RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 HUS1O60921 280 aa9.55□□□□□ -0.88
HDAC3-211ENST00000491581 LILRB5O75023 590 aa9.55□□□□□ -0.88
HDAC3-211ENST00000491581 EGFP01133 1207 aa9.55□□□□□ -0.88
HDAC3-211ENST00000491581 TGM1P22735 817 aa9.55□□□□□ -0.88
HDAC3-211ENST00000491581 RPS9P46781 194 aaKnown RBP9.55□□□□□ -0.88
HDAC3-211ENST00000491581 ME1P48163 572 aa9.55□□□□□ -0.88
HDAC3-211ENST00000491581 TUFMP49411 452 aaKnown RBP9.55□□□□□ -0.88
HDAC3-211ENST00000491581 PGFP49763 221 aa9.55□□□□□ -0.88
HDAC3-211ENST00000491581 MYL6P60660 151 aa9.55□□□□□ -0.88
HDAC3-211ENST00000491581 RBP5P82980 135 aa9.55□□□□□ -0.88
HDAC3-211ENST00000491581 CYP27A1Q02318 531 aa9.55□□□□□ -0.88
HDAC3-211ENST00000491581 MESP2Q0VG99 397 aa9.55□□□□□ -0.88
HDAC3-211ENST00000491581 VEPH1Q14D04 833 aa9.55□□□□□ -0.88
HDAC3-211ENST00000491581 TAF12Q16514 161 aa9.55□□□□□ -0.88
HDAC3-211ENST00000491581 MDH1BQ5I0G3 518 aa9.55□□□□□ -0.88
HDAC3-211ENST00000491581 RESP18Q5W5W9 173 aa9.55□□□□□ -0.88
HDAC3-211ENST00000491581 FSTL4Q6MZW2 842 aa9.55□□□□□ -0.88
HDAC3-211ENST00000491581 SCARA5Q6ZMJ2 495 aa9.55□□□□□ -0.88
HDAC3-211ENST00000491581 TRAPPC11Q7Z392 1133 aa9.55□□□□□ -0.88
HDAC3-211ENST00000491581 LEMD2Q8NC56 503 aa9.55□□□□□ -0.88
HDAC3-211ENST00000491581 KIAA0895Q8NCT3 520 aa9.55□□□□□ -0.88
HDAC3-211ENST00000491581 SPPL2BQ8TCT7 592 aa9.55□□□□□ -0.88
HDAC3-211ENST00000491581 SNX21Q969T3 373 aa9.55□□□□□ -0.88
HDAC3-211ENST00000491581 MMS19Q96T76 1030 aa9.55□□□□□ -0.88
HDAC3-211ENST00000491581 C7orf25Q9BPX7 421 aa9.55□□□□□ -0.88
HDAC3-211ENST00000491581 SYT15Q9BQS2 421 aa9.55□□□□□ -0.88
HDAC3-211ENST00000491581 OSBPL6Q9BZF3 934 aa9.55□□□□□ -0.88
HDAC3-211ENST00000491581 LINC00597Q9H2U6 94 aa9.55□□□□□ -0.88
HDAC3-211ENST00000491581 GDPD2Q9HCC8 539 aa9.55□□□□□ -0.88
HDAC3-211ENST00000491581 ZDHHC4Q9NPG8 344 aa9.55□□□□□ -0.88
HDAC3-211ENST00000491581 GDAP2Q9NXN4 497 aa9.55□□□□□ -0.88
HDAC3-211ENST00000491581 FBXO4Q9UKT5 387 aa9.55□□□□□ -0.88
HDAC3-211ENST00000491581 ITGA11Q9UKX5 1188 aa9.55□□□□□ -0.88
HDAC3-211ENST00000491581 DSEQ9UL01 958 aa9.55□□□□□ -0.88
HDAC3-211ENST00000491581 MAFFQ9ULX9 164 aa9.55□□□□□ -0.88
HDAC3-211ENST00000491581 SMG5Q9UPR3 1016 aaKnown RBP9.55□□□□□ -0.88
HDAC3-211ENST00000491581 MYOFQ9NZM1 2061 aa9.55□□□□□ -0.88
HDAC3-211ENST00000491581 ZNF233A6NK53 670 aa9.54□□□□□ -0.88
HDAC3-211ENST00000491581 YEATS4O95619 227 aa9.54□□□□□ -0.88
HDAC3-211ENST00000491581 TNNI1P19237 187 aa9.54□□□□□ -0.88
HDAC3-211ENST00000491581 TSPY1Q01534 308 aa9.54□□□□□ -0.88
HDAC3-211ENST00000491581 CYP24A1Q07973 514 aa9.54□□□□□ -0.88
HDAC3-211ENST00000491581 SPEM2Q0P670 501 aa9.54□□□□□ -0.88
HDAC3-211ENST00000491581 STK4Q13043 487 aa9.54□□□□□ -0.88
HDAC3-211ENST00000491581 CCINQ13939 588 aa9.54□□□□□ -0.88
HDAC3-211ENST00000491581 SNRNP35Q16560 246 aaKnown RBP9.54□□□□□ -0.88
HDAC3-211ENST00000491581 ARHGAP15Q53QZ3 475 aa9.54□□□□□ -0.88
HDAC3-211ENST00000491581 SPOPLQ6IQ16 392 aa9.54□□□□□ -0.88
HDAC3-211ENST00000491581 FAM171BQ6P995 826 aa9.54□□□□□ -0.88
HDAC3-211ENST00000491581 PRR23BQ6ZRT6 265 aa9.54□□□□□ -0.88
HDAC3-211ENST00000491581 UNC13DQ70J99 1090 aa9.54□□□□□ -0.88
HDAC3-211ENST00000491581 LIMS2Q7Z4I7 341 aa9.54□□□□□ -0.88
HDAC3-211ENST00000491581 ITIH5Q86UX2 942 aa9.54□□□□□ -0.88
HDAC3-211ENST00000491581 SPATA2LQ8IUW3 424 aaPredicted RBP9.54□□□□□ -0.88
HDAC3-211ENST00000491581 DCP1BQ8IZD4 617 aaKnown RBP9.54□□□□□ -0.88
HDAC3-211ENST00000491581 LRRC52Q8N7C0 313 aa9.54□□□□□ -0.88
HDAC3-211ENST00000491581 ATRIPQ8WXE1 791 aa9.54□□□□□ -0.88
HDAC3-211ENST00000491581 RUBCNQ92622 972 aa9.54□□□□□ -0.88
HDAC3-211ENST00000491581 WBP2Q969T9 261 aa9.54□□□□□ -0.88
HDAC3-211ENST00000491581 PCED1BQ96HM7 432 aa9.54□□□□□ -0.88
HDAC3-211ENST00000491581 ANKRD36BP1Q96IX9 119 aa9.54□□□□□ -0.88
HDAC3-211ENST00000491581 ZNF396Q96N95 335 aaPredicted RBP9.54□□□□□ -0.88
HDAC3-211ENST00000491581 TSPAN18Q96SJ8 248 aa9.54□□□□□ -0.88
HDAC3-211ENST00000491581 FAM83CQ9BQN1 747 aa9.54□□□□□ -0.88
HDAC3-211ENST00000491581 ACBD6Q9BR61 282 aa9.54□□□□□ -0.88
HDAC3-211ENST00000491581 OXCT2Q9BYC2 517 aaPredicted RBP9.54□□□□□ -0.88
HDAC3-211ENST00000491581 ZNF518BQ9C0D4 1074 aa9.54□□□□□ -0.88
HDAC3-211ENST00000491581 SMOC1Q9H4F8 434 aa9.54□□□□□ -0.88
HDAC3-211ENST00000491581 SMYD3Q9H7B4 428 aa9.54□□□□□ -0.88
HDAC3-211ENST00000491581 TMEM206Q9H813 350 aa9.54□□□□□ -0.88
HDAC3-211ENST00000491581 TRPV5Q9NQA5 729 aa9.54□□□□□ -0.88
HDAC3-211ENST00000491581 ZSCAN32Q9NX65 697 aa9.54□□□□□ -0.88
HDAC3-211ENST00000491581 NCDNQ9UBB6 729 aa9.54□□□□□ -0.88
HDAC3-211ENST00000491581 NXF1Q9UBU9 619 aaKnown RBP9.54□□□□□ -0.88
HDAC3-211ENST00000491581 HMGXB4Q9UGU5 601 aa9.54□□□□□ -0.88
HDAC3-211ENST00000491581 MAPK8IP1Q9UQF2 711 aa9.54□□□□□ -0.88
HDAC3-211ENST00000491581 INVSQ9Y283 1065 aa9.54□□□□□ -0.88
HDAC3-211ENST00000491581 ASB3Q9Y575 518 aa9.54□□□□□ -0.88
HDAC3-211ENST00000491581 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.54□□□□□ -0.88
HDAC3-211ENST00000491581 MORC2Q9Y6X9 1032 aaPredicted RBP9.54□□□□□ -0.88
HDAC3-211ENST00000491581 RALGAPA1Q6GYQ0 2036 aa9.53□□□□□ -0.88
HDAC3-211ENST00000491581 LRRIQ3A6PVS8 624 aaPredicted RBP9.53□□□□□ -0.88
HDAC3-211ENST00000491581 MAN2B1O00754 1011 aa9.53□□□□□ -0.88
HDAC3-211ENST00000491581 GDF9O60383 454 aa9.53□□□□□ -0.88
HDAC3-211ENST00000491581 NOL4O94818 638 aa9.53□□□□□ -0.88
HDAC3-211ENST00000491581 VNN1O95497 513 aa9.53□□□□□ -0.88
HDAC3-211ENST00000491581 LDHAP00338 332 aaKnown RBP9.53□□□□□ -0.88
HDAC3-211ENST00000491581 TNNC2P02585 160 aa9.53□□□□□ -0.88
HDAC3-211ENST00000491581 PFKFB1P16118 471 aa9.53□□□□□ -0.88
HDAC3-211ENST00000491581 SCP2P22307 547 aa9.53□□□□□ -0.88
HDAC3-211ENST00000491581 CDC25CP30307 473 aa9.53□□□□□ -0.88
HDAC3-211ENST00000491581 MYL7Q01449 175 aa9.53□□□□□ -0.88
HDAC3-211ENST00000491581 RUNX3Q13761 415 aa9.53□□□□□ -0.88
HDAC3-211ENST00000491581 RSPO4Q2I0M5 234 aaPredicted RBP9.53□□□□□ -0.88
HDAC3-211ENST00000491581 ZNF528Q3MIS6 628 aa9.53□□□□□ -0.88
HDAC3-211ENST00000491581 KMT5BQ4FZB7 885 aa9.53□□□□□ -0.88
HDAC3-211ENST00000491581 ARHGAP29Q52LW3 1261 aa9.53□□□□□ -0.88
HDAC3-211ENST00000491581 TDRD10Q5VZ19 366 aaKnown RBP9.53□□□□□ -0.88
HDAC3-211ENST00000491581 HS2ST1Q7LGA3 356 aa9.53□□□□□ -0.88
HDAC3-211ENST00000491581 NT5DC4Q86YG4 428 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms