RNA–Protein interactions for RNA: ENST00000493026.2

PSMD11-205, Transcript of proteasome 26S subunit, non-ATPase 11, human

TSL 2

Gene PSMD11, Length 2,387 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD11-205	ENST00000493026	TMEM63B	Q5T3F8	832 aa		13.42	□□□□□ -0.26
PSMD11-205	ENST00000493026	TMEM270	Q6UE05	265 aa		13.42	□□□□□ -0.26
PSMD11-205	ENST00000493026	ASRGL1	Q7L266	308 aa		13.42	□□□□□ -0.26
PSMD11-205	ENST00000493026	GSTA5	Q7RTV2	222 aa		13.42	□□□□□ -0.26
PSMD11-205	ENST00000493026	TRMT1L	Q7Z2T5	733 aa	Known RBP	13.42	□□□□□ -0.26
PSMD11-205	ENST00000493026	PHTF2	Q8N3S3	785 aa		13.42	□□□□□ -0.26
PSMD11-205	ENST00000493026	ALLC	Q8N6M5	410 aa		13.42	□□□□□ -0.26
PSMD11-205	ENST00000493026	ANKRD42	Q8N9B4	389 aa		13.42	□□□□□ -0.26
PSMD11-205	ENST00000493026	RBBP8NL	Q8NC74	664 aa	Predicted RBP	13.42	□□□□□ -0.26
PSMD11-205	ENST00000493026	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	13.42	□□□□□ -0.26
PSMD11-205	ENST00000493026	TMEM134	Q9H6X4	195 aa		13.42	□□□□□ -0.26
PSMD11-205	ENST00000493026	SHOC2	Q9UQ13	582 aa		13.42	□□□□□ -0.26
PSMD11-205	ENST00000493026	STARD13	Q9Y3M8	1113 aa		13.42	□□□□□ -0.26
PSMD11-205	ENST00000493026	PRSS47	A8MTI9	375 aa		13.42	□□□□□ -0.26
PSMD11-205	ENST00000493026	ZBTB24	O43167	697 aa	Predicted RBP	13.42	□□□□□ -0.26
PSMD11-205	ENST00000493026	RGS20	O76081	388 aa		13.42	□□□□□ -0.26
PSMD11-205	ENST00000493026	SUPT20HL2	P0C7V6	817 aa		13.42	□□□□□ -0.26
PSMD11-205	ENST00000493026	TAC1	P20366	129 aa		13.42	□□□□□ -0.26
PSMD11-205	ENST00000493026	NLRP11	P59045	1033 aa	Known RBP	13.42	□□□□□ -0.26
PSMD11-205	ENST00000493026	SUPT20HL1	Q3ZLR7	823 aa		13.42	□□□□□ -0.26
PSMD11-205	ENST00000493026	ZC3H12A	Q5D1E8	599 aa	Known RBP	13.42	□□□□□ -0.26
PSMD11-205	ENST00000493026	SPDYA	Q5MJ70	313 aa		13.42	□□□□□ -0.26
PSMD11-205	ENST00000493026	TBC1D1	Q86TI0	1168 aa	Predicted RBP	13.42	□□□□□ -0.26
PSMD11-205	ENST00000493026	TRABD2A	Q86V40	505 aa		13.42	□□□□□ -0.26
PSMD11-205	ENST00000493026	CCDC60	Q8IWA6	550 aa	Predicted RBP	13.42	□□□□□ -0.26
PSMD11-205	ENST00000493026	SRRM1	Q8IYB3	904 aa	Known RBP	13.42	□□□□□ -0.26
PSMD11-205	ENST00000493026	NIPA2	Q8N8Q9	360 aa		13.42	□□□□□ -0.26
PSMD11-205	ENST00000493026	REPS2	Q8NFH8	660 aa		13.42	□□□□□ -0.26
PSMD11-205	ENST00000493026	TCP11	Q8WWU5	503 aa		13.42	□□□□□ -0.26
PSMD11-205	ENST00000493026	SLITRK1	Q96PX8	696 aa		13.42	□□□□□ -0.26
PSMD11-205	ENST00000493026	DHX33	Q9H6R0	707 aa	Known RBP	13.42	□□□□□ -0.26
PSMD11-205	ENST00000493026	EBF2	Q9HAK2	575 aa		13.42	□□□□□ -0.26
PSMD11-205	ENST00000493026	APOBEC3G	Q9HC16	384 aa	Known RBP	13.42	□□□□□ -0.26
PSMD11-205	ENST00000493026	SSU72	Q9NP77	194 aa	Known RBP	13.42	□□□□□ -0.26
PSMD11-205	ENST00000493026	MYOZ2	Q9NPC6	264 aa		13.42	□□□□□ -0.26
PSMD11-205	ENST00000493026	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.42	□□□□□ -0.26
PSMD11-205	ENST00000493026	SLC24A2	Q9UI40	661 aa		13.42	□□□□□ -0.26
PSMD11-205	ENST00000493026		K7ERI5	159 aa		13.41	□□□□□ -0.26
PSMD11-205	ENST00000493026	ALOX15B	O15296	676 aa		13.41	□□□□□ -0.26
PSMD11-205	ENST00000493026	FZD6	O60353	706 aa		13.41	□□□□□ -0.26
PSMD11-205	ENST00000493026	ASMTL	O95671	621 aa		13.41	□□□□□ -0.26
PSMD11-205	ENST00000493026	ITGAV	P06756	1048 aa		13.41	□□□□□ -0.26
PSMD11-205	ENST00000493026	ARL2	P36404	184 aa		13.41	□□□□□ -0.26
PSMD11-205	ENST00000493026	POLG	P54098	1239 aa	Predicted RBP	13.41	□□□□□ -0.26
PSMD11-205	ENST00000493026	NOP14	P78316	857 aa	Known RBP	13.41	□□□□□ -0.26
PSMD11-205	ENST00000493026	PIGH	Q14442	188 aa	Predicted RBP	13.41	□□□□□ -0.26
PSMD11-205	ENST00000493026	INO80D	Q53TQ3	878 aa	Predicted RBP	13.41	□□□□□ -0.26
PSMD11-205	ENST00000493026	C6orf132	Q5T0Z8	1188 aa		13.41	□□□□□ -0.26
PSMD11-205	ENST00000493026	PNMA8A	Q86V59	439 aa	Predicted RBP	13.41	□□□□□ -0.26
PSMD11-205	ENST00000493026	ATCAY	Q86WG3	371 aa		13.41	□□□□□ -0.26
PSMD11-205	ENST00000493026	SIX5	Q8N196	739 aa		13.41	□□□□□ -0.26
PSMD11-205	ENST00000493026	CELF2-AS1	Q8N7Q2	184 aa		13.41	□□□□□ -0.26
PSMD11-205	ENST00000493026	DENND1A	Q8TEH3	1009 aa		13.41	□□□□□ -0.26
PSMD11-205	ENST00000493026	KLHL29	Q96CT2	875 aa		13.41	□□□□□ -0.26
PSMD11-205	ENST00000493026	PITPNM3	Q9BZ71	974 aa		13.41	□□□□□ -0.26
PSMD11-205	ENST00000493026	IMPG2	Q9BZV3	1241 aa		13.41	□□□□□ -0.26
PSMD11-205	ENST00000493026	BAIAP2L1	Q9UHR4	511 aa		13.41	□□□□□ -0.26
PSMD11-205	ENST00000493026	MRPS23	Q9Y3D9	190 aa	Known RBP	13.41	□□□□□ -0.26
PSMD11-205	ENST00000493026	ZNFX1	Q9P2E3	1918 aa	Known RBP	13.41	□□□□□ -0.26
PSMD11-205	ENST00000493026	ADGRA2	Q96PE1	1338 aa		13.41	□□□□□ -0.26
PSMD11-205	ENST00000493026	EXOC1L	A0A1B0GW35	172 aa		13.4	□□□□□ -0.26
PSMD11-205	ENST00000493026	KLF4	O43474	513 aa		13.4	□□□□□ -0.26
PSMD11-205	ENST00000493026	GH1	P01241	217 aa		13.4	□□□□□ -0.26
PSMD11-205	ENST00000493026	CALCA	P01258	141 aa		13.4	□□□□□ -0.26
PSMD11-205	ENST00000493026	CETP	P11597	493 aa		13.4	□□□□□ -0.26
PSMD11-205	ENST00000493026	VPS41	P49754	854 aa		13.4	□□□□□ -0.26
PSMD11-205	ENST00000493026	KCTD2	Q14681	263 aa		13.4	□□□□□ -0.26
PSMD11-205	ENST00000493026	POLN	Q7Z5Q5	900 aa		13.4	□□□□□ -0.26
PSMD11-205	ENST00000493026	FITM2	Q8N6M3	262 aa		13.4	□□□□□ -0.26
PSMD11-205	ENST00000493026	DEPTOR	Q8TB45	409 aa		13.4	□□□□□ -0.26
PSMD11-205	ENST00000493026	ZNF606	Q8WXB4	792 aa		13.4	□□□□□ -0.26
PSMD11-205	ENST00000493026	ATG4C	Q96DT6	458 aa		13.4	□□□□□ -0.26
PSMD11-205	ENST00000493026	C9orf72	Q96LT7	481 aa		13.4	□□□□□ -0.26
PSMD11-205	ENST00000493026	NIFK	Q9BYG3	293 aa	Known RBP	13.4	□□□□□ -0.26
PSMD11-205	ENST00000493026	CXorf56	Q9H5V9	222 aa		13.4	□□□□□ -0.26
PSMD11-205	ENST00000493026	NOD1	Q9Y239	953 aa		13.4	□□□□□ -0.26
PSMD11-205	ENST00000493026	RIPK3	Q9Y572	518 aa		13.4	□□□□□ -0.26
PSMD11-205	ENST00000493026	COL4A5	P29400	1685 aa		13.4	□□□□□ -0.26
PSMD11-205	ENST00000493026	PTPRJ	Q12913	1337 aa		13.4	□□□□□ -0.26
PSMD11-205	ENST00000493026	CNTNAP2	Q9UHC6	1331 aa		13.4	□□□□□ -0.26
PSMD11-205	ENST00000493026	TCRBV5S1A1T	A0A578	114 aa		13.4	□□□□□ -0.26
PSMD11-205	ENST00000493026	CCND1	P24385	295 aa		13.4	□□□□□ -0.26
PSMD11-205	ENST00000493026	ICAM3	P32942	547 aa		13.4	□□□□□ -0.26
PSMD11-205	ENST00000493026	ACOT2	P49753	483 aa		13.4	□□□□□ -0.26
PSMD11-205	ENST00000493026	VCP	P55072	806 aa	Known RBP	13.4	□□□□□ -0.26
PSMD11-205	ENST00000493026	BACE1	P56817	501 aa		13.4	□□□□□ -0.26
PSMD11-205	ENST00000493026	ZNF280A	P59817	542 aa	Predicted RBP	13.4	□□□□□ -0.26
PSMD11-205	ENST00000493026	CXCL9	Q07325	125 aa		13.4	□□□□□ -0.26
PSMD11-205	ENST00000493026	SPARCL1	Q14515	664 aa		13.4	□□□□□ -0.26
PSMD11-205	ENST00000493026	EML3	Q32P44	896 aa		13.4	□□□□□ -0.26
PSMD11-205	ENST00000493026	ZPBP2	Q6X784	338 aa		13.4	□□□□□ -0.26
PSMD11-205	ENST00000493026	PDCD7	Q8N8D1	485 aa	Known RBP	13.4	□□□□□ -0.26
PSMD11-205	ENST00000493026	FBF1	Q8TES7	1133 aa		13.4	□□□□□ -0.26
PSMD11-205	ENST00000493026	C12orf42	Q96LP6	360 aa		13.4	□□□□□ -0.26
PSMD11-205	ENST00000493026	MSTO1	Q9BUK6	570 aa		13.4	□□□□□ -0.26
PSMD11-205	ENST00000493026	PCDH9	Q9HC56	1237 aa		13.4	□□□□□ -0.26
PSMD11-205	ENST00000493026	ZIM2	Q9NZV7	527 aa		13.4	□□□□□ -0.26
PSMD11-205	ENST00000493026	ZNF148	Q9UQR1	794 aa		13.4	□□□□□ -0.26
PSMD11-205	ENST00000493026	SMAP	O00193	183 aa		13.39	□□□□□ -0.27
PSMD11-205	ENST00000493026	ASS1	P00966	412 aa	Known RBP	13.39	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms