RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 IGFBP6P24592 240 aaPredicted RBP11.61□□□□□ -0.55
VARS2-210ENST00000490699 BRD2P25440 801 aaKnown RBP11.61□□□□□ -0.55
VARS2-210ENST00000490699 ADORA2BP29275 332 aa11.61□□□□□ -0.55
VARS2-210ENST00000490699 CLCN1P35523 988 aa11.61□□□□□ -0.55
VARS2-210ENST00000490699 TUFMP49411 452 aaKnown RBP11.61□□□□□ -0.55
VARS2-210ENST00000490699 NUBP1P53384 320 aa11.61□□□□□ -0.55
VARS2-210ENST00000490699 CDK17Q00537 523 aa11.61□□□□□ -0.55
VARS2-210ENST00000490699 CDR2Q01850 454 aa11.61□□□□□ -0.55
VARS2-210ENST00000490699 GPR17Q13304 367 aa11.61□□□□□ -0.55
VARS2-210ENST00000490699 PLD1Q13393 1074 aa11.61□□□□□ -0.55
VARS2-210ENST00000490699 ARID5BQ14865 1188 aa11.61□□□□□ -0.55
VARS2-210ENST00000490699 SPA17Q15506 151 aa11.61□□□□□ -0.55
VARS2-210ENST00000490699 CNGA2Q16280 664 aa11.61□□□□□ -0.55
VARS2-210ENST00000490699 MEA1Q16626 185 aa11.61□□□□□ -0.55
VARS2-210ENST00000490699 GOLGA7BQ2TAP0 167 aa11.61□□□□□ -0.55
VARS2-210ENST00000490699 LIN9Q5TKA1 542 aa11.61□□□□□ -0.55
VARS2-210ENST00000490699 TAF3Q5VWG9 929 aa11.61□□□□□ -0.55
VARS2-210ENST00000490699 ARHGAP17Q68EM7 881 aa11.61□□□□□ -0.55
VARS2-210ENST00000490699 SLC8B1Q6J4K2 584 aa11.61□□□□□ -0.55
VARS2-210ENST00000490699 GLYCTKQ8IVS8 523 aa11.61□□□□□ -0.55
VARS2-210ENST00000490699 MRPL43Q8N983 215 aaKnown RBP11.61□□□□□ -0.55
VARS2-210ENST00000490699 TC2NQ8N9U0 490 aa11.61□□□□□ -0.55
VARS2-210ENST00000490699 TMEM35BQ8NCS4 154 aa11.61□□□□□ -0.55
VARS2-210ENST00000490699 OR10T2Q8NGX3 314 aa11.61□□□□□ -0.55
VARS2-210ENST00000490699 SLC2A14Q8TDB8 520 aa11.61□□□□□ -0.55
VARS2-210ENST00000490699 EPS8L1Q8TE68 723 aa11.61□□□□□ -0.55
VARS2-210ENST00000490699 IPO4Q8TEX9 1081 aaKnown RBP11.61□□□□□ -0.55
VARS2-210ENST00000490699 WHAMMQ8TF30 809 aa11.61□□□□□ -0.55
VARS2-210ENST00000490699 GDPD5Q8WTR4 605 aa11.61□□□□□ -0.55
VARS2-210ENST00000490699 MYLPFQ96A32 169 aa11.61□□□□□ -0.55
VARS2-210ENST00000490699 PDLIM2Q96JY6 352 aa11.61□□□□□ -0.55
VARS2-210ENST00000490699 TWNKQ96RR1 684 aa11.61□□□□□ -0.55
VARS2-210ENST00000490699 AGPAT1Q99943 283 aa11.61□□□□□ -0.55
VARS2-210ENST00000490699 VN1R3Q9BXE9 311 aa11.61□□□□□ -0.55
VARS2-210ENST00000490699 DPEP3Q9H4B8 488 aa11.61□□□□□ -0.55
VARS2-210ENST00000490699 HAUS4Q9H6D7 363 aa11.61□□□□□ -0.55
VARS2-210ENST00000490699 SYNCQ9H7C4 482 aa11.61□□□□□ -0.55
VARS2-210ENST00000490699 ABCB6Q9NP58 842 aa11.61□□□□□ -0.55
VARS2-210ENST00000490699 KRT82Q9NSB4 513 aa11.61□□□□□ -0.55
VARS2-210ENST00000490699 EHD2Q9NZN4 543 aa11.61□□□□□ -0.55
VARS2-210ENST00000490699 GTF3C4Q9UKN8 822 aa11.61□□□□□ -0.55
VARS2-210ENST00000490699 IRAK3Q9Y616 596 aa11.61□□□□□ -0.55
VARS2-210ENST00000490699 VWA8A3KMH1 1905 aa11.6□□□□□ -0.55
VARS2-210ENST00000490699 TRIM66O15016 1216 aa11.6□□□□□ -0.55
VARS2-210ENST00000490699 ATP2C2O75185 946 aa11.6□□□□□ -0.55
VARS2-210ENST00000490699 GLUD1P00367 558 aa11.6□□□□□ -0.55
VARS2-210ENST00000490699 CCDC130P13994 396 aa11.6□□□□□ -0.55
VARS2-210ENST00000490699 GRIK1P39086 918 aa11.6□□□□□ -0.55
VARS2-210ENST00000490699 NSFP46459 744 aaKnown RBP11.6□□□□□ -0.55
VARS2-210ENST00000490699 RPL10AP62906 217 aaKnown RBP11.6□□□□□ -0.55
VARS2-210ENST00000490699 ROR1Q01973 937 aa11.6□□□□□ -0.55
VARS2-210ENST00000490699 BST2Q10589 180 aaKnown RBP11.6□□□□□ -0.55
VARS2-210ENST00000490699 RAB33AQ14088 237 aa11.6□□□□□ -0.55
VARS2-210ENST00000490699 VEPH1Q14D04 833 aa11.6□□□□□ -0.55
VARS2-210ENST00000490699 TAF12Q16514 161 aa11.6□□□□□ -0.55
VARS2-210ENST00000490699 MGAT5BQ3V5L5 792 aa11.6□□□□□ -0.55
VARS2-210ENST00000490699 FAM171BQ6P995 826 aa11.6□□□□□ -0.55
VARS2-210ENST00000490699 LCLAT1Q6UWP7 414 aa11.6□□□□□ -0.55
VARS2-210ENST00000490699 VSTM1Q6UX27 236 aa11.6□□□□□ -0.55
VARS2-210ENST00000490699 CCDC149Q6ZUS6 474 aa11.6□□□□□ -0.55
VARS2-210ENST00000490699 FAM35AQ86V20 835 aa11.6□□□□□ -0.55
VARS2-210ENST00000490699 CCDC170Q8IYT3 715 aa11.6□□□□□ -0.55
VARS2-210ENST00000490699 ELMOD1Q8N336 334 aa11.6□□□□□ -0.55
VARS2-210ENST00000490699 ZNF461Q8TAF7 563 aa11.6□□□□□ -0.55
VARS2-210ENST00000490699 ZNF606Q8WXB4 792 aa11.6□□□□□ -0.55
VARS2-210ENST00000490699 AUTS2Q8WXX7 1259 aa11.6□□□□□ -0.55
VARS2-210ENST00000490699 MRPL38Q96DV4 380 aaKnown RBP11.6□□□□□ -0.55
VARS2-210ENST00000490699 PCED1BQ96HM7 432 aa11.6□□□□□ -0.55
VARS2-210ENST00000490699 GAS2L1Q99501 681 aaPredicted RBP11.6□□□□□ -0.55
VARS2-210ENST00000490699 CDCA3Q99618 268 aaPredicted RBP11.6□□□□□ -0.55
VARS2-210ENST00000490699 HNRNPABQ99729 332 aaKnown RBP11.6□□□□□ -0.55
VARS2-210ENST00000490699 ZNF518BQ9C0D4 1074 aa11.6□□□□□ -0.55
VARS2-210ENST00000490699 TLE6Q9H808 572 aa11.6□□□□□ -0.55
VARS2-210ENST00000490699 RXFP1Q9HBX9 757 aa11.6□□□□□ -0.55
VARS2-210ENST00000490699 DMAP1Q9NPF5 467 aaPredicted RBP11.6□□□□□ -0.55
VARS2-210ENST00000490699 CRTAC1Q9NQ79 661 aa11.6□□□□□ -0.55
VARS2-210ENST00000490699 HSFX1Q9UBD0 423 aa11.6□□□□□ -0.55
VARS2-210ENST00000490699 AFF4Q9UHB7 1163 aaKnown RBP11.6□□□□□ -0.55
VARS2-210ENST00000490699 TSPAN16Q9UKR8 245 aa11.6□□□□□ -0.55
VARS2-210ENST00000490699 PCDHGC3Q9UN70 934 aa11.6□□□□□ -0.55
VARS2-210ENST00000490699 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.6□□□□□ -0.55
VARS2-210ENST00000490699 TNRC18O15417 2968 aaPredicted RBP11.6□□□□□ -0.55
VARS2-210ENST00000490699 MYBPHLA2RUH7 354 aa11.59□□□□□ -0.55
VARS2-210ENST00000490699 C2orf71A6NGG8 1288 aa11.59□□□□□ -0.55
VARS2-210ENST00000490699 RNF225M0QZC1 329 aaPredicted RBP11.59□□□□□ -0.55
VARS2-210ENST00000490699 O00370 1275 aa11.59□□□□□ -0.55
VARS2-210ENST00000490699 TEX28O15482 410 aa11.59□□□□□ -0.55
VARS2-210ENST00000490699 AP1G2O75843 785 aa11.59□□□□□ -0.55
VARS2-210ENST00000490699 MICAL2O94851 1124 aa11.59□□□□□ -0.55
VARS2-210ENST00000490699 ARHGEF15O94989 841 aa11.59□□□□□ -0.55
VARS2-210ENST00000490699 C1RP00736 705 aa11.59□□□□□ -0.55
VARS2-210ENST00000490699 CNPP09543 421 aaKnown RBP11.59□□□□□ -0.55
VARS2-210ENST00000490699 OR4Q2P0C623 313 aa11.59□□□□□ -0.55
VARS2-210ENST00000490699 SKILP12757 684 aa11.59□□□□□ -0.55
VARS2-210ENST00000490699 NPR3P17342 541 aa11.59□□□□□ -0.55
VARS2-210ENST00000490699 RPL17P18621 184 aaKnown RBP11.59□□□□□ -0.55
VARS2-210ENST00000490699 ALDH1A3P47895 512 aa11.59□□□□□ -0.55
VARS2-210ENST00000490699 ERVFC1P60507 584 aa11.59□□□□□ -0.55
VARS2-210ENST00000490699 ADCY1Q08828 1119 aa11.59□□□□□ -0.55
VARS2-210ENST00000490699 GOLGA8FQ08AF8 430 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms