RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 TIMM13Q9Y5L4 95 aaPredicted RBP12.72□□□□□ -0.37
CACNA1C-228ENST00000492150 HELZP42694 1942 aaKnown RBP12.72□□□□□ -0.37
CACNA1C-228ENST00000492150 E9PMD0 336 aa12.71□□□□□ -0.37
CACNA1C-228ENST00000492150 SYPP08247 313 aa12.71□□□□□ -0.37
CACNA1C-228ENST00000492150 AMPD2Q01433 879 aa12.71□□□□□ -0.37
CACNA1C-228ENST00000492150 TNK2Q07912 1038 aa12.71□□□□□ -0.37
CACNA1C-228ENST00000492150 DUSP4Q13115 394 aa12.71□□□□□ -0.37
CACNA1C-228ENST00000492150 GPR17Q13304 367 aa12.71□□□□□ -0.37
CACNA1C-228ENST00000492150 DMP1Q13316 513 aaPredicted RBP12.71□□□□□ -0.37
CACNA1C-228ENST00000492150 SAFBQ15424 915 aaKnown RBP eCLIP12.71□□□□□ -0.37
CACNA1C-228ENST00000492150 GAREM2Q75VX8 874 aa12.71□□□□□ -0.37
CACNA1C-228ENST00000492150 FMNL3Q8IVF7 1028 aa12.71□□□□□ -0.37
CACNA1C-228ENST00000492150 PGLYRP2Q96PD5 576 aa12.71□□□□□ -0.37
CACNA1C-228ENST00000492150 RUSC1Q9BVN2 902 aa12.71□□□□□ -0.37
CACNA1C-228ENST00000492150 KMT5AQ9NQR1 393 aa12.71□□□□□ -0.37
CACNA1C-228ENST00000492150 TOR4AQ9NXH8 423 aa12.71□□□□□ -0.37
CACNA1C-228ENST00000492150 PCOLCE2Q9UKZ9 415 aa12.71□□□□□ -0.37
CACNA1C-228ENST00000492150 RELNP78509 3460 aa12.71□□□□□ -0.37
CACNA1C-228ENST00000492150 SFI1A8K8P3 1242 aa12.7□□□□□ -0.38
CACNA1C-228ENST00000492150 SLC16A4O15374 487 aa12.7□□□□□ -0.38
CACNA1C-228ENST00000492150 WEE1P30291 646 aa12.7□□□□□ -0.38
CACNA1C-228ENST00000492150 LRPAP1P30533 357 aa12.7□□□□□ -0.38
CACNA1C-228ENST00000492150 P2RY2P41231 377 aa12.7□□□□□ -0.38
CACNA1C-228ENST00000492150 AARSP49588 968 aaKnown RBP eCLIP12.7□□□□□ -0.38
CACNA1C-228ENST00000492150 EPHB3P54753 998 aa12.7□□□□□ -0.38
CACNA1C-228ENST00000492150 YWHAHQ04917 246 aaPredicted RBP12.7□□□□□ -0.38
CACNA1C-228ENST00000492150 SPAG1Q07617 926 aa12.7□□□□□ -0.38
CACNA1C-228ENST00000492150 PLD1Q13393 1074 aa12.7□□□□□ -0.38
CACNA1C-228ENST00000492150 SERINC3Q13530 473 aa12.7□□□□□ -0.38
CACNA1C-228ENST00000492150 PDIA5Q14554 519 aa12.7□□□□□ -0.38
CACNA1C-228ENST00000492150 PKDCCQ504Y2 493 aa12.7□□□□□ -0.38
CACNA1C-228ENST00000492150 TTC38Q5R3I4 469 aa12.7□□□□□ -0.38
CACNA1C-228ENST00000492150 CENPPQ6IPU0 288 aa12.7□□□□□ -0.38
CACNA1C-228ENST00000492150 RINT1Q6NUQ1 792 aa12.7□□□□□ -0.38
CACNA1C-228ENST00000492150 C1orf186Q6ZWK4 172 aa12.7□□□□□ -0.38
CACNA1C-228ENST00000492150 IGSF22Q8N9C0 903 aa12.7□□□□□ -0.38
CACNA1C-228ENST00000492150 SNX29Q8TEQ0 813 aa12.7□□□□□ -0.38
CACNA1C-228ENST00000492150 BAP1Q92560 729 aa12.7□□□□□ -0.38
CACNA1C-228ENST00000492150 EXOC4Q96A65 974 aa12.7□□□□□ -0.38
CACNA1C-228ENST00000492150 NXPE2Q96DL1 559 aa12.7□□□□□ -0.38
CACNA1C-228ENST00000492150 SPACA7Q96KW9 195 aa12.7□□□□□ -0.38
CACNA1C-228ENST00000492150 FNBP1Q96RU3 617 aa12.7□□□□□ -0.38
CACNA1C-228ENST00000492150 NTPCRQ9BSD7 190 aaKnown RBP12.7□□□□□ -0.38
CACNA1C-228ENST00000492150 OXCT2Q9BYC2 517 aaPredicted RBP12.7□□□□□ -0.38
CACNA1C-228ENST00000492150 HAPLN2Q9GZV7 340 aa12.7□□□□□ -0.38
CACNA1C-228ENST00000492150 FSCN3Q9NQT6 498 aa12.7□□□□□ -0.38
CACNA1C-228ENST00000492150 SLC27A5Q9Y2P5 690 aa12.7□□□□□ -0.38
CACNA1C-228ENST00000492150 ATXN2Q99700 1313 aaKnown RBP12.69□□□□□ -0.38
CACNA1C-228ENST00000492150 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.69□□□□□ -0.38
CACNA1C-228ENST00000492150 OR6C75A6NL08 312 aa12.69□□□□□ -0.38
CACNA1C-228ENST00000492150 DPYSL4O14531 572 aa12.69□□□□□ -0.38
CACNA1C-228ENST00000492150 TLX3O43711 291 aaPredicted RBP12.69□□□□□ -0.38
CACNA1C-228ENST00000492150 TOM1L1O75674 476 aa12.69□□□□□ -0.38
CACNA1C-228ENST00000492150 SOAT2O75908 522 aa12.69□□□□□ -0.38
CACNA1C-228ENST00000492150 PRAMEF12O95522 483 aa12.69□□□□□ -0.38
CACNA1C-228ENST00000492150 CXCL8P10145 99 aa12.69□□□□□ -0.38
CACNA1C-228ENST00000492150 HLA-EP13747 358 aa12.69□□□□□ -0.38
CACNA1C-228ENST00000492150 ALDH1A3P47895 512 aa12.69□□□□□ -0.38
CACNA1C-228ENST00000492150 NBR1Q14596 966 aa12.69□□□□□ -0.38
CACNA1C-228ENST00000492150 NOLC1Q14978 699 aaKnown RBP eCLIP12.69□□□□□ -0.38
CACNA1C-228ENST00000492150 SMAD1Q15797 465 aaKnown RBP12.69□□□□□ -0.38
CACNA1C-228ENST00000492150 ZBTB6Q15916 424 aa12.69□□□□□ -0.38
CACNA1C-228ENST00000492150 KCNK18Q7Z418 384 aa12.69□□□□□ -0.38
CACNA1C-228ENST00000492150 DNAJB7Q7Z6W7 309 aaPredicted RBP12.69□□□□□ -0.38
CACNA1C-228ENST00000492150 TTC9BQ8N6N2 239 aa12.69□□□□□ -0.38
CACNA1C-228ENST00000492150 ATAD1Q8NBU5 361 aa12.69□□□□□ -0.38
CACNA1C-228ENST00000492150 TMEM161BQ8NDZ6 487 aa12.69□□□□□ -0.38
CACNA1C-228ENST00000492150 MDGA1Q8NFP4 955 aa12.69□□□□□ -0.38
CACNA1C-228ENST00000492150 CCDC26Q8TAB7 109 aa12.69□□□□□ -0.38
CACNA1C-228ENST00000492150 SNIP1Q8TAD8 396 aaKnown RBP12.69□□□□□ -0.38
CACNA1C-228ENST00000492150 BAHD1Q8TBE0 780 aaPredicted RBP12.69□□□□□ -0.38
CACNA1C-228ENST00000492150 BPIFB1Q8TDL5 484 aa12.69□□□□□ -0.38
CACNA1C-228ENST00000492150 PSMG2Q969U7 264 aa12.69□□□□□ -0.38
CACNA1C-228ENST00000492150 DRC1Q96MC2 740 aa12.69□□□□□ -0.38
CACNA1C-228ENST00000492150 FOXP1Q9H334 677 aaPredicted RBP12.69□□□□□ -0.38
CACNA1C-228ENST00000492150 ATXN3LQ9H3M9 355 aa12.69□□□□□ -0.38
CACNA1C-228ENST00000492150 C17orf75Q9HAS0 396 aa12.69□□□□□ -0.38
CACNA1C-228ENST00000492150 DNM3Q9UQ16 869 aa12.69□□□□□ -0.38
CACNA1C-228ENST00000492150 ASB3Q9Y575 518 aa12.69□□□□□ -0.38
CACNA1C-228ENST00000492150 TTC26A0AVF1 554 aa12.68□□□□□ -0.38
CACNA1C-228ENST00000492150 MTMR11A4FU01 709 aa12.68□□□□□ -0.38
CACNA1C-228ENST00000492150 PP2D1A8MPX8 630 aa12.68□□□□□ -0.38
CACNA1C-228ENST00000492150 ITPKAP23677 461 aa12.68□□□□□ -0.38
CACNA1C-228ENST00000492150 GABRR2P28476 465 aa12.68□□□□□ -0.38
CACNA1C-228ENST00000492150 MCM2P49736 904 aa12.68□□□□□ -0.38
CACNA1C-228ENST00000492150 GUCY2FP51841 1108 aa12.68□□□□□ -0.38
CACNA1C-228ENST00000492150 MCL1Q07820 350 aa12.68□□□□□ -0.38
CACNA1C-228ENST00000492150 MYBPC2Q14324 1141 aa12.68□□□□□ -0.38
CACNA1C-228ENST00000492150 GPR158Q5T848 1215 aa12.68□□□□□ -0.38
CACNA1C-228ENST00000492150 ANO7Q6IWH7 933 aa12.68□□□□□ -0.38
CACNA1C-228ENST00000492150 ARMCX6Q7L4S7 300 aa12.68□□□□□ -0.38
CACNA1C-228ENST00000492150 USP37Q86T82 979 aa12.68□□□□□ -0.38
CACNA1C-228ENST00000492150 OR2I1PQ8NGU4 316 aa12.68□□□□□ -0.38
CACNA1C-228ENST00000492150 SPIRE2Q8WWL2 714 aa12.68□□□□□ -0.38
CACNA1C-228ENST00000492150 C8orf76Q96K31 380 aa12.68□□□□□ -0.38
CACNA1C-228ENST00000492150 PLEKHA5Q9HAU0 1116 aa12.68□□□□□ -0.38
CACNA1C-228ENST00000492150 PPEF2O14830 753 aa12.67□□□□□ -0.38
CACNA1C-228ENST00000492150 CLDN3O15551 220 aa12.67□□□□□ -0.38
CACNA1C-228ENST00000492150 CLTAP09496 248 aa12.67□□□□□ -0.38
CACNA1C-228ENST00000492150 MAPTP10636 758 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms