RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 SAP30BPQ9UHR5 308 aaKnown RBP2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 TLK1Q9UKI8 766 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 INTUQ9ULD6 942 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 TMA7Q9Y2S6 64 aaKnown RBP2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 PCDHGA2Q9Y5H1 932 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 NR2E3Q9Y5X4 410 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 METP08581 1390 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 FLT4P35916 1363 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 MSH6P52701 1360 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 RPAP1Q9BWH6 1393 aaPredicted RBP2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 POLR2AP24928 1970 aaKnown RBP2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 RGS12O14924 1447 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 ATP10DQ9P241 1426 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 KAT6AQ92794 2004 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 AGLP35573 1532 aa2.32□□□□□ -2.04
SNRNP40-207ENST00000491106 ITSN1Q15811 1721 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 KNDC1Q76NI1 1749 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 MON2Q7Z3U7 1717 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 RGPD8O14715 1765 aaPredicted RBP2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 CHD2O14647 1828 aaKnown RBP2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 KAT6BQ8WYB5 2073 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 TCRBV7S2A1N4TA0A589 114 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 VPS37CA5D8V6 355 aaPredicted RBP2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 GOLGA6L9A6NEM1 432 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 IKBKBO14920 756 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 AP5Z1O43299 807 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 ADCY6O43306 1168 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 ZSCAN12O43309 604 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 FIBPO43427 364 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 BRINP1O60477 761 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 KINO60870 393 aaKnown RBP2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 PPP6R2O75170 966 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 SEC24DO94855 1032 aaPredicted RBP2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 SLU7O95391 586 aaKnown RBP2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 ZFYP08048 801 aaPredicted RBP2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 CKBP12277 381 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 OSMP13725 252 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 KRT4P19013 534 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 ENPP1P22413 925 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 CCND1P24385 295 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 PDIA3P30101 505 aaKnown RBP2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 CRHR1P34998 444 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 BMPR1AP36894 532 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 FLT3LGP49771 235 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 SLC5A3P53794 718 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 ELLP55199 621 aaPredicted RBP2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 HSD11B2P80365 405 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 MRPS35P82673 323 aaKnown RBP2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 FPGSQ05932 587 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 GCKRQ14397 625 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 PPP2R5BQ15173 497 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 DHCR24Q15392 516 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 FSCN1Q16658 493 aaKnown RBP2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 KRTAP15-1Q3LI76 137 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 PREPLQ4J6C6 727 aaPredicted RBP2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 CCDC93Q567U6 631 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 ABHD17BQ5VST6 288 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 JAKMIP3Q5VZ66 844 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 AFMIDQ63HM1 303 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 FBXO42Q6P3S6 717 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 DRICH1Q6PGQ1 229 aaPredicted RBP2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 TMED8Q6PL24 325 aaPredicted RBP2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 CCDC73Q6ZRK6 1079 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 NOL8Q76FK4 1167 aaKnown RBP2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 COPS6Q7L5N1 327 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 NOP9Q86U38 636 aaKnown RBP2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 LUZP1Q86V48 1076 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 ARHGEF19Q8IW93 802 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 CMIPQ8IY22 773 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 COLGALT2Q8IYK4 626 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 CCAR2Q8N163 923 aaKnown RBP2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 TMEM132CQ8N3T6 1108 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 FITM2Q8N6M3 262 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 KBTBD3Q8NAB2 608 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 ZNF397Q8NF99 534 aaPredicted RBP2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 OR56A1Q8NGH5 318 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 PPP1R14CQ8TAE6 165 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 WDR66Q8TBY9 1149 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 TBC1D15Q8TC07 691 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 ERO1AQ96HE7 468 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 KAZALD1Q96I82 304 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 Q96MF0 132 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 SLC2A13Q96QE2 648 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 MPHOSPH8Q99549 860 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 C7orf25Q9BPX7 421 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 AIFM2Q9BRQ8 373 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 KRTAP17-1Q9BYP8 105 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 SLC29A3Q9BZD2 475 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 RNPEPQ9H4A4 650 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 PRDM12Q9H4Q4 367 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 GREM2Q9H772 168 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 LANCL2Q9NS86 450 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 RBM12Q9NTZ6 932 aaKnown RBP2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 C14orf119Q9NWQ9 140 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 CALCOCO1Q9P1Z2 691 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 CLIP2Q9UDT6 1046 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 NRBP1Q9UHY1 535 aa2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 HOOK1Q9UJC3 728 aaKnown RBP2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 AJAP1Q9UKB5 411 aaPredicted RBP2.31□□□□□ -2.04
SNRNP40-207ENST00000491106 V9GYY5 206 aaPredicted RBP2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms