RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 EXOC4Q96A65 974 aa21.14■□□□□ 0.97
SREBF1-216ENST00000490796 FNBP1Q96RU3 617 aa21.14■□□□□ 0.97
SREBF1-216ENST00000490796 TRPC7Q9HCX4 862 aa21.14■□□□□ 0.97
SREBF1-216ENST00000490796 SIX4Q9UIU6 781 aa21.14■□□□□ 0.97
SREBF1-216ENST00000490796 CHURC1-FNTBB4DL54 471 aa21.13■□□□□ 0.97
SREBF1-216ENST00000490796 FNTBP49356 437 aa21.13■□□□□ 0.97
SREBF1-216ENST00000490796 GRSF1Q12849 480 aaKnown RBP eCLIP21.13■□□□□ 0.97
SREBF1-216ENST00000490796 RUNX3Q13761 415 aa21.13■□□□□ 0.97
SREBF1-216ENST00000490796 SIM2Q14190 667 aaPredicted RBP21.13■□□□□ 0.97
SREBF1-216ENST00000490796 GAS6Q14393 721 aa21.13■□□□□ 0.97
SREBF1-216ENST00000490796 RSPO4Q2I0M5 234 aaPredicted RBP21.13■□□□□ 0.97
SREBF1-216ENST00000490796 FAM26FQ5R3K3 315 aa21.13■□□□□ 0.97
SREBF1-216ENST00000490796 HEATR6Q6AI08 1181 aaKnown RBP21.13■□□□□ 0.97
SREBF1-216ENST00000490796 LAIR1Q6GTX8 287 aa21.13■□□□□ 0.97
SREBF1-216ENST00000490796 TMEM150AQ86TG1 271 aa21.13■□□□□ 0.97
SREBF1-216ENST00000490796 OSTM1Q86WC4 334 aa21.13■□□□□ 0.97
SREBF1-216ENST00000490796 FSIP1Q8NA03 581 aa21.13■□□□□ 0.97
SREBF1-216ENST00000490796 GLIS3Q8NEA6 775 aa21.13■□□□□ 0.97
SREBF1-216ENST00000490796 OR5B17Q8NGF7 314 aa21.13■□□□□ 0.97
SREBF1-216ENST00000490796 USP13Q92995 863 aaPredicted RBP21.13■□□□□ 0.97
SREBF1-216ENST00000490796 FUBP3Q96I24 572 aaKnown RBP eCLIP21.13■□□□□ 0.97
SREBF1-216ENST00000490796 MMS19Q96T76 1030 aa21.13■□□□□ 0.97
SREBF1-216ENST00000490796 SYT15Q9BQS2 421 aa21.13■□□□□ 0.97
SREBF1-216ENST00000490796 MAGEC2Q9UBF1 373 aaPredicted RBP21.13■□□□□ 0.97
SREBF1-216ENST00000490796 CCL26Q9Y258 94 aa21.13■□□□□ 0.97
SREBF1-216ENST00000490796 NOL4O94818 638 aa21.12■□□□□ 0.97
SREBF1-216ENST00000490796 CKMP06732 381 aa21.12■□□□□ 0.97
SREBF1-216ENST00000490796 DLATP10515 647 aaKnown RBP21.12■□□□□ 0.97
SREBF1-216ENST00000490796 PDIA4P13667 645 aaKnown RBP21.12■□□□□ 0.97
SREBF1-216ENST00000490796 TNNI1P19237 187 aa21.12■□□□□ 0.97
SREBF1-216ENST00000490796 CNR2P34972 360 aa21.12■□□□□ 0.97
SREBF1-216ENST00000490796 LMNB2Q03252 620 aa21.12■□□□□ 0.97
SREBF1-216ENST00000490796 MAPRE1Q15691 268 aaKnown RBP21.12■□□□□ 0.97
SREBF1-216ENST00000490796 E2F4Q16254 413 aa21.12■□□□□ 0.97
SREBF1-216ENST00000490796 SOWAHAQ2M3V2 549 aa21.12■□□□□ 0.97
SREBF1-216ENST00000490796 FOXD4L6Q3SYB3 417 aaPredicted RBP21.12■□□□□ 0.97
SREBF1-216ENST00000490796 CFAP221Q4G0U5 840 aa21.12■□□□□ 0.97
SREBF1-216ENST00000490796 FOXD4L3Q6VB84 417 aaPredicted RBP21.12■□□□□ 0.97
SREBF1-216ENST00000490796 HS2ST1Q7LGA3 356 aa21.12■□□□□ 0.97
SREBF1-216ENST00000490796 LONP2Q86WA8 852 aa21.12■□□□□ 0.97
SREBF1-216ENST00000490796 WDR49Q8IV35 697 aa21.12■□□□□ 0.97
SREBF1-216ENST00000490796 HSCBQ8IWL3 235 aa21.12■□□□□ 0.97
SREBF1-216ENST00000490796 RDH13Q8NBN7 331 aa21.12■□□□□ 0.97
SREBF1-216ENST00000490796 CXorf38Q8TB03 319 aa21.12■□□□□ 0.97
SREBF1-216ENST00000490796 TRMT2BQ96GJ1 504 aaKnown RBP21.12■□□□□ 0.97
SREBF1-216ENST00000490796 EBF3Q9H4W6 596 aa21.12■□□□□ 0.97
SREBF1-216ENST00000490796 MAGEF1Q9HAY2 307 aa21.12■□□□□ 0.97
SREBF1-216ENST00000490796 FAM13BQ9NYF5 915 aa21.12■□□□□ 0.97
SREBF1-216ENST00000490796 CDH9Q9ULB4 789 aa21.12■□□□□ 0.97
SREBF1-216ENST00000490796 ZNF638Q14966 1978 aaKnown RBP21.11■□□□□ 0.97
SREBF1-216ENST00000490796 TRAV19A0A0A6YYK7 116 aa21.11■□□□□ 0.97
SREBF1-216ENST00000490796 PRR5-ARHGAP8B1AHC4 643 aa21.11■□□□□ 0.97
SREBF1-216ENST00000490796 GABRDO14764 452 aa21.11■□□□□ 0.97
SREBF1-216ENST00000490796 PAPSS2O95340 614 aaPredicted RBP21.11■□□□□ 0.97
SREBF1-216ENST00000490796 USP17L7P0C7H9 530 aa21.11■□□□□ 0.97
SREBF1-216ENST00000490796 CYP2J2P51589 502 aa21.11■□□□□ 0.97
SREBF1-216ENST00000490796 ARHGAP8P85298 464 aa21.11■□□□□ 0.97
SREBF1-216ENST00000490796 CCINQ13939 588 aa21.11■□□□□ 0.97
SREBF1-216ENST00000490796 ZNF268Q14587 947 aaPredicted RBP21.11■□□□□ 0.97
SREBF1-216ENST00000490796 PDGFRLQ15198 375 aa21.11■□□□□ 0.97
SREBF1-216ENST00000490796 SNRNP35Q16560 246 aaKnown RBP21.11■□□□□ 0.97
SREBF1-216ENST00000490796 TRIM68Q6AZZ1 485 aa21.11■□□□□ 0.97
SREBF1-216ENST00000490796 CEP68Q76N32 757 aa21.11■□□□□ 0.97
SREBF1-216ENST00000490796 ZNF507Q8TCN5 953 aa21.11■□□□□ 0.97
SREBF1-216ENST00000490796 FAM83CQ9BQN1 747 aa21.11■□□□□ 0.97
SREBF1-216ENST00000490796 SNX25Q9H3E2 840 aa21.11■□□□□ 0.97
SREBF1-216ENST00000490796 CDV3Q9UKY7 258 aaKnown RBP21.11■□□□□ 0.97
SREBF1-216ENST00000490796 DMXL1Q9Y485 3027 aa21.1■□□□□ 0.97
SREBF1-216ENST00000490796 DCHS1Q96JQ0 3298 aa21.1■□□□□ 0.97
SREBF1-216ENST00000490796 POLR2DO15514 142 aaKnown RBP21.1■□□□□ 0.97
SREBF1-216ENST00000490796 CLSTN1O94985 981 aa21.1■□□□□ 0.97
SREBF1-216ENST00000490796 PDGFRBP09619 1106 aa21.1■□□□□ 0.97
SREBF1-216ENST00000490796 ANXA13P27216 316 aa21.1■□□□□ 0.97
SREBF1-216ENST00000490796 GRIK1P39086 918 aa21.1■□□□□ 0.97
SREBF1-216ENST00000490796 MAGEA11P43364 429 aa21.1■□□□□ 0.97
SREBF1-216ENST00000490796 ME1P48163 572 aa21.1■□□□□ 0.97
SREBF1-216ENST00000490796 PSMC1P62191 440 aaKnown RBP21.1■□□□□ 0.97
SREBF1-216ENST00000490796 CYP27A1Q02318 531 aa21.1■□□□□ 0.97
SREBF1-216ENST00000490796 FAM160A1Q05DH4 1040 aa21.1■□□□□ 0.97
SREBF1-216ENST00000490796 SCARA3Q6AZY7 606 aa21.1■□□□□ 0.97
SREBF1-216ENST00000490796 SHC4Q6S5L8 630 aa21.1■□□□□ 0.97
SREBF1-216ENST00000490796 TRAPPC11Q7Z392 1133 aa21.1■□□□□ 0.97
SREBF1-216ENST00000490796 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.1■□□□□ 0.97
SREBF1-216ENST00000490796 NELFCDQ8IXH7 590 aa21.1■□□□□ 0.97
SREBF1-216ENST00000490796 CPA6Q8N4T0 437 aa21.1■□□□□ 0.97
SREBF1-216ENST00000490796 CCDC127Q96BQ5 260 aa21.1■□□□□ 0.97
SREBF1-216ENST00000490796 MYRFLQ96LU7 910 aa21.1■□□□□ 0.97
SREBF1-216ENST00000490796 PKMYT1Q99640 499 aa21.1■□□□□ 0.97
SREBF1-216ENST00000490796 C7orf25Q9BPX7 421 aa21.1■□□□□ 0.97
SREBF1-216ENST00000490796 AGPAT3Q9NRZ7 376 aa21.1■□□□□ 0.97
SREBF1-216ENST00000490796 DLL3Q9NYJ7 618 aa21.1■□□□□ 0.97
SREBF1-216ENST00000490796 UBE4BO95155 1302 aa21.09■□□□□ 0.97
SREBF1-216ENST00000490796 PTPRJQ12913 1337 aa21.09■□□□□ 0.97
SREBF1-216ENST00000490796 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.09■□□□□ 0.97
SREBF1-216ENST00000490796 CLIC2O15247 247 aa21.09■□□□□ 0.97
SREBF1-216ENST00000490796 HCRTO43612 131 aa21.09■□□□□ 0.97
SREBF1-216ENST00000490796 ATG13O75143 517 aa21.09■□□□□ 0.97
SREBF1-216ENST00000490796 RETP07949 1114 aa21.09■□□□□ 0.97
SREBF1-216ENST00000490796 IFNAR2P48551 515 aa21.09■□□□□ 0.97
SREBF1-216ENST00000490796 SNRPFP62306 86 aaKnown RBP21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms