RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 SDCBP2Q9H190 292 aa26.37■■□□□ 1.81
UPF3A-209ENST00000492270 TBC1D17Q9HA65 648 aa26.37■■□□□ 1.81
UPF3A-209ENST00000492270 HOOK1Q9UJC3 728 aaKnown RBP26.37■■□□□ 1.81
UPF3A-209ENST00000492270 MAGED2Q9UNF1 606 aaPredicted RBP26.37■■□□□ 1.81
UPF3A-209ENST00000492270 IKBKBO14920 756 aa26.36■■□□□ 1.81
UPF3A-209ENST00000492270 FGF19O95750 216 aa26.36■■□□□ 1.81
UPF3A-209ENST00000492270 AOC1P19801 751 aa26.36■■□□□ 1.81
UPF3A-209ENST00000492270 GCLMP48507 274 aa26.36■■□□□ 1.81
UPF3A-209ENST00000492270 PMS1P54277 932 aaKnown RBP26.36■■□□□ 1.81
UPF3A-209ENST00000492270 RPL10AP62906 217 aaKnown RBP26.36■■□□□ 1.81
UPF3A-209ENST00000492270 COBLL1Q53SF7 1204 aa26.36■■□□□ 1.81
UPF3A-209ENST00000492270 SPOPLQ6IQ16 392 aa26.36■■□□□ 1.81
UPF3A-209ENST00000492270 C4orf50Q6ZRC1 276 aa26.36■■□□□ 1.81
UPF3A-209ENST00000492270 TMEM150AQ86TG1 271 aa26.36■■□□□ 1.81
UPF3A-209ENST00000492270 PCED1BQ96HM7 432 aa26.36■■□□□ 1.81
UPF3A-209ENST00000492270 FUBP3Q96I24 572 aaKnown RBP eCLIP26.36■■□□□ 1.81
UPF3A-209ENST00000492270 GPR88Q9GZN0 384 aa26.36■■□□□ 1.81
UPF3A-209ENST00000492270 KCNH6Q9H252 994 aa26.36■■□□□ 1.81
UPF3A-209ENST00000492270 MMRN2Q9H8L6 949 aa26.36■■□□□ 1.81
UPF3A-209ENST00000492270 TRPV4Q9HBA0 871 aa26.36■■□□□ 1.81
UPF3A-209ENST00000492270 UTP3Q9NQZ2 479 aaKnown RBP eCLIP26.36■■□□□ 1.81
UPF3A-209ENST00000492270 MAGEC2Q9UBF1 373 aaPredicted RBP26.36■■□□□ 1.81
UPF3A-209ENST00000492270 TRIM49BA6NDI0 452 aa26.35■■□□□ 1.81
UPF3A-209ENST00000492270 A8MXQ7 604 aa26.35■■□□□ 1.81
UPF3A-209ENST00000492270 STK25O00506 426 aa26.35■■□□□ 1.81
UPF3A-209ENST00000492270 HLA-DRAP01903 254 aa26.35■■□□□ 1.81
UPF3A-209ENST00000492270 KRT13P13646 458 aa26.35■■□□□ 1.81
UPF3A-209ENST00000492270 BDNFP23560 247 aa26.35■■□□□ 1.81
UPF3A-209ENST00000492270 CDC25CP30307 473 aa26.35■■□□□ 1.81
UPF3A-209ENST00000492270 PLA2G5P39877 138 aa26.35■■□□□ 1.81
UPF3A-209ENST00000492270 PIK3CAP42336 1068 aa26.35■■□□□ 1.81
UPF3A-209ENST00000492270 CLCN5P51795 746 aa26.35■■□□□ 1.81
UPF3A-209ENST00000492270 CYP27A1Q02318 531 aa26.35■■□□□ 1.81
UPF3A-209ENST00000492270 MYCBPAPQ8TBZ2 947 aa26.35■■□□□ 1.81
UPF3A-209ENST00000492270 MAN1B1Q9UKM7 699 aa26.35■■□□□ 1.81
UPF3A-209ENST00000492270 HELZP42694 1942 aaKnown RBP26.35■■□□□ 1.81
UPF3A-209ENST00000492270 SLC38A8A6NNN8 435 aa26.34■■□□□ 1.81
UPF3A-209ENST00000492270 FAM163BP0C2L3 166 aa26.34■■□□□ 1.81
UPF3A-209ENST00000492270 CSH1P0DML2 217 aa26.34■■□□□ 1.81
UPF3A-209ENST00000492270 CSH2P0DML3 217 aa26.34■■□□□ 1.81
UPF3A-209ENST00000492270 PTPN1P18031 435 aaKnown RBP26.34■■□□□ 1.81
UPF3A-209ENST00000492270 ANP32AP39687 249 aaKnown RBP26.34■■□□□ 1.81
UPF3A-209ENST00000492270 MAGEA11P43364 429 aa26.34■■□□□ 1.81
UPF3A-209ENST00000492270 ARHGAP15Q53QZ3 475 aa26.34■■□□□ 1.81
UPF3A-209ENST00000492270 ANKRD40Q6AI12 368 aa26.34■■□□□ 1.81
UPF3A-209ENST00000492270 ARID3BQ8IVW6 561 aaPredicted RBP26.34■■□□□ 1.81
UPF3A-209ENST00000492270 ELOA2Q8IYF1 753 aaPredicted RBP26.34■■□□□ 1.81
UPF3A-209ENST00000492270 ADSSL1Q8N142 457 aa26.34■■□□□ 1.81
UPF3A-209ENST00000492270 FAM122AQ96E09 287 aa26.34■■□□□ 1.81
UPF3A-209ENST00000492270 GCNAQ96QF7 691 aa26.34■■□□□ 1.81
UPF3A-209ENST00000492270 HEPACAM2A8MVW5 462 aa26.33■■□□□ 1.81
UPF3A-209ENST00000492270 PRAMEF12O95522 483 aa26.33■■□□□ 1.81
UPF3A-209ENST00000492270 ASS1P00966 412 aaKnown RBP26.33■■□□□ 1.81
UPF3A-209ENST00000492270 F11P03951 625 aa26.33■■□□□ 1.81
UPF3A-209ENST00000492270 CD44P16070 742 aaKnown RBP26.33■■□□□ 1.81
UPF3A-209ENST00000492270 RFX1P22670 979 aa26.33■■□□□ 1.81
UPF3A-209ENST00000492270 NLRP12P59046 1061 aa26.33■■□□□ 1.81
UPF3A-209ENST00000492270 TCF15Q12870 199 aa26.33■■□□□ 1.81
UPF3A-209ENST00000492270 MAPRE1Q15691 268 aaKnown RBP26.33■■□□□ 1.81
UPF3A-209ENST00000492270 MLF2Q15773 248 aaPredicted RBP26.33■■□□□ 1.81
UPF3A-209ENST00000492270 SGSM1Q2NKQ1 1148 aa26.33■■□□□ 1.81
UPF3A-209ENST00000492270 SLC44A4Q53GD3 710 aa26.33■■□□□ 1.81
UPF3A-209ENST00000492270 TAS1R2Q8TE23 839 aa26.33■■□□□ 1.81
UPF3A-209ENST00000492270 TRMT61BQ9BVS5 477 aaKnown RBP26.33■■□□□ 1.81
UPF3A-209ENST00000492270 FOXQ1Q9C009 403 aa26.33■■□□□ 1.81
UPF3A-209ENST00000492270 CETN3O15182 167 aa26.32■■□□□ 1.8
UPF3A-209ENST00000492270 LRRN2O75325 713 aa26.32■■□□□ 1.8
UPF3A-209ENST00000492270 TADA3O75528 432 aa26.32■■□□□ 1.8
UPF3A-209ENST00000492270 NOL4O94818 638 aa26.32■■□□□ 1.8
UPF3A-209ENST00000492270 PSMC3P17980 439 aa26.32■■□□□ 1.8
UPF3A-209ENST00000492270 GDI1P31150 447 aa26.32■■□□□ 1.8
UPF3A-209ENST00000492270 PFKPQ01813 784 aa26.32■■□□□ 1.8
UPF3A-209ENST00000492270 B3GALNT2Q8NCR0 500 aa26.32■■□□□ 1.8
UPF3A-209ENST00000492270 TSG101Q99816 390 aa26.32■■□□□ 1.8
UPF3A-209ENST00000492270 SLC46A2Q9BY10 475 aa26.32■■□□□ 1.8
UPF3A-209ENST00000492270 SMG9Q9H0W8 520 aaKnown RBP26.32■■□□□ 1.8
UPF3A-209ENST00000492270 TASP1Q9H6P5 420 aa26.32■■□□□ 1.8
UPF3A-209ENST00000492270 BRD9Q9H8M2 597 aa26.32■■□□□ 1.8
UPF3A-209ENST00000492270 HEBP1Q9NRV9 189 aa26.32■■□□□ 1.8
UPF3A-209ENST00000492270 TMEM30AQ9NV96 361 aa26.32■■□□□ 1.8
UPF3A-209ENST00000492270 PATJQ8NI35 1801 aa26.31■■□□□ 1.8
UPF3A-209ENST00000492270 EPB41P11171 864 aaKnown RBP26.31■■□□□ 1.8
UPF3A-209ENST00000492270 BMP6P22004 513 aa26.31■■□□□ 1.8
UPF3A-209ENST00000492270 GRIK1P39086 918 aa26.31■■□□□ 1.8
UPF3A-209ENST00000492270 ASPAP45381 313 aa26.31■■□□□ 1.8
UPF3A-209ENST00000492270 CACNA2D1P54289 1103 aa26.31■■□□□ 1.8
UPF3A-209ENST00000492270 STARD6P59095 220 aa26.31■■□□□ 1.8
UPF3A-209ENST00000492270 ENPEPQ07075 957 aa26.31■■□□□ 1.8
UPF3A-209ENST00000492270 PHLDB3Q6NSJ2 640 aa26.31■■□□□ 1.8
UPF3A-209ENST00000492270 VSTM1Q6UX27 236 aa26.31■■□□□ 1.8
UPF3A-209ENST00000492270 MFSD6LQ8IWD5 586 aa26.31■■□□□ 1.8
UPF3A-209ENST00000492270 ZC3H3Q8IXZ2 948 aaKnown RBP26.31■■□□□ 1.8
UPF3A-209ENST00000492270 DEPDC1BQ8WUY9 529 aa26.31■■□□□ 1.8
UPF3A-209ENST00000492270 TAF4BQ92750 862 aa26.31■■□□□ 1.8
UPF3A-209ENST00000492270 LRRC3BQ96PB8 259 aa26.31■■□□□ 1.8
UPF3A-209ENST00000492270 ZNF518BQ9C0D4 1074 aa26.31■■□□□ 1.8
UPF3A-209ENST00000492270 APOBEC3GQ9HC16 384 aaKnown RBP26.31■■□□□ 1.8
UPF3A-209ENST00000492270 HMGXB4Q9UGU5 601 aa26.31■■□□□ 1.8
UPF3A-209ENST00000492270 BIN1O00499 593 aa26.3■■□□□ 1.8
UPF3A-209ENST00000492270 CLDN5O00501 218 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms