR11 485 aa16.96■□□□□ 0.31
BRAT1-206ENST00000493232 YIPF2Q9BWQ6 316 aa16.96■□□□□ 0.31
BRAT1-206ENST00000493232 KCNF1Q9H3M0 494 aa16.96■□□□□ 0.31
BRAT1-206ENST00000493232 DDIT4Q9NX09 232 aa16.96■□□□□ 0.31
BRAT1-206ENST00000493232 EVPLLA8MZ36 301 aa16.96■□□□□ 0.31
BRAT1-206ENST00000493232 SKOR1P84550 965 aa16.96■□□□□ 0.31
BRAT1-206ENST00000493232 PDK2Q15119 407 aa16.96■□□□□ 0.31
BRAT1-206ENST00000493232 CENPPQ6IPU0 288 aa16.96■□□□□ 0.31
BRAT1-206ENST00000493232 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.96■□□□□ 0.31
BRAT1-206ENST00000493232 SH2D3CQ8N5H7 860 aa16.96■□□□□ 0.31
BRAT1-206ENST00000493232 ZNF518BQ9C0D4 1074 aa16.96■□□□□ 0.31
BRAT1-206ENST00000493232 YIPF3Q9GZM5 350 aa16.96■□□□□ 0.31
BRAT1-206ENST00000493232 PRG3Q9Y2Y8 225 aaPredicted RBP16.96■□□□□ 0.31
BRAT1-206ENST00000493232 KRT87PA6NCN2 255 aa16.96■□□□□ 0.3
BRAT1-206ENST00000493232 MRNIPQ6NTE8 343 aa16.96■□□□□ 0.3
BRAT1-206ENST00000493232 GFM2Q969S9 779 aaKnown RBP16.96■□□□□ 0.3
BRAT1-206ENST00000493232 RUSC1Q9BVN2 902 aa16.96■□□□□ 0.3
BRAT1-206ENST00000493232 APOL5Q9BWW9 433 aa16.96■□□□□ 0.3
BRAT1-206ENST00000493232 SYNDIG1Q9H7V2 258 aa16.96■□□□□ 0.3
BRAT1-206ENST00000493232 HPS5Q9UPZ3 1129 aa16.96■□□□□ 0.3
BRAT1-206ENST00000493232 RASSF10A6NK89 507 aa16.95■□□□□ 0.3
BRAT1-206ENST00000493232 M0QYT0 321 aa16.95■□□□□ 0.3
BRAT1-206ENST00000493232 SUPT20HL2P0C7V6 817 aa16.95■□□□□ 0.3
BRAT1-206ENST00000493232 SLC26A2P50443 739 aa16.95■□□□□ 0.3
BRAT1-206ENST00000493232 POU4F1Q01851 419 aa16.95■□□□□ 0.3
BRAT1-206ENST00000493232 LVRNQ6Q4G3 990 aa16.95■□□□□ 0.3
BRAT1-206ENST00000493232 BBS7Q8IWZ6 715 aa16.95■□□□□ 0.3
BRAT1-206ENST00000493232 EME1Q96AY2 570 aa16.95■□□□□ 0.3
BRAT1-206ENST00000493232 SLC39A10Q9ULF5 831 aa16.95■□□□□ 0.3
BRAT1-206ENST00000493232 CTDNEP1O95476 244 aa16.95■□□□□ 0.3
BRAT1-206ENST00000493232 TJAP1Q5JTD0 557 aa16.95■□□□□ 0.3
BRAT1-206ENST00000493232 PLEKHH3Q7Z736 793 aa16.95■□□□□ 0.3
BRAT1-206ENST00000493232 OOSP2Q86WS3 158 aa16.95■□□□□ 0.3
BRAT1-206ENST00000493232 TPCN2Q8NHX9 752 aa16.95■□□□□ 0.3
BRAT1-206ENST00000493232 ADAM33Q9BZ11 813 aa16.95■□□□□ 0.3
BRAT1-206ENST00000493232 MANSC1Q9H8J5 431 aa16.95■□□□□ 0.3
BRAT1-206ENST00000493232 AAR2Q9Y312 384 aaKnown RBP16.95■□□□□ 0.3
BRAT1-206ENST00000493232 BCORL1Q5H9F3 1711 aa16.95■□□□□ 0.3
BRAT1-206ENST00000493232 C2orf81A6NN90 581 aa16.95■□□□□ 0.3
BRAT1-206ENST00000493232 SREBF1P36956 1147 aa16.95■□□□□ 0.3
BRAT1-206ENST00000493232 GRB10Q13322 594 aa16.95■□□□□ 0.3
BRAT1-206ENST00000493232 TIGD7Q6NT04 549 aaPredicted RBP16.95■□□□□ 0.3
BRAT1-206ENST00000493232 HS6ST3Q8IZP7 471 aa16.95■□□□□ 0.3
BRAT1-206ENST00000493232 B4GALNT2Q8NHY0 566 aa16.95■□□□□ 0.3
BRAT1-206ENST00000493232 SERPINB12Q96P63 405 aa16.95■□□□□ 0.3
BRAT1-206ENST00000493232 AP1G2O75843 785 aa16.95■□□□□ 0.3
BRAT1-206ENST00000493232 THPOP40225 353 aa16.95■□□□□ 0.3
BRAT1-206ENST00000493232 RAP1GDS1P52306 607 aa16.95■□□□□ 0.3
BRAT1-206ENST00000493232 POLD3Q15054 466 aaPredicted RBP16.95■□□□□ 0.3
BRAT1-206ENST00000493232 CYTH1Q15438 398 aa16.95■□□□□ 0.3
BRAT1-206ENST00000493232 ERP27Q96DN0 273 aa16.95■□□□□ 0.3
BRAT1-206ENST00000493232 TRMT6Q9UJA5 497 aaKnown RBP16.95■□□□□ 0.3
BRAT1-206ENST00000493232 DSEQ9UL01 958 aa16.95■□□□□ 0.3
BRAT1-206ENST00000493232 SLC37A4O43826 429 aa16.94■□□□□ 0.3
BRAT1-206ENST00000493232 EIF2B5Q13144 721 aaKnown RBP16.94■□□□□ 0.3
BRAT1-206ENST00000493232 KBTBD12Q3ZCT8 623 aa16.94■□□□□ 0.3
BRAT1-206ENST00000493232 ERO1BQ86YB8 467 aa16.94■□□□□ 0.3
BRAT1-206ENST00000493232 ZDHHC15Q96MV8 337 aa16.94■□□□□ 0.3
BRAT1-206ENST00000493232 EHD4Q9H223 541 aa16.94■□□□□ 0.3
BRAT1-206ENST00000493232 NMRK1Q9NWW6 199 aa16.94■□□□□ 0.3
BRAT1-206ENST00000493232 MYO1GB0I1T2 1018 aa16.94■□□□□ 0.3
BRAT1-206ENST00000493232 F5H5T6 163 aa16.94■□□□□ 0.3
BRAT1-206ENST00000493232 H2AFYO75367 372 aaKnown RBP16.94■□□□□ 0.3
BRAT1-206ENST00000493232 DEAF1O75398 565 aaPredicted RBP16.94■□□□□ 0.3
BRAT1-206ENST00000493232 H2AFY2Q9P0M6 372 aaPredicted RBP16.94■□□□□ 0.3
BRAT1-206ENST00000493232 LMTK2Q8IWU2 1503 aa16.94■□□□□ 0.3
BRAT1-206ENST00000493232 VWA5AO00534 786 aa16.94■□□□□ 0.3
BRAT1-206ENST00000493232 SEC24DO94855 1032 aaPredicted RBP16.94■□□□□ 0.3
BRAT1-206ENST00000493232 FBXO21O94952 628 aa16.94■□□□□ 0.3
BRAT1-206ENST00000493232 KLK7P49862 253 aa16.94■□□□□ 0.3
BRAT1-206ENST00000493232 UCMAQ8WVF2 138 aa16.94■□□□□ 0.3
BRAT1-206ENST00000493232 CYFIP2Q96F07 1278 aa16.94■□□□□ 0.3
BRAT1-206ENST00000493232 CGRRF1Q99675 332 aa16.94■□□□□ 0.3
BRAT1-206ENST00000493232 C17orf80Q9BSJ5 609 aa16.94■□□□□ 0.3
BRAT1-206ENST00000493232 RIMBP3CA6NJZ7 1639 aa16.94■□□□□ 0.3
BRAT1-206ENST00000493232 RIMBP3BA6NNM3 1639 aa16.94■□□□□ 0.3
BRAT1-206ENST00000493232 AIM2O14862 343 aa16.94■□□□□ 0.3
BRAT1-206ENST00000493232 TP53BP2Q13625 1128 aa16.94■□□□□ 0.3
BRAT1-206ENST00000493232 EPC2Q52LR7 807 aa16.94■□□□□ 0.3
BRAT1-206ENST00000493232 AGAP9Q5VTM2 703 aa16.94■□□□□ 0.3
BRAT1-206ENST00000493232 TRIM65Q6PJ69 517 aa16.94■□□□□ 0.3
BRAT1-206ENST00000493232 TMC2Q8TDI7 906 aa16.94■□□□□ 0.3
BRAT1-206ENST00000493232 GMCL1Q96IK5 515 aa16.94■□□□□ 0.3
BRAT1-206ENST00000493232 FAR2Q96K12 515 aa16.94■□□□□ 0.3
BRAT1-206ENST00000493232 RPRD1AQ96P16 312 aaPredicted RBP16.94■□□□□ 0.3
BRAT1-206ENST00000493232 ADGRA2Q96PE1 1338 aa16.94■□□□□ 0.3
BRAT1-206ENST00000493232 FAM118BQ9BPY3 351 aa16.94■□□□□ 0.3
BRAT1-206ENST00000493232 RIMBP3Q9UFD9 1639 aa16.94■□□□□ 0.3
BRAT1-206ENST00000493232 SLC15A2Q16348 729 aa16.93■□□□□ 0.3
BRAT1-206ENST00000493232 IFNEQ86WN2 208 aa16.93■□□□□ 0.3
BRAT1-206ENST00000493232 GMCL1P1Q8NEA9 526 aa16.93■□□□□ 0.3
BRAT1-206ENST00000493232 PLAGL2Q9UPG8 496 aa16.93■□□□□ 0.3
BRAT1-206ENST00000493232 PHF20L1A8MW92 1017 aa16.93■□□□□ 0.3
BRAT1-206ENST00000493232 CARSP49589 748 aaKnown RBP16.93■□□□□ 0.3
BRAT1-206ENST00000493232 CCDC85BQ15834 202 aaPredicted RBP16.93■□□□□ 0.3
BRAT1-206ENST00000493232 TRPM8Q7Z2W7 1104 aa16.93■□□□□ 0.3
BRAT1-206ENST00000493232 CCDC126Q96EE4 140 aa16.93■□□□□ 0.3
BRAT1-206ENST00000493232 BRD8Q9H0E9 1235 aa16.93■□□□□ 0.3
BRAT1-206ENST00000493232 MYO3AQ8NEV4 1616 aa16.93■□□□□ 0.3
BRAT1-206ENST00000493232 CTCFP49711 727 aaPredicted RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms