RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 ZNF473Q8WTR7 871 aaKnown RBP7.7□□□□□ -1.18
NPHP3-208ENST00000490993 CCT8L2Q96SF2 557 aa7.7□□□□□ -1.18
NPHP3-208ENST00000490993 PRDM16Q9HAZ2 1276 aa7.7□□□□□ -1.18
NPHP3-208ENST00000490993 TXLNGQ9NUQ3 528 aa7.7□□□□□ -1.18
NPHP3-208ENST00000490993 PSMC3IPQ9P2W1 217 aaPredicted RBP7.7□□□□□ -1.18
NPHP3-208ENST00000490993 MID2Q9UJV3 735 aa7.7□□□□□ -1.18
NPHP3-208ENST00000490993 ADAMTS5Q9UNA0 930 aa7.7□□□□□ -1.18
NPHP3-208ENST00000490993 STXBP5LQ9Y2K9 1186 aa7.7□□□□□ -1.18
NPHP3-208ENST00000490993 GLTPD2A6NH11 291 aa7.7□□□□□ -1.18
NPHP3-208ENST00000490993 SIGLEC16A6NMB1 481 aa7.7□□□□□ -1.18
NPHP3-208ENST00000490993 GPR182O15218 404 aa7.7□□□□□ -1.18
NPHP3-208ENST00000490993 LGR5O75473 907 aa7.7□□□□□ -1.18
NPHP3-208ENST00000490993 SYF2O95926 243 aaKnown RBP7.7□□□□□ -1.18
NPHP3-208ENST00000490993 FAM153BP0C7A2 387 aa7.7□□□□□ -1.18
NPHP3-208ENST00000490993 CHN1P15882 459 aa7.7□□□□□ -1.18
NPHP3-208ENST00000490993 PTP4A2Q12974 167 aa7.7□□□□□ -1.18
NPHP3-208ENST00000490993 MFSD10Q14728 455 aa7.7□□□□□ -1.18
NPHP3-208ENST00000490993 TCEAL1Q15170 157 aa7.7□□□□□ -1.18
NPHP3-208ENST00000490993 CNGA2Q16280 664 aa7.7□□□□□ -1.18
NPHP3-208ENST00000490993 FAM153CQ494X1 144 aa7.7□□□□□ -1.18
NPHP3-208ENST00000490993 TAF2Q6P1X5 1199 aa7.7□□□□□ -1.18
NPHP3-208ENST00000490993 UNC93AQ86WB7 457 aa7.7□□□□□ -1.18
NPHP3-208ENST00000490993 BBS5Q8N3I7 341 aa7.7□□□□□ -1.18
NPHP3-208ENST00000490993 GDAP1Q8TB36 358 aa7.7□□□□□ -1.18
NPHP3-208ENST00000490993 KRT35Q92764 455 aa7.7□□□□□ -1.18
NPHP3-208ENST00000490993 PITPNM3Q9BZ71 974 aa7.7□□□□□ -1.18
NPHP3-208ENST00000490993 LHX5Q9H2C1 402 aa7.7□□□□□ -1.18
NPHP3-208ENST00000490993 UBN1Q9NPG3 1134 aa7.7□□□□□ -1.18
NPHP3-208ENST00000490993 FAM153AQ9UHL3 310 aa7.7□□□□□ -1.18
NPHP3-208ENST00000490993 KCNH4Q9UQ05 1017 aa7.7□□□□□ -1.18
NPHP3-208ENST00000490993 PPFIA2O75334 1257 aa7.7□□□□□ -1.18
NPHP3-208ENST00000490993 SERPINB6P35237 376 aa7.7□□□□□ -1.18
NPHP3-208ENST00000490993 RAP1GAPP47736 663 aa7.7□□□□□ -1.18
NPHP3-208ENST00000490993 VCPP55072 806 aaKnown RBP7.7□□□□□ -1.18
NPHP3-208ENST00000490993 INHBEP58166 350 aa7.7□□□□□ -1.18
NPHP3-208ENST00000490993 DUPD1Q68J44 220 aa7.7□□□□□ -1.18
NPHP3-208ENST00000490993 GPR142Q7Z601 462 aa7.7□□□□□ -1.18
NPHP3-208ENST00000490993 OR5B17Q8NGF7 314 aa7.7□□□□□ -1.18
NPHP3-208ENST00000490993 STRA6Q9BX79 667 aa7.7□□□□□ -1.18
NPHP3-208ENST00000490993 PCDH9Q9HC56 1237 aa7.7□□□□□ -1.18
NPHP3-208ENST00000490993 SETD4Q9NVD3 440 aa7.7□□□□□ -1.18
NPHP3-208ENST00000490993 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.7□□□□□ -1.18
NPHP3-208ENST00000490993 XPO7Q9UIA9 1087 aaKnown RBP7.7□□□□□ -1.18
NPHP3-208ENST00000490993 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.7□□□□□ -1.18
NPHP3-208ENST00000490993 ZSCAN5CA6NGD5 496 aaPredicted RBP7.69□□□□□ -1.18
NPHP3-208ENST00000490993 GOLGA8MH3BSY2 632 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 KCNN4O15554 427 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 DCTN3O75935 186 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 ATP5HO75947 161 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 MICAL2O94851 1124 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 RBP3P10745 1247 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 RPL21P46778 160 aaKnown RBP7.69□□□□□ -1.18
NPHP3-208ENST00000490993 BST2Q10589 180 aaKnown RBP7.69□□□□□ -1.18
NPHP3-208ENST00000490993 KYNUQ16719 465 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 POLNQ7Z5Q5 900 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 ZC3H18Q86VM9 953 aaKnown RBP7.69□□□□□ -1.18
NPHP3-208ENST00000490993 DNAAF3Q8N9W5 541 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 TMEM174Q8WUU8 243 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 COPS5Q92905 334 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 FAM49BQ9NUQ9 324 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 USP18Q9UMW8 372 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 POLIQ9UNA4 740 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 DRG1Q9Y295 367 aaKnown RBP7.69□□□□□ -1.18
NPHP3-208ENST00000490993 USP20Q9Y2K6 914 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 MYO1CO00159 1063 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 COPEO14579 308 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 PSMD3O43242 534 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 FBXO21O94952 628 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 PSEN2P49810 448 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 LONRF1Q17RB8 773 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 FBXO47Q5MNV8 452 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 MAP1SQ66K74 1059 aaPredicted RBP7.69□□□□□ -1.18
NPHP3-208ENST00000490993 ATG4AQ8WYN0 398 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 PGM2Q96G03 612 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 ELAC2Q9BQ52 826 aaKnown RBP7.69□□□□□ -1.18
NPHP3-208ENST00000490993 SHOC2Q9UQ13 582 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 SSX2IPQ9Y2D8 614 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 STYXL1Q9Y6J8 313 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 MYH4Q9Y623 1939 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 CYP1A1P04798 512 aaPredicted RBP7.69□□□□□ -1.18
NPHP3-208ENST00000490993 PDGFRBP09619 1106 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 TGM2P21980 687 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 SLC8A1P32418 973 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 TNFSF9P41273 254 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 GRM5P41594 1212 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 NDST1P52848 882 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 ASPHQ12797 758 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 DUSP28Q4G0W2 176 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 C2CD6Q53TS8 623 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 LRRC31Q6UY01 552 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 ZNF467Q7Z7K2 595 aaPredicted RBP7.69□□□□□ -1.18
NPHP3-208ENST00000490993 TLK2Q86UE8 772 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 TSEN2Q8NCE0 465 aaKnown RBP7.69□□□□□ -1.18
NPHP3-208ENST00000490993 MCUR1Q96AQ8 359 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 EPAS1Q99814 870 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 TRABDQ9H4I3 376 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.69□□□□□ -1.18
NPHP3-208ENST00000490993 KLHL8Q9P2G9 620 aaPredicted RBP7.69□□□□□ -1.18
NPHP3-208ENST00000490993 CPSF3Q9UKF6 684 aaKnown RBP7.69□□□□□ -1.18
NPHP3-208ENST00000490993 TTLL3Q9Y4R7 772 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms