RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 RHOBTB3O94955 611 aa12.3□□□□□ -0.44
LRTM1-202ENST00000493075 RPN1P04843 607 aaKnown RBP12.3□□□□□ -0.44
LRTM1-202ENST00000493075 SP9P0CG40 484 aa12.3□□□□□ -0.44
LRTM1-202ENST00000493075 LMO2P25791 158 aa12.3□□□□□ -0.44
LRTM1-202ENST00000493075 GNL1P36915 607 aaPredicted RBP12.3□□□□□ -0.44
LRTM1-202ENST00000493075 TRPC3Q13507 836 aa12.3□□□□□ -0.44
LRTM1-202ENST00000493075 DDR2Q16832 855 aa12.3□□□□□ -0.44
LRTM1-202ENST00000493075 ZNF528Q3MIS6 628 aa12.3□□□□□ -0.44
LRTM1-202ENST00000493075 WDR72Q3MJ13 1102 aa12.3□□□□□ -0.44
LRTM1-202ENST00000493075 VSTM1Q6UX27 236 aa12.3□□□□□ -0.44
LRTM1-202ENST00000493075 FRMD5Q7Z6J6 570 aa12.3□□□□□ -0.44
LRTM1-202ENST00000493075 TMEM150AQ86TG1 271 aa12.3□□□□□ -0.44
LRTM1-202ENST00000493075 MON1AQ86VX9 555 aa12.3□□□□□ -0.44
LRTM1-202ENST00000493075 CMTM8Q8IZV2 173 aa12.3□□□□□ -0.44
LRTM1-202ENST00000493075 CELF5Q8N6W0 485 aaKnown RBP12.3□□□□□ -0.44
LRTM1-202ENST00000493075 MYCBPAPQ8TBZ2 947 aa12.3□□□□□ -0.44
LRTM1-202ENST00000493075 CSGALNACT1Q8TDX6 532 aa12.3□□□□□ -0.44
LRTM1-202ENST00000493075 FAM3CQ92520 227 aa12.3□□□□□ -0.44
LRTM1-202ENST00000493075 NKD2Q969F2 451 aaPredicted RBP12.3□□□□□ -0.44
LRTM1-202ENST00000493075 SYAP1Q96A49 352 aaPredicted RBP12.3□□□□□ -0.44
LRTM1-202ENST00000493075 CHAMP1Q96JM3 812 aa12.3□□□□□ -0.44
LRTM1-202ENST00000493075 SPATA17Q96L03 361 aa12.3□□□□□ -0.44
LRTM1-202ENST00000493075 LRRC3BQ96PB8 259 aa12.3□□□□□ -0.44
LRTM1-202ENST00000493075 MMS19Q96T76 1030 aa12.3□□□□□ -0.44
LRTM1-202ENST00000493075 SYT15Q9BQS2 421 aa12.3□□□□□ -0.44
LRTM1-202ENST00000493075 IER2Q9BTL4 223 aa12.3□□□□□ -0.44
LRTM1-202ENST00000493075 THG1LQ9NWX6 298 aaKnown RBP12.3□□□□□ -0.44
LRTM1-202ENST00000493075 TRAF3IP3Q9Y228 551 aa12.3□□□□□ -0.44
LRTM1-202ENST00000493075 NCANO14594 1321 aa12.3□□□□□ -0.44
LRTM1-202ENST00000493075 PRR23AA6NEV1 266 aa12.29□□□□□ -0.44
LRTM1-202ENST00000493075 SLC38A8A6NNN8 435 aa12.29□□□□□ -0.44
LRTM1-202ENST00000493075 MAPK13O15264 365 aa12.29□□□□□ -0.44
LRTM1-202ENST00000493075 LAMTOR5O43504 91 aa12.29□□□□□ -0.44
LRTM1-202ENST00000493075 ATP2C2O75185 946 aa12.29□□□□□ -0.44
LRTM1-202ENST00000493075 C4BPAP04003 597 aaKnown RBP12.29□□□□□ -0.44
LRTM1-202ENST00000493075 GPR15P49685 360 aa12.29□□□□□ -0.44
LRTM1-202ENST00000493075 CDR1P51861 262 aa12.29□□□□□ -0.44
LRTM1-202ENST00000493075 CYP4F8P98187 520 aa12.29□□□□□ -0.44
LRTM1-202ENST00000493075 DPYDQ12882 1025 aa12.29□□□□□ -0.44
LRTM1-202ENST00000493075 BECN1Q14457 450 aa12.29□□□□□ -0.44
LRTM1-202ENST00000493075 NFIL3Q16649 462 aa12.29□□□□□ -0.44
LRTM1-202ENST00000493075 ZC3H14Q6PJT7 736 aaKnown RBP12.29□□□□□ -0.44
LRTM1-202ENST00000493075 KRBA2Q6ZNG9 492 aa12.29□□□□□ -0.44
LRTM1-202ENST00000493075 ASCL5Q7RTU5 278 aa12.29□□□□□ -0.44
LRTM1-202ENST00000493075 MAML2Q8IZL2 1156 aaPredicted RBP12.29□□□□□ -0.44
LRTM1-202ENST00000493075 FSIP1Q8NA03 581 aa12.29□□□□□ -0.44
LRTM1-202ENST00000493075 PLEKHO2Q8TD55 490 aa12.29□□□□□ -0.44
LRTM1-202ENST00000493075 TMC2Q8TDI7 906 aa12.29□□□□□ -0.44
LRTM1-202ENST00000493075 BPIFB1Q8TDL5 484 aa12.29□□□□□ -0.44
LRTM1-202ENST00000493075 MRPS31Q92665 395 aaKnown RBP12.29□□□□□ -0.44
LRTM1-202ENST00000493075 MRPL45Q9BRJ2 306 aaKnown RBP12.29□□□□□ -0.44
LRTM1-202ENST00000493075 XYLT2Q9H1B5 865 aa12.29□□□□□ -0.44
LRTM1-202ENST00000493075 SNX25Q9H3E2 840 aa12.29□□□□□ -0.44
LRTM1-202ENST00000493075 CRTAC1Q9NQ79 661 aa12.29□□□□□ -0.44
LRTM1-202ENST00000493075 SPATA6Q9NWH7 488 aaPredicted RBP12.29□□□□□ -0.44
LRTM1-202ENST00000493075 PIAS3Q9Y6X2 628 aa12.29□□□□□ -0.44
LRTM1-202ENST00000493075 SCN1AP35498 2009 aa12.28□□□□□ -0.44
LRTM1-202ENST00000493075 IKBKBO14920 756 aa12.28□□□□□ -0.44
LRTM1-202ENST00000493075 HCRTO43612 131 aa12.28□□□□□ -0.44
LRTM1-202ENST00000493075 CALUO43852 315 aaPredicted RBP12.28□□□□□ -0.44
LRTM1-202ENST00000493075 PHACTR2O75167 634 aa12.28□□□□□ -0.44
LRTM1-202ENST00000493075 ZNF202O95125 648 aa12.28□□□□□ -0.44
LRTM1-202ENST00000493075 NR3C1P04150 777 aa12.28□□□□□ -0.44
LRTM1-202ENST00000493075 PDGFRBP09619 1106 aa12.28□□□□□ -0.44
LRTM1-202ENST00000493075 AVPR1AP37288 418 aa12.28□□□□□ -0.44
LRTM1-202ENST00000493075 MYL6P60660 151 aa12.28□□□□□ -0.44
LRTM1-202ENST00000493075 TNNC1P63316 161 aa12.28□□□□□ -0.44
LRTM1-202ENST00000493075 ENPEPQ07075 957 aa12.28□□□□□ -0.44
LRTM1-202ENST00000493075 ZNF268Q14587 947 aaPredicted RBP12.28□□□□□ -0.44
LRTM1-202ENST00000493075 KCNB1Q14721 858 aa12.28□□□□□ -0.44
LRTM1-202ENST00000493075 RALGPS2Q86X27 583 aaPredicted RBP12.28□□□□□ -0.44
LRTM1-202ENST00000493075 GPIHBP1Q8IV16 184 aa12.28□□□□□ -0.44
LRTM1-202ENST00000493075 SCN4BQ8IWT1 228 aa12.28□□□□□ -0.44
LRTM1-202ENST00000493075 MAB21L3Q8N8X9 362 aa12.28□□□□□ -0.44
LRTM1-202ENST00000493075 CCDC34Q96HJ3 373 aa12.28□□□□□ -0.44
LRTM1-202ENST00000493075 KIF9Q9HAQ2 790 aa12.28□□□□□ -0.44
LRTM1-202ENST00000493075 TDP1Q9NUW8 608 aa12.28□□□□□ -0.44
LRTM1-202ENST00000493075 EHD2Q9NZN4 543 aa12.28□□□□□ -0.44
LRTM1-202ENST00000493075 MAGED2Q9UNF1 606 aaPredicted RBP12.28□□□□□ -0.44
LRTM1-202ENST00000493075 ANK1P16157 1881 aa12.28□□□□□ -0.44
LRTM1-202ENST00000493075 CACNA1HO95180 2353 aa12.27□□□□□ -0.44
LRTM1-202ENST00000493075 LRRIQ3A6PVS8 624 aaPredicted RBP12.27□□□□□ -0.45
LRTM1-202ENST00000493075 PRAMEF12O95522 483 aa12.27□□□□□ -0.45
LRTM1-202ENST00000493075 CHRNB1P11230 501 aa12.27□□□□□ -0.45
LRTM1-202ENST00000493075 PFKLP17858 780 aa12.27□□□□□ -0.45
LRTM1-202ENST00000493075 PTPN1P18031 435 aaKnown RBP12.27□□□□□ -0.45
LRTM1-202ENST00000493075 CASP4P49662 377 aa12.27□□□□□ -0.45
LRTM1-202ENST00000493075 KPNA1P52294 538 aaPredicted RBP12.27□□□□□ -0.45
LRTM1-202ENST00000493075 MCCD1P59942 119 aaPredicted RBP12.27□□□□□ -0.45
LRTM1-202ENST00000493075 PSMC1P62191 440 aaKnown RBP12.27□□□□□ -0.45
LRTM1-202ENST00000493075 NUCB2P80303 420 aa12.27□□□□□ -0.45
LRTM1-202ENST00000493075 SGSM1Q2NKQ1 1148 aa12.27□□□□□ -0.45
LRTM1-202ENST00000493075 SDHAF4Q5VUM1 108 aa12.27□□□□□ -0.45
LRTM1-202ENST00000493075 TDRD10Q5VZ19 366 aaKnown RBP12.27□□□□□ -0.45
LRTM1-202ENST00000493075 TXNDC8Q6A555 127 aa12.27□□□□□ -0.45
LRTM1-202ENST00000493075 GUF1Q8N442 669 aaKnown RBP12.27□□□□□ -0.45
LRTM1-202ENST00000493075 OR6B3Q8NGW1 331 aa12.27□□□□□ -0.45
LRTM1-202ENST00000493075 TAF4BQ92750 862 aa12.27□□□□□ -0.45
LRTM1-202ENST00000493075 USP13Q92995 863 aaPredicted RBP12.27□□□□□ -0.45
LRTM1-202ENST00000493075 MYLPFQ96A32 169 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms