RNA–Protein interactions for RNA: ENST00000492545.1

CTDSP1-211, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-211ENST00000492545 MAPK13O15264 365 aa25.31■■□□□ 1.64
CTDSP1-211ENST00000492545 LMO2P25791 158 aa25.31■■□□□ 1.64
CTDSP1-211ENST00000492545 CDR1P51861 262 aa25.31■■□□□ 1.64
CTDSP1-211ENST00000492545 NLRP12P59046 1061 aa25.31■■□□□ 1.64
CTDSP1-211ENST00000492545 UBXN2BQ14CS0 331 aa25.31■■□□□ 1.64
CTDSP1-211ENST00000492545 STXBP5Q5T5C0 1151 aa25.31■■□□□ 1.64
CTDSP1-211ENST00000492545 TMC2Q8TDI7 906 aa25.31■■□□□ 1.64
CTDSP1-211ENST00000492545 PHOX2BQ99453 314 aa25.31■■□□□ 1.64
CTDSP1-211ENST00000492545 GOLPH3LQ9H4A5 285 aa25.31■■□□□ 1.64
CTDSP1-211ENST00000492545 FAM86C1Q9NVL1 165 aa25.31■■□□□ 1.64
CTDSP1-211ENST00000492545 NOL4O94818 638 aa25.3■■□□□ 1.64
CTDSP1-211ENST00000492545 F11P03951 625 aa25.3■■□□□ 1.64
CTDSP1-211ENST00000492545 MYL6P60660 151 aa25.3■■□□□ 1.64
CTDSP1-211ENST00000492545 BIRC3Q13489 604 aa25.3■■□□□ 1.64
CTDSP1-211ENST00000492545 DDR2Q16832 855 aa25.3■■□□□ 1.64
CTDSP1-211ENST00000492545 ARHGAP29Q52LW3 1261 aa25.3■■□□□ 1.64
CTDSP1-211ENST00000492545 C1orf210Q8IVY1 113 aa25.3■■□□□ 1.64
CTDSP1-211ENST00000492545 GUF1Q8N442 669 aaKnown RBP25.3■■□□□ 1.64
CTDSP1-211ENST00000492545 MYCBPAPQ8TBZ2 947 aa25.3■■□□□ 1.64
CTDSP1-211ENST00000492545 MRPS31Q92665 395 aaKnown RBP25.3■■□□□ 1.64
CTDSP1-211ENST00000492545 CLDN23Q96B33 292 aa25.3■■□□□ 1.64
CTDSP1-211ENST00000492545 SLC46A2Q9BY10 475 aa25.3■■□□□ 1.64
CTDSP1-211ENST00000492545 XYLT2Q9H1B5 865 aa25.3■■□□□ 1.64
CTDSP1-211ENST00000492545 GDPD2Q9HCC8 539 aa25.3■■□□□ 1.64
CTDSP1-211ENST00000492545 ZFHX2Q9C0A1 2572 aaPredicted RBP25.29■■□□□ 1.64
CTDSP1-211ENST00000492545 ARNTLO00327 626 aa25.29■■□□□ 1.64
CTDSP1-211ENST00000492545 PRR29P0C7W0 189 aa25.29■■□□□ 1.64
CTDSP1-211ENST00000492545 RPL13P26373 211 aaKnown RBP25.29■■□□□ 1.64
CTDSP1-211ENST00000492545 RPS9P46781 194 aaKnown RBP25.29■■□□□ 1.64
CTDSP1-211ENST00000492545 CASP4P49662 377 aa25.29■■□□□ 1.64
CTDSP1-211ENST00000492545 PLCB2Q00722 1185 aa25.29■■□□□ 1.64
CTDSP1-211ENST00000492545 ENPEPQ07075 957 aa25.29■■□□□ 1.64
CTDSP1-211ENST00000492545 CMTM8Q8IZV2 173 aa25.29■■□□□ 1.64
CTDSP1-211ENST00000492545 CELF5Q8N6W0 485 aaKnown RBP25.29■■□□□ 1.64
CTDSP1-211ENST00000492545 OR6B3Q8NGW1 331 aa25.29■■□□□ 1.64
CTDSP1-211ENST00000492545 CSGALNACT1Q8TDX6 532 aa25.29■■□□□ 1.64
CTDSP1-211ENST00000492545 SPATA17Q96L03 361 aa25.29■■□□□ 1.64
CTDSP1-211ENST00000492545 THG1LQ9NWX6 298 aaKnown RBP25.29■■□□□ 1.64
CTDSP1-211ENST00000492545 EHD2Q9NZN4 543 aa25.29■■□□□ 1.64
CTDSP1-211ENST00000492545 SLC38A8A6NNN8 435 aa25.28■■□□□ 1.64
CTDSP1-211ENST00000492545 LRRIQ3A6PVS8 624 aaPredicted RBP25.28■■□□□ 1.64
CTDSP1-211ENST00000492545 ATP2C2O75185 946 aa25.28■■□□□ 1.64
CTDSP1-211ENST00000492545 C4BPAP04003 597 aaKnown RBP25.28■■□□□ 1.64
CTDSP1-211ENST00000492545 PDGFRBP09619 1106 aa25.28■■□□□ 1.64
CTDSP1-211ENST00000492545 AVPR1AP37288 418 aa25.28■■□□□ 1.64
CTDSP1-211ENST00000492545 CYP4F8P98187 520 aa25.28■■□□□ 1.64
CTDSP1-211ENST00000492545 NCOA4Q13772 614 aa25.28■■□□□ 1.64
CTDSP1-211ENST00000492545 TDRD10Q5VZ19 366 aaKnown RBP25.28■■□□□ 1.64
CTDSP1-211ENST00000492545 TMEM150AQ86TG1 271 aa25.28■■□□□ 1.64
CTDSP1-211ENST00000492545 PLEKHO2Q8TD55 490 aa25.28■■□□□ 1.64
CTDSP1-211ENST00000492545 BPIFB1Q8TDL5 484 aa25.28■■□□□ 1.64
CTDSP1-211ENST00000492545 RSPRY1Q96DX4 576 aa25.28■■□□□ 1.64
CTDSP1-211ENST00000492545 MRPL45Q9BRJ2 306 aaKnown RBP25.28■■□□□ 1.64
CTDSP1-211ENST00000492545 C8orf33Q9H7E9 229 aaPredicted RBP25.28■■□□□ 1.64
CTDSP1-211ENST00000492545 CRTAC1Q9NQ79 661 aa25.28■■□□□ 1.64
CTDSP1-211ENST00000492545 NXF1Q9UBU9 619 aaKnown RBP25.28■■□□□ 1.64
CTDSP1-211ENST00000492545 MAGED2Q9UNF1 606 aaPredicted RBP25.28■■□□□ 1.64
CTDSP1-211ENST00000492545 MTF2Q9Y483 593 aaPredicted RBP25.28■■□□□ 1.64
CTDSP1-211ENST00000492545 HCRTO43612 131 aa25.27■■□□□ 1.64
CTDSP1-211ENST00000492545 P4HA1P13674 534 aa25.27■■□□□ 1.64
CTDSP1-211ENST00000492545 CD72P21854 359 aa25.27■■□□□ 1.64
CTDSP1-211ENST00000492545 GPR15P49685 360 aa25.27■■□□□ 1.64
CTDSP1-211ENST00000492545 PSMC1P62191 440 aaKnown RBP25.27■■□□□ 1.64
CTDSP1-211ENST00000492545 SGSM1Q2NKQ1 1148 aa25.27■■□□□ 1.64
CTDSP1-211ENST00000492545 CEP135Q66GS9 1140 aa25.27■■□□□ 1.64
CTDSP1-211ENST00000492545 MON1AQ86VX9 555 aa25.27■■□□□ 1.64
CTDSP1-211ENST00000492545 SCN4BQ8IWT1 228 aa25.27■■□□□ 1.64
CTDSP1-211ENST00000492545 FMR1NBQ8N0W7 255 aaPredicted RBP25.27■■□□□ 1.64
CTDSP1-211ENST00000492545 TAF4BQ92750 862 aa25.27■■□□□ 1.64
CTDSP1-211ENST00000492545 MYLPFQ96A32 169 aa25.27■■□□□ 1.64
CTDSP1-211ENST00000492545 SEMA4AQ9H3S1 761 aa25.27■■□□□ 1.64
CTDSP1-211ENST00000492545 RMND1Q9NWS8 449 aa25.27■■□□□ 1.64
CTDSP1-211ENST00000492545 PIAS3Q9Y6X2 628 aa25.27■■□□□ 1.64
CTDSP1-211ENST00000492545 TRIM66O15016 1216 aa25.26■■□□□ 1.63
CTDSP1-211ENST00000492545 PTPN1P18031 435 aaKnown RBP25.26■■□□□ 1.63
CTDSP1-211ENST00000492545 TARSP26639 723 aaKnown RBP25.26■■□□□ 1.63
CTDSP1-211ENST00000492545 CYP27A1Q02318 531 aa25.26■■□□□ 1.63
CTDSP1-211ENST00000492545 ZNF699Q32M78 642 aa25.26■■□□□ 1.63
CTDSP1-211ENST00000492545 ZACNQ401N2 412 aa25.26■■□□□ 1.63
CTDSP1-211ENST00000492545 ZNF667Q5HYK9 610 aa25.26■■□□□ 1.63
CTDSP1-211ENST00000492545 INTS8Q75QN2 995 aaKnown RBP25.26■■□□□ 1.63
CTDSP1-211ENST00000492545 FAM3CQ92520 227 aa25.26■■□□□ 1.63
CTDSP1-211ENST00000492545 PCED1BQ96HM7 432 aa25.26■■□□□ 1.63
CTDSP1-211ENST00000492545 IER2Q9BTL4 223 aa25.26■■□□□ 1.63
CTDSP1-211ENST00000492545 GTPBP4Q9BZE4 634 aaKnown RBP25.26■■□□□ 1.63
CTDSP1-211ENST00000492545 KIF9Q9HAQ2 790 aa25.26■■□□□ 1.63
CTDSP1-211ENST00000492545 SHISA7A6NL88 538 aa25.25■■□□□ 1.63
CTDSP1-211ENST00000492545 A8MXQ7 604 aa25.25■■□□□ 1.63
CTDSP1-211ENST00000492545 LRRN2O75325 713 aa25.25■■□□□ 1.63
CTDSP1-211ENST00000492545 BDNFP23560 247 aa25.25■■□□□ 1.63
CTDSP1-211ENST00000492545 NR2F2P24468 414 aa25.25■■□□□ 1.63
CTDSP1-211ENST00000492545 ANXA13P27216 316 aa25.25■■□□□ 1.63
CTDSP1-211ENST00000492545 GRIK1P39086 918 aa25.25■■□□□ 1.63
CTDSP1-211ENST00000492545 ZNF268Q14587 947 aaPredicted RBP25.25■■□□□ 1.63
CTDSP1-211ENST00000492545 SDHAF4Q5VUM1 108 aa25.25■■□□□ 1.63
CTDSP1-211ENST00000492545 MAB21L3Q8N8X9 362 aa25.25■■□□□ 1.63
CTDSP1-211ENST00000492545 LRRC3BQ96PB8 259 aa25.25■■□□□ 1.63
CTDSP1-211ENST00000492545 HOOK1Q9UJC3 728 aaKnown RBP25.25■■□□□ 1.63
CTDSP1-211ENST00000492545 NCANO14594 1321 aa25.25■■□□□ 1.63
CTDSP1-211ENST00000492545 GFRA3O60609 400 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms